| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is glnH [H]
Identifier: 145296749
GI number: 145296749
Start: 2935048
End: 2936082
Strand: Direct
Name: glnH [H]
Synonym: cgR_2653
Alternate gene names: 145296749
Gene position: 2935048-2936082 (Clockwise)
Preceding gene: 145296748
Following gene: 145296750
Centisome position: 88.56
GC content: 54.11
Gene sequence:
>1035_bases ATGCACGCTTTTCGACGCCCCCCTCCACTCACCACGCGAGTCGGCGCTGCATTGCTGGCCGCAACGCTGCTTGCTTCCTG CACTCCAACACCTGTGGAACCGGCAGAAACCTTGACTGCTTTGGATCCCGATGCCGGTCCACCACTGCCACCGGATTCTT CGATTGAAGCTCCCGGTGAAAAAGAGCCCATAGTGGAAGCAATAGAGAATTGGCCAGGTTCTTTACGCCCGGATGATCTG ACCCCTGAGGAGCGGGTACCTGGCATCGTCAACCGGGGTCGCATCATTGTGGGTGTGGATCAATCGCAAAACTTGCTCAG TTTCCGTGATCCGGTGACTGGTGAGCTGCGCGGTTTTGAAGTGGAATTAGCGAGGGAAATTTCCCGTGACATTTTCGGTG ACCCCAATAAGGTGGATTTCCGATTCGTCGGCTCGTCCGACCGTCTGCGTTCCCTTGACCAAGGTGATGTAGATATTGTG ATTCGTTCCGTCACGATCACCGACGAACGCGCCAAATTGGTGGAATTTTCCACACCGTACCTGCGCACCCAAACCCGCAT GTTGACCATGGAATCTTCAGGAATCACGTCCATCGCAGATCTACCCGGCCACACCATTTGTGTCACCGATGGCTCCACTT CATTGCAGCGAGCCCGCACCATTGCGCCGGAGGCCTCAATCTTAAAAACTCGCAATTGGTCCGATTGTCTCATGGCGTTG CAGCAGCATCAGGCTCAGGTCATTTTGGGCGATGATGTCATTTTATCCGGCATCGCAGCACAGGATCCCTACACCGAGAT TCTTGATACCTCCCTCGATTCCCATTCCTATGGAGTGGCAGCGGCATCGACCACTGCTGAAACAGACTCTTCGGGGTTGA TTCGGCAGGTAAACTACACAATTGAACGGATCCGCACAGACCGCATGTGGTGGACAATGTTCGACGATTGGTTCGGACCT TATCTCTGGTCCTACGGTCCACCACCACTGCAGTACATGCCTGAGGAAGAAGGGACAGAAAACGATGAAGGATAA
Upstream 100 bases:
>100_bases GGCCACGGAGTTGGTGTCCGTCATGGTGATGCTGCTGTCTGTCGTTTCTGTGTTGGCTTTGTGGGTCGGCATCCGCCCCC GTTTGCAGGAGTACTTATAA
Downstream 100 bases:
>100_bases TGAAGATTTCGATCCAGATTCACCAGCAACCGAAGCTGTTGCCTTCAACCCTTTCGACGACGATGAGGATGACTCCTCCG CCACATCAGCCGTTGCCTTC
Product: hypothetical protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: GlnBP [H]
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MHAFRRPPPLTTRVGAALLAATLLASCTPTPVEPAETLTALDPDAGPPLPPDSSIEAPGEKEPIVEAIENWPGSLRPDDL TPEERVPGIVNRGRIIVGVDQSQNLLSFRDPVTGELRGFEVELAREISRDIFGDPNKVDFRFVGSSDRLRSLDQGDVDIV IRSVTITDERAKLVEFSTPYLRTQTRMLTMESSGITSIADLPGHTICVTDGSTSLQRARTIAPEASILKTRNWSDCLMAL QQHQAQVILGDDVILSGIAAQDPYTEILDTSLDSHSYGVAAASTTAETDSSGLIRQVNYTIERIRTDRMWWTMFDDWFGP YLWSYGPPPLQYMPEEEGTENDEG
Sequences:
>Translated_344_residues MHAFRRPPPLTTRVGAALLAATLLASCTPTPVEPAETLTALDPDAGPPLPPDSSIEAPGEKEPIVEAIENWPGSLRPDDL TPEERVPGIVNRGRIIVGVDQSQNLLSFRDPVTGELRGFEVELAREISRDIFGDPNKVDFRFVGSSDRLRSLDQGDVDIV IRSVTITDERAKLVEFSTPYLRTQTRMLTMESSGITSIADLPGHTICVTDGSTSLQRARTIAPEASILKTRNWSDCLMAL QQHQAQVILGDDVILSGIAAQDPYTEILDTSLDSHSYGVAAASTTAETDSSGLIRQVNYTIERIRTDRMWWTMFDDWFGP YLWSYGPPPLQYMPEEEGTENDEG >Mature_344_residues MHAFRRPPPLTTRVGAALLAATLLASCTPTPVEPAETLTALDPDAGPPLPPDSSIEAPGEKEPIVEAIENWPGSLRPDDL TPEERVPGIVNRGRIIVGVDQSQNLLSFRDPVTGELRGFEVELAREISRDIFGDPNKVDFRFVGSSDRLRSLDQGDVDIV IRSVTITDERAKLVEFSTPYLRTQTRMLTMESSGITSIADLPGHTICVTDGSTSLQRARTIAPEASILKTRNWSDCLMAL QQHQAQVILGDDVILSGIAAQDPYTEILDTSLDSHSYGVAAASTTAETDSSGLIRQVNYTIERIRTDRMWWTMFDDWFGP YLWSYGPPPLQYMPEEEGTENDEG
Specific function: Involved in glutamine-transport system. Interacts with the glutamine-transport system glnPQ [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787031, Length=207, Percent_Identity=24.1545893719807, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1788228, Length=240, Percent_Identity=25.8333333333333, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1787085, Length=206, Percent_Identity=20.873786407767, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 37869; Mature: 37869
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAFRRPPPLTTRVGAALLAATLLASCTPTPVEPAETLTALDPDAGPPLPPDSSIEAPGE CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCCCCC KEPIVEAIENWPGSLRPDDLTPEERVPGIVNRGRIIVGVDQSQNLLSFRDPVTGELRGFE CCHHHHHHHCCCCCCCCCCCCCHHHCCCCHHCCEEEEEECCCCCCHHHCCCCCCCCCCCH VELAREISRDIFGDPNKVDFRFVGSSDRLRSLDQGDVDIVIRSVTITDERAKLVEFSTPY HHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCCCEEEEEEEEEECCCHHHEEECCCCC LRTQTRMLTMESSGITSIADLPGHTICVTDGSTSLQRARTIAPEASILKTRNWSDCLMAL HHHHEEEEEEECCCCCCHHCCCCCEEEEECCCHHHHHHHHCCCCHHHHCCCCHHHHHHHH QQHQAQVILGDDVILSGIAAQDPYTEILDTSLDSHSYGVAAASTTAETDSSGLIRQVNYT HHCCCEEEECCHHEEECCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHH IERIRTDRMWWTMFDDWFGPYLWSYGPPPLQYMPEEEGTENDEG HHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHAFRRPPPLTTRVGAALLAATLLASCTPTPVEPAETLTALDPDAGPPLPPDSSIEAPGE CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCCCCCCCCCCCCCCCC KEPIVEAIENWPGSLRPDDLTPEERVPGIVNRGRIIVGVDQSQNLLSFRDPVTGELRGFE CCHHHHHHHCCCCCCCCCCCCCHHHCCCCHHCCEEEEEECCCCCCHHHCCCCCCCCCCCH VELAREISRDIFGDPNKVDFRFVGSSDRLRSLDQGDVDIVIRSVTITDERAKLVEFSTPY HHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCCCEEEEEEEEEECCCHHHEEECCCCC LRTQTRMLTMESSGITSIADLPGHTICVTDGSTSLQRARTIAPEASILKTRNWSDCLMAL HHHHEEEEEEECCCCCCHHCCCCCEEEEECCCHHHHHHHHCCCCHHHHCCCCHHHHHHHH QQHQAQVILGDDVILSGIAAQDPYTEILDTSLDSHSYGVAAASTTAETDSSGLIRQVNYT HHCCCEEEECCHHEEECCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCHHHHHH IERIRTDRMWWTMFDDWFGPYLWSYGPPPLQYMPEEEGTENDEG HHHHHHCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1856180 [H]