| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145296680
Identifier: 145296680
GI number: 145296680
Start: 2856353
End: 2857186
Strand: Reverse
Name: 145296680
Synonym: cgR_2585
Alternate gene names: NA
Gene position: 2857186-2856353 (Counterclockwise)
Preceding gene: 145296681
Following gene: 145296677
Centisome position: 86.21
GC content: 61.99
Gene sequence:
>834_bases GTGCCTGCCGTCCCATCATCCATCATCGAACCTATCTGGGACCAATTCGCCGCGCTGATCCCACCGATCATCGACACCCA CCCGCTGGGATGCCACCGTCTACGGATCGCTGACCGGATCATCTTCGACAAGCTCATCCAGGTTCTCGTCCTCGGCGCCT CCTACACCAAGATCTCCGATTCCACGTGTTCAGCGACCACGCTGCGCACCCGCCGGGATGAGTGGATCACCACCGGCATC TTCTACACGCTGGAGCAGATCTGCCTGGAGTTCTACGACCGGATCATCGGACTCGAGCTGGACAACTTAAGCGTCGACGG GTGTATTGTCAAAGCCCCCTGTGGCGGGGAAGTCGCGGGCCGTTCCCCGGTTGACCGGGGAAAACAAGGAACCAAACGCT CTCTGATGGTCGACGGCGCAGGTATCCCGATCGGGTGCGTGGTGGCGGGAGCCAACCGGCATGACTCGCCGTTGCTGCGC CCCACCCTGGACAAGCTCGGCCGGTTCGGGTTCGATCTGCCTGAGGCGATCACGGTGCATCTGGATGCCGGTTATGACTC GAAGAAGACGAGGAGCCTGCTGGAAGAACTTGGTTGTGACGGGGTGATCAGTACCAAGGGTGAGCCCTTGCAGGCTGGGG GCCGGTGGGTGGTGGAGCGGACGAATTCGTGGCATAACCGTGGCTTCAAGAAACTGGCACTTTGTACTGAGCGGCGGGCC CGGGTCGTGGAGGCGTTTATCGCGTTGGCGAACGCGGTCATCATCGTGCGTCGGCTCATCCGGCAGGCCTGGACCAGCTA TCGCTGTGATACCCGGCCTGCCCGCCGACCATGA
Upstream 100 bases:
>100_bases GCGGATAGGGCGGTTGCGGTGAGGTGATAAACGAGGGCAGGCACGAGACCTGGTACATACGGATTCGACCAAGAAAACGT AAAATATCTCAGGAGCACTC
Downstream 100 bases:
>100_bases CACCTATCCACGCAATCTCTAAGAAGAAATCTTAAGACTTTTCGAGTTCTTCGACCTGTACTCGGTTAGGTAACAGTGGA CCTACTGCTCATTTTGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MPAVPSSIIEPIWDQFAALIPPIIDTHPLGCHRLRIADRIIFDKLIQVLVLGASYTKISDSTCSATTLRTRRDEWITTGI FYTLEQICLEFYDRIIGLELDNLSVDGCIVKAPCGGEVAGRSPVDRGKQGTKRSLMVDGAGIPIGCVVAGANRHDSPLLR PTLDKLGRFGFDLPEAITVHLDAGYDSKKTRSLLEELGCDGVISTKGEPLQAGGRWVVERTNSWHNRGFKKLALCTERRA RVVEAFIALANAVIIVRRLIRQAWTSYRCDTRPARRP
Sequences:
>Translated_277_residues MPAVPSSIIEPIWDQFAALIPPIIDTHPLGCHRLRIADRIIFDKLIQVLVLGASYTKISDSTCSATTLRTRRDEWITTGI FYTLEQICLEFYDRIIGLELDNLSVDGCIVKAPCGGEVAGRSPVDRGKQGTKRSLMVDGAGIPIGCVVAGANRHDSPLLR PTLDKLGRFGFDLPEAITVHLDAGYDSKKTRSLLEELGCDGVISTKGEPLQAGGRWVVERTNSWHNRGFKKLALCTERRA RVVEAFIALANAVIIVRRLIRQAWTSYRCDTRPARRP >Mature_276_residues PAVPSSIIEPIWDQFAALIPPIIDTHPLGCHRLRIADRIIFDKLIQVLVLGASYTKISDSTCSATTLRTRRDEWITTGIF YTLEQICLEFYDRIIGLELDNLSVDGCIVKAPCGGEVAGRSPVDRGKQGTKRSLMVDGAGIPIGCVVAGANRHDSPLLRP TLDKLGRFGFDLPEAITVHLDAGYDSKKTRSLLEELGCDGVISTKGEPLQAGGRWVVERTNSWHNRGFKKLALCTERRAR VVEAFIALANAVIIVRRLIRQAWTSYRCDTRPARRP
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG3293
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 11 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 30663; Mature: 30532
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAVPSSIIEPIWDQFAALIPPIIDTHPLGCHRLRIADRIIFDKLIQVLVLGASYTKISD CCCCCHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC STCSATTLRTRRDEWITTGIFYTLEQICLEFYDRIIGLELDNLSVDGCIVKAPCGGEVAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCC RSPVDRGKQGTKRSLMVDGAGIPIGCVVAGANRHDSPLLRPTLDKLGRFGFDLPEAITVH CCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEE LDAGYDSKKTRSLLEELGCDGVISTKGEPLQAGGRWVVERTNSWHNRGFKKLALCTERRA EECCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECCCCHHHCCHHHHHHHHHHHH RVVEAFIALANAVIIVRRLIRQAWTSYRCDTRPARRP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PAVPSSIIEPIWDQFAALIPPIIDTHPLGCHRLRIADRIIFDKLIQVLVLGASYTKISD CCCCHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC STCSATTLRTRRDEWITTGIFYTLEQICLEFYDRIIGLELDNLSVDGCIVKAPCGGEVAG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCC RSPVDRGKQGTKRSLMVDGAGIPIGCVVAGANRHDSPLLRPTLDKLGRFGFDLPEAITVH CCCCCCCCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEE LDAGYDSKKTRSLLEELGCDGVISTKGEPLQAGGRWVVERTNSWHNRGFKKLALCTERRA EECCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECCCCHHHCCHHHHHHHHHHHH RVVEAFIALANAVIIVRRLIRQAWTSYRCDTRPARRP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1650732 [H]