| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145296627
Identifier: 145296627
GI number: 145296627
Start: 2801012
End: 2801950
Strand: Direct
Name: 145296627
Synonym: cgR_2535
Alternate gene names: NA
Gene position: 2801012-2801950 (Clockwise)
Preceding gene: 145296625
Following gene: 145296628
Centisome position: 84.52
GC content: 54.1
Gene sequence:
>939_bases ATGGCAGATATGAAAAAGCTTCTTTGGACACTCCCCATCCTCCCACTGGTACTAGCTGGCTGCTCAACCGGTTCAGCAGA TTCCGCAGATTCCACCAACACTGCTGGAGCCGATTCCCTTAAAGTGGTCACCTCCACCCAGGTGTGGGCTGACGTCGCCG AAGCTGTCGCCCCAGATGTAGACATTGAAGCAATTATTACCGGTGGCGACATCGACCCCCACTCCTTCGAGCCTTCCGCT ACCGATATGGCTAAAGTTTCCGAAGCTGACATCATTATCGTCGGTGGCGGCGGTTACGACTCCTGGCTCTACGGCACCTT GGAAGACGATGATCGCATCATCCACGCATTGGATCTCTCAGAGCATGACCACAGCGAGCACGAAGCCGAAGAAGCCCACG ATCACGACCACGAAGAAGAGGGCCACGATCATGACGTCGACAACGAGCACGTCTGGTACTCCACCGAATACGTCTCTGAG GTAGCTGAAGAGTTCGCAGAAAAAGTCATCGAGCTTGATCCCGAGGCACAGGCCGATGCAACGGCTGTGACCACCAAGAT GGACGAGCTGCACAATCAGATTCACGATCTTCCAGCAGTTCGCATTGCTCAGACCGAGCCGATCGCCGATCACATTTTGT CCCACTCCGACATGGTGGAATCCACCCCTGAGGGTTACCGCGCAACCACATTGAGCGAGAGCGAGCCAACCGCAGCAGAT GTTGCGGCGTTCCAGGATGCAATTAATAACGGTGACATCGATGTTTTGATCTACAACCCACAGTCCGCGTCGACTGTCGC GACCAGCTTGAAGGATTTGGCGGAAGAAAAAGGCATCCCAGTTGTTGAGATCTATGAGACCCCTCAAAACACCGAGAATT TCCTCGATGCATTCACCAAGGCAGTTGAAGATCTCACCGCTGCCGCTAACCAGGTTTAG
Upstream 100 bases:
>100_bases TTCAATCTACCAGTTACCCCTATGGCGTATCCGAGGTCTAACGCGATTTTGCTATTTTCAATAAGTTTTCATGTTGACAG CTGTTTTCAATAAGCATTTA
Downstream 100 bases:
>100_bases AATTATTTAAATGCTGTTGACTTTCACTGATGCTGCAGTGGATCCCCTCTGGAAGGACTTGAATTTAGAGCTCCGACAGG GGGAATTTCTTGCGGTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MADMKKLLWTLPILPLVLAGCSTGSADSADSTNTAGADSLKVVTSTQVWADVAEAVAPDVDIEAIITGGDIDPHSFEPSA TDMAKVSEADIIIVGGGGYDSWLYGTLEDDDRIIHALDLSEHDHSEHEAEEAHDHDHEEEGHDHDVDNEHVWYSTEYVSE VAEEFAEKVIELDPEAQADATAVTTKMDELHNQIHDLPAVRIAQTEPIADHILSHSDMVESTPEGYRATTLSESEPTAAD VAAFQDAINNGDIDVLIYNPQSASTVATSLKDLAEEKGIPVVEIYETPQNTENFLDAFTKAVEDLTAAANQV
Sequences:
>Translated_312_residues MADMKKLLWTLPILPLVLAGCSTGSADSADSTNTAGADSLKVVTSTQVWADVAEAVAPDVDIEAIITGGDIDPHSFEPSA TDMAKVSEADIIIVGGGGYDSWLYGTLEDDDRIIHALDLSEHDHSEHEAEEAHDHDHEEEGHDHDVDNEHVWYSTEYVSE VAEEFAEKVIELDPEAQADATAVTTKMDELHNQIHDLPAVRIAQTEPIADHILSHSDMVESTPEGYRATTLSESEPTAAD VAAFQDAINNGDIDVLIYNPQSASTVATSLKDLAEEKGIPVVEIYETPQNTENFLDAFTKAVEDLTAAANQV >Mature_311_residues ADMKKLLWTLPILPLVLAGCSTGSADSADSTNTAGADSLKVVTSTQVWADVAEAVAPDVDIEAIITGGDIDPHSFEPSAT DMAKVSEADIIIVGGGGYDSWLYGTLEDDDRIIHALDLSEHDHSEHEAEEAHDHDHEEEGHDHDVDNEHVWYSTEYVSEV AEEFAEKVIELDPEAQADATAVTTKMDELHNQIHDLPAVRIAQTEPIADHILSHSDMVESTPEGYRATTLSESEPTAADV AAFQDAINNGDIDVLIYNPQSASTVATSLKDLAEEKGIPVVEIYETPQNTENFLDAFTKAVEDLTAAANQV
Specific function: Unknown
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33686; Mature: 33554
Theoretical pI: Translated: 3.82; Mature: 3.82
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADMKKLLWTLPILPLVLAGCSTGSADSADSTNTAGADSLKVVTSTQVWADVAEAVAPDV CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCC DIEAIITGGDIDPHSFEPSATDMAKVSEADIIIVGGGGYDSWLYGTLEDDDRIIHALDLS CEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCEEEEECCC EHDHSEHEAEEAHDHDHEEEGHDHDVDNEHVWYSTEYVSEVAEEFAEKVIELDPEAQADA CCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCH TAVTTKMDELHNQIHDLPAVRIAQTEPIADHILSHSDMVESTPEGYRATTLSESEPTAAD HHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCHHHHHHCCCCCCEEEECCCCCCCHHH VAAFQDAINNGDIDVLIYNPQSASTVATSLKDLAEEKGIPVVEIYETPQNTENFLDAFTK HHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH AVEDLTAAANQV HHHHHHHHHCCC >Mature Secondary Structure ADMKKLLWTLPILPLVLAGCSTGSADSADSTNTAGADSLKVVTSTQVWADVAEAVAPDV CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCC DIEAIITGGDIDPHSFEPSATDMAKVSEADIIIVGGGGYDSWLYGTLEDDDRIIHALDLS CEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCEEEEECCC EHDHSEHEAEEAHDHDHEEEGHDHDVDNEHVWYSTEYVSEVAEEFAEKVIELDPEAQADA CCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCH TAVTTKMDELHNQIHDLPAVRIAQTEPIADHILSHSDMVESTPEGYRATTLSESEPTAAD HHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCHHHHHHCCCCCCEEEECCCCCCCHHH VAAFQDAINNGDIDVLIYNPQSASTVATSLKDLAEEKGIPVVEIYETPQNTENFLDAFTK HHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH AVEDLTAAANQV HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA