| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is ykrA [H]
Identifier: 145296619
GI number: 145296619
Start: 2793382
End: 2794197
Strand: Reverse
Name: ykrA [H]
Synonym: cgR_2527
Alternate gene names: 145296619
Gene position: 2794197-2793382 (Counterclockwise)
Preceding gene: 145296620
Following gene: 145296617
Centisome position: 84.31
GC content: 55.88
Gene sequence:
>816_bases ATGGGAAAGTTACTTTTCGTAGACATCGGTGGCACACTGCTGGATTACTCAAATGAAGTTCCGCGTTCGGCCGTTGACGC GATCCGTAAGGCACGCGCCAAAGGACACCGCGTGTACTTGAGCTCTGGTCGAAGCAGCGCTGAGGTGACTTCTCAGTTGT GGGATATCGGAGTGGATGGCCTCATTGGCGCAAATGGTGGATATGTGGAAAGCGCACAGGAGTCTGTGTTCCACCGCCGT TTGTCGGGTGAGGAGACCCGCCACATTGTGGAGTGGCTCTACAACCGTGGTTTGGAGTTTTATCTCGAGTCCAACAACGG TTTGTATGCAAGCCGTGGTTTCCGTGAGGCTTCTAAGCCAGTGCTGTCTCGCCTTTCGGAGAAGACCGACGTGACAGTCG ATAGCATGTACCCGGATATGTTCTGGGGCGCGAGCCTTGATCGTGACGATGTGAACAAGATCAGTTACATCTTCAATTCT CAGGAAGATTTGGACGCAGCGCGTGAGGCGTTCCCTAACCTGGAGCACACCACGTGGGGTGGCCAGACGGGTGCGTTGTT CGGCACGATCGGTGTCTCTGTCAACAAGAAGATCGGCGTGGATCGCCTGCTGAAGTACCTGAACGCAGATCGCGCAAACA CCATTGCGTTCGGCGACAGCGATGAGGATCTCTCCCTATTTGAGGCGAGCGCTTACGGCGTCGCGATGGGCGAGGCCACC GAATCGCTCAAGGCCGCTGCTGACCTGGTCACGGATGCTGTTGGGCAGGACGGCTTGCGCAATGCGTTTTTAAAGCTGGA GCTTATCGACGCCTGA
Upstream 100 bases:
>100_bases GCTTGTCGGTAAGGCTGCAGGGTAGCAGGAGTTTCTTTTTAGATTGGAAGTTCTTTAATTTCCTCGATTATGTACCTCAT TTACGCGTAAAGTTTGGGGC
Downstream 100 bases:
>100_bases CCCCATCAAAGAACTTCCCAATCTCCTCAGCCGCTATCACTGATGTGGTTGAGGGGCCTAGAAATTCTGGATAAGTTTTC CCACTTGGTACCAAGTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 270
Protein sequence:
>271_residues MGKLLFVDIGGTLLDYSNEVPRSAVDAIRKARAKGHRVYLSSGRSSAEVTSQLWDIGVDGLIGANGGYVESAQESVFHRR LSGEETRHIVEWLYNRGLEFYLESNNGLYASRGFREASKPVLSRLSEKTDVTVDSMYPDMFWGASLDRDDVNKISYIFNS QEDLDAAREAFPNLEHTTWGGQTGALFGTIGVSVNKKIGVDRLLKYLNADRANTIAFGDSDEDLSLFEASAYGVAMGEAT ESLKAAADLVTDAVGQDGLRNAFLKLELIDA
Sequences:
>Translated_271_residues MGKLLFVDIGGTLLDYSNEVPRSAVDAIRKARAKGHRVYLSSGRSSAEVTSQLWDIGVDGLIGANGGYVESAQESVFHRR LSGEETRHIVEWLYNRGLEFYLESNNGLYASRGFREASKPVLSRLSEKTDVTVDSMYPDMFWGASLDRDDVNKISYIFNS QEDLDAAREAFPNLEHTTWGGQTGALFGTIGVSVNKKIGVDRLLKYLNADRANTIAFGDSDEDLSLFEASAYGVAMGEAT ESLKAAADLVTDAVGQDGLRNAFLKLELIDA >Mature_270_residues GKLLFVDIGGTLLDYSNEVPRSAVDAIRKARAKGHRVYLSSGRSSAEVTSQLWDIGVDGLIGANGGYVESAQESVFHRRL SGEETRHIVEWLYNRGLEFYLESNNGLYASRGFREASKPVLSRLSEKTDVTVDSMYPDMFWGASLDRDDVNKISYIFNSQ EDLDAAREAFPNLEHTTWGGQTGALFGTIGVSVNKKIGVDRLLKYLNADRANTIAFGDSDEDLSLFEASAYGVAMGEATE SLKAAADLVTDAVGQDGLRNAFLKLELIDA
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR000150 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 29651; Mature: 29520
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLLFVDIGGTLLDYSNEVPRSAVDAIRKARAKGHRVYLSSGRSSAEVTSQLWDIGVDG CCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCC LIGANGGYVESAQESVFHRRLSGEETRHIVEWLYNRGLEFYLESNNGLYASRGFREASKP EECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCCEEECCCCHHHHHH VLSRLSEKTDVTVDSMYPDMFWGASLDRDDVNKISYIFNSQEDLDAAREAFPNLEHTTWG HHHHHHHHCCCCHHHHCCHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC GQTGALFGTIGVSVNKKIGVDRLLKYLNADRANTIAFGDSDEDLSLFEASAYGVAMGEAT CCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHEEHHHHH ESLKAAADLVTDAVGQDGLRNAFLKLELIDA HHHHHHHHHHHHHHCCCHHHHHEEEEEEECC >Mature Secondary Structure GKLLFVDIGGTLLDYSNEVPRSAVDAIRKARAKGHRVYLSSGRSSAEVTSQLWDIGVDG CCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCC LIGANGGYVESAQESVFHRRLSGEETRHIVEWLYNRGLEFYLESNNGLYASRGFREASKP EECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCCEEECCCCHHHHHH VLSRLSEKTDVTVDSMYPDMFWGASLDRDDVNKISYIFNSQEDLDAAREAFPNLEHTTWG HHHHHHHHCCCCHHHHCCHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCC GQTGALFGTIGVSVNKKIGVDRLLKYLNADRANTIAFGDSDEDLSLFEASAYGVAMGEAT CCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHEEHHHHH ESLKAAADLVTDAVGQDGLRNAFLKLELIDA HHHHHHHHHHHHHHCCCHHHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]