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The map label for this gene is yqfA [C]

Identifier: 145296582

GI number: 145296582

Start: 2748135

End: 2748899

Strand: Reverse

Name: yqfA [C]

Synonym: cgR_2490

Alternate gene names: 145296582

Gene position: 2748899-2748135 (Counterclockwise)

Preceding gene: 145296583

Following gene: 145296580

Centisome position: 82.94

GC content: 55.95

Gene sequence:

>765_bases
GTGTCTGAAGATCGTGAATATATGGACGCAGACCCGCTGATTGAGGATGACGTTAGTGGAGCAGAAGTAAAAGACAGTTC
GGATGAACCGCTTCTCGCACTGACACGTTACGTTTTTGATCGCGGTGAGCGACCAGTAACCCGTGGTCTCTTCCACCAGG
TTGCGGCCATTTTGAGTATTGTGTCCGGTTCGGTGCTCTCCACGTACGCATGGATGGAACTGGTGTGGTGGCAGGCGCTA
GGTGTCATGGTGTACGCCTTGGCCATGCTGGGACTGTTTGCTGTCTCTGCGGCGTATCACCGAGGACCGTGGCGTAGATT
GCACACCGTGGCGTGGTGGCGCAAAGCTGATCACTCCACCATCGCGGTGTTTATCGCAGCAACCTATACGCCACTGTGCT
TGATCGTTTTAGAGCTCGGGACCGCCATCTGGATGTTGAGCATCGCCTGGGCGGGAGCGATAGGCAGCGTGGTCATGAAC
ATGGTGTGGATCAATCATCCGCGATGGCTCAGCGTACTGGTGTACCTGGCGCTGGGATGGCTTATTGTGCCACTAATCCC
TCAACTATGGTCGGGCGCTGGACACACTGTGGTGTGGCTCCTGCTGGCCGGAGGCATCGTCTACAGCGTTGGCGCGTTGG
TGTACGGCTTTAAATGGCCAGGACGCAACGCACGAGTGATTGGCTACCACGAGCACTTCCACATTGCCACGATCATCGCA
GCGATTGTCCATCTGGTTGCCGTGTGGATGGTCGTCGTTAATTAA

Upstream 100 bases:

>100_bases
TTTTCTGCTGTGAAGCCGGGTTTCGTTTACGCGAAGCCCGGCTTCTGCTCTTTCTTCCACTAGATTGGATACAACAATTC
AGGGAAGAAAGAAGCGTGAA

Downstream 100 bases:

>100_bases
GAAAAGCCCCCTTTTTACAAAATGGGGCTTTTCTGGGGTTTTAACTAGTCAATCTGCAGTGGAACCCTGCGCTGGAACAG
CGGCATCGGGGTGTAATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSEDREYMDADPLIEDDVSGAEVKDSSDEPLLALTRYVFDRGERPVTRGLFHQVAAILSIVSGSVLSTYAWMELVWWQAL
GVMVYALAMLGLFAVSAAYHRGPWRRLHTVAWWRKADHSTIAVFIAATYTPLCLIVLELGTAIWMLSIAWAGAIGSVVMN
MVWINHPRWLSVLVYLALGWLIVPLIPQLWSGAGHTVVWLLLAGGIVYSVGALVYGFKWPGRNARVIGYHEHFHIATIIA
AIVHLVAVWMVVVN

Sequences:

>Translated_254_residues
MSEDREYMDADPLIEDDVSGAEVKDSSDEPLLALTRYVFDRGERPVTRGLFHQVAAILSIVSGSVLSTYAWMELVWWQAL
GVMVYALAMLGLFAVSAAYHRGPWRRLHTVAWWRKADHSTIAVFIAATYTPLCLIVLELGTAIWMLSIAWAGAIGSVVMN
MVWINHPRWLSVLVYLALGWLIVPLIPQLWSGAGHTVVWLLLAGGIVYSVGALVYGFKWPGRNARVIGYHEHFHIATIIA
AIVHLVAVWMVVVN
>Mature_253_residues
SEDREYMDADPLIEDDVSGAEVKDSSDEPLLALTRYVFDRGERPVTRGLFHQVAAILSIVSGSVLSTYAWMELVWWQALG
VMVYALAMLGLFAVSAAYHRGPWRRLHTVAWWRKADHSTIAVFIAATYTPLCLIVLELGTAIWMLSIAWAGAIGSVVMNM
VWINHPRWLSVLVYLALGWLIVPLIPQLWSGAGHTVVWLLLAGGIVYSVGALVYGFKWPGRNARVIGYHEHFHIATIIAA
IVHLVAVWMVVVN

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Escherichia coli, GI1789266, Length=169, Percent_Identity=29.585798816568, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 28291; Mature: 28159

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCC
>Mature Secondary Structure 
SEDREYMDADPLIEDDVSGAEVKDSSDEPLLALTRYVFDRGERPVTRGLFHQVAAILSI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VSGSVLSTYAWMELVWWQALGVMVYALAMLGLFAVSAAYHRGPWRRLHTVAWWRKADHST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCE
IAVFIAATYTPLCLIVLELGTAIWMLSIAWAGAIGSVVMNMVWINHPRWLSVLVYLALGW
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LIVPLIPQLWSGAGHTVVWLLLAGGIVYSVGALVYGFKWPGRNARVIGYHEHFHIATIIA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHH
AIVHLVAVWMVVVN
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]