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The map label for this gene is purF [H]

Identifier: 145296579

GI number: 145296579

Start: 2745068

End: 2746552

Strand: Reverse

Name: purF [H]

Synonym: cgR_2487

Alternate gene names: 145296579

Gene position: 2746552-2745068 (Counterclockwise)

Preceding gene: 145296580

Following gene: 145296578

Centisome position: 82.87

GC content: 57.85

Gene sequence:

>1485_bases
ATGACCCAGGTAAACCACCCGTACGATGATCTCAACGAACAAGCACCGCAGGAAGAATGCGGCGTTTTCGGCGTTTGGGC
GCCAGGTGAGGAAGTCTCGAAACTTACCTACTTTGGCCTCTTCGCACTTCAGCACCGTGGTCAAGAAGCCGCGGGCATCG
CAGTAGGCGATGGCGAACAGATCCTGGTTTTCAAAGATTTGGGCCTAGTCTCCCAAGTTTTCGACGAACCAATTCTGGAA
TCCCTCCGCGGAAACATCGCCATCGGACACACCCGATACACCACCGCCGGCGGAAACACCTGGGAAAATGCCCAGCCGAT
GTTCCGCATGGCACCAGATGGCACCGATATCGCCCTTGGACACAACGGCAACCTGATTAACTACATCGAGTTGCTGGACA
AAGCCACCGAACTTGGCCTCGTCGATCCAGCCGAGAAGCCATCAGATACCGATGTGCTCACCGGACTGCTCGCAAGTGGC
GTCCATGACGGAAAGAGTCTCTTCGATTCCGCCAAGGAACTCCTCCCCAGCGTCAAGGGAGCCTACTGCCTCACCTTCAC
CGACGGACATACCCTGTACGCAGCGCGTGATCCATTCGGCATCCGCCCACTGTCCATCGGTCGCCTCGAGCGTGGCTGGG
TTGTCGCATCTGAAACCGCCGCGCTCGACATCGTAGGTGCCTCGCATGTGCGCGAGGTCGAACCAGGCGAACTTATTGCT
ATCGACGAATCCGGCCTCAAGTCCGCCCGATTCGCCGAGACAACCCGCAAAGGTTGCGTCTTCGAATACGTTTACCTGGC
TCGTCCAGACTCCGTGATCAAGGGAAGAAACGTCAACGAAGCCCGACTTGAAATCGGCCGCAAGCTTGCTGCAGAAGCAC
CAGCAGTCGGCGACCTAGTCATCCCAACCCCAGAATCAGGCACCCCAGCAGCAGTTGGATTCGCCCAAGCATCAGGCATC
CCATTCGGCCAAGGCATGGTCAAAAACGCCTACGTCGGTCGAACCTTCATCCAGCCTTCCGACACTCTCCGCCAACTGGG
AATCCGCCTCAAGCTGAACCCACTGCGCGAAGTCATCGCAGGAAAGCGCCTTGTGGTCGTGGATGATTCCATCGTCCGCG
GCAACACCCAACGCGCCGTGATCCGCATGTTGCGCGAAGCCGGTGCAGCTGAGGTTCACGTACGCATCGCCTCACCACCC
GTGAAATGGCCATGCTTCTACGGCATCGATTTTGCCACCCCAGGCGAGCTCATTGCCAACGCTGTCACCAGTGACAACGA
AGCAGAAATGGTAGAAGCAGTCCGCTCCGCAATCGGCGCAGACACCCTCGGCTACGTCTCCATCGACTCCATGATTGCGG
CAACCGAGCAACCAGCCAACGAACTCTGCATTGCCTGCTTCGACGGCAAATACCCCATGGGTCTGCCACAGGGAAACAGC
AACGCAGACCTAGTCCGCAAGATGCAAGCAACCGCCTCAAGTTAA

Upstream 100 bases:

>100_bases
TTAGTTTCTGGGCAACCGACAGACTACGATTTGACCTGTGGCATTACTTGATCAGCACACGCTCCCTGGTTCAATGGTAA
ATACCGAGCATTCCACTGGA

Downstream 100 bases:

>100_bases
GATCGGTAGGCGATAGGGGTTGAGCATTTTTGCTCTCCCCGTATGCGTGGGGGTTGTCCCGCGCACTTTTAGATAGTTAT
GTTCCTAATAAGTTCCAAAC

Product: amidophosphoribosyltransferase

Products: NA

Alternate protein names: ATase; Glutamine phosphoribosylpyrophosphate amidotransferase; GPATase [H]

Number of amino acids: Translated: 494; Mature: 493

Protein sequence:

>494_residues
MTQVNHPYDDLNEQAPQEECGVFGVWAPGEEVSKLTYFGLFALQHRGQEAAGIAVGDGEQILVFKDLGLVSQVFDEPILE
SLRGNIAIGHTRYTTAGGNTWENAQPMFRMAPDGTDIALGHNGNLINYIELLDKATELGLVDPAEKPSDTDVLTGLLASG
VHDGKSLFDSAKELLPSVKGAYCLTFTDGHTLYAARDPFGIRPLSIGRLERGWVVASETAALDIVGASHVREVEPGELIA
IDESGLKSARFAETTRKGCVFEYVYLARPDSVIKGRNVNEARLEIGRKLAAEAPAVGDLVIPTPESGTPAAVGFAQASGI
PFGQGMVKNAYVGRTFIQPSDTLRQLGIRLKLNPLREVIAGKRLVVVDDSIVRGNTQRAVIRMLREAGAAEVHVRIASPP
VKWPCFYGIDFATPGELIANAVTSDNEAEMVEAVRSAIGADTLGYVSIDSMIAATEQPANELCIACFDGKYPMGLPQGNS
NADLVRKMQATASS

Sequences:

>Translated_494_residues
MTQVNHPYDDLNEQAPQEECGVFGVWAPGEEVSKLTYFGLFALQHRGQEAAGIAVGDGEQILVFKDLGLVSQVFDEPILE
SLRGNIAIGHTRYTTAGGNTWENAQPMFRMAPDGTDIALGHNGNLINYIELLDKATELGLVDPAEKPSDTDVLTGLLASG
VHDGKSLFDSAKELLPSVKGAYCLTFTDGHTLYAARDPFGIRPLSIGRLERGWVVASETAALDIVGASHVREVEPGELIA
IDESGLKSARFAETTRKGCVFEYVYLARPDSVIKGRNVNEARLEIGRKLAAEAPAVGDLVIPTPESGTPAAVGFAQASGI
PFGQGMVKNAYVGRTFIQPSDTLRQLGIRLKLNPLREVIAGKRLVVVDDSIVRGNTQRAVIRMLREAGAAEVHVRIASPP
VKWPCFYGIDFATPGELIANAVTSDNEAEMVEAVRSAIGADTLGYVSIDSMIAATEQPANELCIACFDGKYPMGLPQGNS
NADLVRKMQATASS
>Mature_493_residues
TQVNHPYDDLNEQAPQEECGVFGVWAPGEEVSKLTYFGLFALQHRGQEAAGIAVGDGEQILVFKDLGLVSQVFDEPILES
LRGNIAIGHTRYTTAGGNTWENAQPMFRMAPDGTDIALGHNGNLINYIELLDKATELGLVDPAEKPSDTDVLTGLLASGV
HDGKSLFDSAKELLPSVKGAYCLTFTDGHTLYAARDPFGIRPLSIGRLERGWVVASETAALDIVGASHVREVEPGELIAI
DESGLKSARFAETTRKGCVFEYVYLARPDSVIKGRNVNEARLEIGRKLAAEAPAVGDLVIPTPESGTPAAVGFAQASGIP
FGQGMVKNAYVGRTFIQPSDTLRQLGIRLKLNPLREVIAGKRLVVVDDSIVRGNTQRAVIRMLREAGAAEVHVRIASPPV
KWPCFYGIDFATPGELIANAVTSDNEAEMVEAVRSAIGADTLGYVSIDSMIAATEQPANELCIACFDGKYPMGLPQGNSN
ADLVRKMQATASS

Specific function: De novo purine biosynthesis; first step. [C]

COG id: COG0034

COG function: function code F; Glutamine phosphoribosylpyrophosphate amidotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]

Homologues:

Organism=Homo sapiens, GI29570798, Length=524, Percent_Identity=39.5038167938931, Blast_Score=343, Evalue=1e-94,
Organism=Escherichia coli, GI1788651, Length=476, Percent_Identity=38.8655462184874, Blast_Score=280, Evalue=2e-76,
Organism=Escherichia coli, GI1790167, Length=192, Percent_Identity=30.2083333333333, Blast_Score=66, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17554892, Length=488, Percent_Identity=37.0901639344262, Blast_Score=293, Evalue=2e-79,
Organism=Saccharomyces cerevisiae, GI6323958, Length=486, Percent_Identity=32.7160493827161, Blast_Score=240, Evalue=4e-64,
Organism=Drosophila melanogaster, GI24659598, Length=497, Percent_Identity=40.4426559356137, Blast_Score=363, Evalue=1e-100,
Organism=Drosophila melanogaster, GI28573187, Length=500, Percent_Identity=40.8, Blast_Score=355, Evalue=3e-98,
Organism=Drosophila melanogaster, GI24659604, Length=476, Percent_Identity=40.7563025210084, Blast_Score=352, Evalue=5e-97,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005854
- InterPro:   IPR000583
- InterPro:   IPR017932
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00310 GATase_2; PF00156 Pribosyltran [H]

EC number: =2.4.2.14 [H]

Molecular weight: Translated: 52879; Mature: 52747

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS00103 PUR_PYR_PR_TRANSFER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQVNHPYDDLNEQAPQEECGVFGVWAPGEEVSKLTYFGLFALQHRGQEAAGIAVGDGEQ
CCCCCCCHHHHHHCCCHHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCE
ILVFKDLGLVSQVFDEPILESLRGNIAIGHTRYTTAGGNTWENAQPMFRMAPDGTDIALG
EEEEECCHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCCCCCCCEEECCCCCEEEEC
HNGNLINYIELLDKATELGLVDPAEKPSDTDVLTGLLASGVHDGKSLFDSAKELLPSVKG
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
AYCLTFTDGHTLYAARDPFGIRPLSIGRLERGWVVASETAALDIVGASHVREVEPGELIA
CEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEECHHHHCCCCCCCEEE
IDESGLKSARFAETTRKGCVFEYVYLARPDSVIKGRNVNEARLEIGRKLAAEAPAVGDLV
ECCCCCCHHHHHHHHHCCCEEEEEEEECCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCEE
IPTPESGTPAAVGFAQASGIPFGQGMVKNAYVGRTFIQPSDTLRQLGIRLKLNPLREVIA
ECCCCCCCCCEEEEHHHCCCCCCCCHHHCCCCCCEEECCHHHHHHCCCEEEECHHHHHHC
GKRLVVVDDSIVRGNTQRAVIRMLREAGAAEVHVRIASPPVKWPCFYGIDFATPGELIAN
CCEEEEECCHHHCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEECCCCCCCHHHHHH
AVTSDNEAEMVEAVRSAIGADTLGYVSIDSMIAATEQPANELCIACFDGKYPMGLPQGNS
HHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC
NADLVRKMQATASS
CHHHHHHHHHHCCC
>Mature Secondary Structure 
TQVNHPYDDLNEQAPQEECGVFGVWAPGEEVSKLTYFGLFALQHRGQEAAGIAVGDGEQ
CCCCCCHHHHHHCCCHHHCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCE
ILVFKDLGLVSQVFDEPILESLRGNIAIGHTRYTTAGGNTWENAQPMFRMAPDGTDIALG
EEEEECCHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCCCCCCCEEECCCCCEEEEC
HNGNLINYIELLDKATELGLVDPAEKPSDTDVLTGLLASGVHDGKSLFDSAKELLPSVKG
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
AYCLTFTDGHTLYAARDPFGIRPLSIGRLERGWVVASETAALDIVGASHVREVEPGELIA
CEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEECHHHHCCCCCCCEEE
IDESGLKSARFAETTRKGCVFEYVYLARPDSVIKGRNVNEARLEIGRKLAAEAPAVGDLV
ECCCCCCHHHHHHHHHCCCEEEEEEEECCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCEE
IPTPESGTPAAVGFAQASGIPFGQGMVKNAYVGRTFIQPSDTLRQLGIRLKLNPLREVIA
ECCCCCCCCCEEEEHHHCCCCCCCCHHHCCCCCCEEECCHHHHHHCCCEEEECHHHHHHC
GKRLVVVDDSIVRGNTQRAVIRMLREAGAAEVHVRIASPPVKWPCFYGIDFATPGELIAN
CCEEEEECCHHHCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEECCCCCCCHHHHHH
AVTSDNEAEMVEAVRSAIGADTLGYVSIDSMIAATEQPANELCIACFDGKYPMGLPQGNS
HHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC
NADLVRKMQATASS
CHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]