| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is phoU1 [H]
Identifier: 145296566
GI number: 145296566
Start: 2731706
End: 2732362
Strand: Direct
Name: phoU1 [H]
Synonym: cgR_2474
Alternate gene names: 145296566
Gene position: 2731706-2732362 (Clockwise)
Preceding gene: 145296565
Following gene: 145296572
Centisome position: 82.42
GC content: 56.01
Gene sequence:
>657_bases ATGGATAAGGCGACTGATGCCCTCCTGCGCACTTCTTTGGCATCGGCAGAAAGCGCTTTAGGCAATGCAGAAAAGCTTGA AGAGCTTCGTACTGGATGCGAGTCTCAAGCCGTCGAACTTTTGGCGCTTGAAACTCCTGTAGCCCGTGATCTTCGCCAGG TTGTCTCCTCCATCTACATCGTGGAAGAAATTACCCGCATGGGTGCTCTGGCAATGCACGTGGCTAATTCCGTGCGCCGC CGTTACCCCGATCCGGTGATCCCGGAGGACATGCGTGGCTATTTCAAGGAGATCGCCCGCCTCGCAGCTGACATGACAGA TCATATTCGTCAGATCCTCATTGATCCTGAACCAGATCTTGCCCTAGAGATGGCTAAAAGCGATGACGCGGTGGATGATC TGCATCAGCACATCATGCGTATTCTCACGCTGCGTCCTTGGCCTCACGACACCAAGAGCGCGGTTGATCTGACGCTGCTT TCCCGCTTCTACGAGCGTTACGCCGATCATACGGTAAACGTGGCCGCCCGTATCATTTACCTGTCCACCGGGCTGCACCC GGAGGAGTACATGGAAAAGCGCGAGCAACAAAGGGCCGATGCCGACATGGAGAAGCGCTGGGCCGAGCTGGAGCGGCAGT TCCGCACCAGCGAGTAA
Upstream 100 bases:
>100_bases ATTATCGCCTTATAGTGTTGCCATGCGTACTGCATATAGACAGCAATTGGATGAATTCGCACACGATCTAATCATTTTGT GTGATCTAACTAAGGAGTGC
Downstream 100 bases:
>100_bases AAAGCTGCTTCTCGACGCTAAAAGCCACTACCCACCATCTGAAATTAATCAGGTGGTGGGTAGTGGCTTTAATTCTTCGA TTTATCCGAAGCGGCCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MDKATDALLRTSLASAESALGNAEKLEELRTGCESQAVELLALETPVARDLRQVVSSIYIVEEITRMGALAMHVANSVRR RYPDPVIPEDMRGYFKEIARLAADMTDHIRQILIDPEPDLALEMAKSDDAVDDLHQHIMRILTLRPWPHDTKSAVDLTLL SRFYERYADHTVNVAARIIYLSTGLHPEEYMEKREQQRADADMEKRWAELERQFRTSE
Sequences:
>Translated_218_residues MDKATDALLRTSLASAESALGNAEKLEELRTGCESQAVELLALETPVARDLRQVVSSIYIVEEITRMGALAMHVANSVRR RYPDPVIPEDMRGYFKEIARLAADMTDHIRQILIDPEPDLALEMAKSDDAVDDLHQHIMRILTLRPWPHDTKSAVDLTLL SRFYERYADHTVNVAARIIYLSTGLHPEEYMEKREQQRADADMEKRWAELERQFRTSE >Mature_218_residues MDKATDALLRTSLASAESALGNAEKLEELRTGCESQAVELLALETPVARDLRQVVSSIYIVEEITRMGALAMHVANSVRR RYPDPVIPEDMRGYFKEIARLAADMTDHIRQILIDPEPDLALEMAKSDDAVDDLHQHIMRILTLRPWPHDTKSAVDLTLL SRFYERYADHTVNVAARIIYLSTGLHPEEYMEKREQQRADADMEKRWAELERQFRTSE
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 25005; Mature: 25005
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKATDALLRTSLASAESALGNAEKLEELRTGCESQAVELLALETPVARDLRQVVSSIYI CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHH VEEITRMGALAMHVANSVRRRYPDPVIPEDMRGYFKEIARLAADMTDHIRQILIDPEPDL HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH ALEMAKSDDAVDDLHQHIMRILTLRPWPHDTKSAVDLTLLSRFYERYADHTVNVAARIIY HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSTGLHPEEYMEKREQQRADADMEKRWAELERQFRTSE HHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDKATDALLRTSLASAESALGNAEKLEELRTGCESQAVELLALETPVARDLRQVVSSIYI CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHHH VEEITRMGALAMHVANSVRRRYPDPVIPEDMRGYFKEIARLAADMTDHIRQILIDPEPDL HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH ALEMAKSDDAVDDLHQHIMRILTLRPWPHDTKSAVDLTLLSRFYERYADHTVNVAARIIY HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSTGLHPEEYMEKREQQRADADMEKRWAELERQFRTSE HHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]