| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is 145296469
Identifier: 145296469
GI number: 145296469
Start: 2616642
End: 2617835
Strand: Reverse
Name: 145296469
Synonym: cgR_2381
Alternate gene names: NA
Gene position: 2617835-2616642 (Counterclockwise)
Preceding gene: 145296473
Following gene: 145296463
Centisome position: 78.99
GC content: 53.52
Gene sequence:
>1194_bases ATGGGACTGTGGATCGATGCAACCGCTGGCGTTGCAGGAGATATGTTGCTGGGAGCACTCATTGATGCAGGTGCAGAACT AGAAAAAATCCAACAGGTTGTTGAAGCCGTTATCCCTGGTGACGTGCTTTTGAGAGCAGAAGAGGTAGTGCGCCAAGGCC AACGAGGCATCAAGCTACATGTAGAAGCACAACATGAACACCACCATCACCGCCATTTGAGCACCATTAAAGAACTGCTT GTCAATGCTGACATCCCTGAACAAACCAAGCAGGATGCCTTAGGCGTTTTTGAACTCATCGCTATCGCTGAAGGAAAAGT CCACGGCATCGATCCGGAGAAAATCCACTTCCATGAGGTAGGAGCTTGGGATTCCATCGCAGACATTGTGGGTGTGTGCG AAGCGATCAGGCAGCTTAACCCAGGTTTGATTGCTGCATCTCCGATTGCTTTAGGATTCGGACGCATCAAGGCAGCTCAC GGAGACATTCCAGTGCCAGTTCCAGCAGTGGCAGAGCTGGTGAAAGGCTGGCCCACCCAAACCGGAGCTCTTATGGAGAG CACCGAACCTGTTGGTGAATTAGCCACCCCAACTGGTGTTGCGTTGATCCGTCACTTTGCCACCCAAGATGGCCCTTTCC CAGGTGGCATCATCAATGAAGTCGGTATCGGCGCAGGAACTAAGGACACCGCAGGGCGTCCGAATGTGGTGCGCGCGGTC CTGTTCAGCACCTCCGGTAAGGCTGCCTCAAACCCAGACACCCGTACCCTCGTGCAATTGGAAGCCAACGTTGATGATCA AGACCCACGGCTGTGGACCGGAGTAATCGAGAGCCTCCTAGTCGCTGGCGCAGTAGATGCATGGCTGACCCCAATTTTGA TGAAGAAGGGCCGCCCAGCCCATACAGTGTCAGCACTGGTAGATAGTTCCGCTGTAGAAGCGGTCAAGACCGCACTGTTT GCATCCACCACCACGTTTGGAATCAGGTCATGGGAAGTCGAACGAGAAGGCTTGGATCGTCGTTTCGAACAAGTCGAGGT GGACGGACACACCATCAACATCAAGATTGGCTCCCGAAATGGCCACGACATCAGTGCACAGCCCGAGTTTGAAGATATTC GGTCTGCAGCGGTGGCCTTGGGAATTTCAGAGAGGGAAGTTGTGGCAAGAATTCCGCAAGGCACCACCGAGTAA
Upstream 100 bases:
>100_bases TGCCTTGAGTCTAATTCTTCCGCCCCTGCGATGGGTTTAAGCTGGACTGATAAACGTTTTGTGAACCGAATTTTTTAACT GATTTGAAGAAGCGAGAATA
Downstream 100 bases:
>100_bases CAACCAAAAGGTCGACTGCTTCTAATTTGTGGTTACGCCGGACTGGGCAGACGATTTCTCCACAATCAAGGCTGAGGGAC CTGTGCTTTTGGTATAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MGLWIDATAGVAGDMLLGALIDAGAELEKIQQVVEAVIPGDVLLRAEEVVRQGQRGIKLHVEAQHEHHHHRHLSTIKELL VNADIPEQTKQDALGVFELIAIAEGKVHGIDPEKIHFHEVGAWDSIADIVGVCEAIRQLNPGLIAASPIALGFGRIKAAH GDIPVPVPAVAELVKGWPTQTGALMESTEPVGELATPTGVALIRHFATQDGPFPGGIINEVGIGAGTKDTAGRPNVVRAV LFSTSGKAASNPDTRTLVQLEANVDDQDPRLWTGVIESLLVAGAVDAWLTPILMKKGRPAHTVSALVDSSAVEAVKTALF ASTTTFGIRSWEVEREGLDRRFEQVEVDGHTINIKIGSRNGHDISAQPEFEDIRSAAVALGISEREVVARIPQGTTE
Sequences:
>Translated_397_residues MGLWIDATAGVAGDMLLGALIDAGAELEKIQQVVEAVIPGDVLLRAEEVVRQGQRGIKLHVEAQHEHHHHRHLSTIKELL VNADIPEQTKQDALGVFELIAIAEGKVHGIDPEKIHFHEVGAWDSIADIVGVCEAIRQLNPGLIAASPIALGFGRIKAAH GDIPVPVPAVAELVKGWPTQTGALMESTEPVGELATPTGVALIRHFATQDGPFPGGIINEVGIGAGTKDTAGRPNVVRAV LFSTSGKAASNPDTRTLVQLEANVDDQDPRLWTGVIESLLVAGAVDAWLTPILMKKGRPAHTVSALVDSSAVEAVKTALF ASTTTFGIRSWEVEREGLDRRFEQVEVDGHTINIKIGSRNGHDISAQPEFEDIRSAAVALGISEREVVARIPQGTTE >Mature_396_residues GLWIDATAGVAGDMLLGALIDAGAELEKIQQVVEAVIPGDVLLRAEEVVRQGQRGIKLHVEAQHEHHHHRHLSTIKELLV NADIPEQTKQDALGVFELIAIAEGKVHGIDPEKIHFHEVGAWDSIADIVGVCEAIRQLNPGLIAASPIALGFGRIKAAHG DIPVPVPAVAELVKGWPTQTGALMESTEPVGELATPTGVALIRHFATQDGPFPGGIINEVGIGAGTKDTAGRPNVVRAVL FSTSGKAASNPDTRTLVQLEANVDDQDPRLWTGVIESLLVAGAVDAWLTPILMKKGRPAHTVSALVDSSAVEAVKTALFA STTTFGIRSWEVEREGLDRRFEQVEVDGHTINIKIGSRNGHDISAQPEFEDIRSAAVALGISEREVVARIPQGTTE
Specific function: Unknown
COG id: COG1641
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0272 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2381_CORGB (A4QGM2)
Other databases:
- EMBL: AP009044 - RefSeq: YP_001139290.1 - ProteinModelPortal: A4QGM2 - SMR: A4QGM2 - STRING: A4QGM2 - GeneID: 4993173 - GenomeReviews: AP009044_GR - KEGG: cgt:cgR_2381 - eggNOG: COG1641 - HOGENOM: HBG733311 - OMA: IVGTCLG - ProtClustDB: PRK04194 - HAMAP: MF_01074 - InterPro: IPR002822 - TIGRFAMs: TIGR00299
Pfam domain/function: PF01969 DUF111
EC number: NA
Molecular weight: Translated: 42232; Mature: 42101
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLWIDATAGVAGDMLLGALIDAGAELEKIQQVVEAVIPGDVLLRAEEVVRQGQRGIKLH CCEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEE VEAQHEHHHHRHLSTIKELLVNADIPEQTKQDALGVFELIAIAEGKVHGIDPEKIHFHEV EEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEC GAWDSIADIVGVCEAIRQLNPGLIAASPIALGFGRIKAAHGDIPVPVPAVAELVKGWPTQ CCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCC TGALMESTEPVGELATPTGVALIRHFATQDGPFPGGIINEVGIGAGTKDTAGRPNVVRAV CCCHHHCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCHHEEEE LFSTSGKAASNPDTRTLVQLEANVDDQDPRLWTGVIESLLVAGAVDAWLTPILMKKGRPA EEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH HTVSALVDSSAVEAVKTALFASTTTFGIRSWEVEREGLDRRFEQVEVDGHTINIKIGSRN HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHEEECCEEEEEEECCCC GHDISAQPEFEDIRSAAVALGISEREVVARIPQGTTE CCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCC >Mature Secondary Structure GLWIDATAGVAGDMLLGALIDAGAELEKIQQVVEAVIPGDVLLRAEEVVRQGQRGIKLH CEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEE VEAQHEHHHHRHLSTIKELLVNADIPEQTKQDALGVFELIAIAEGKVHGIDPEKIHFHEV EEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEC GAWDSIADIVGVCEAIRQLNPGLIAASPIALGFGRIKAAHGDIPVPVPAVAELVKGWPTQ CCHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCC TGALMESTEPVGELATPTGVALIRHFATQDGPFPGGIINEVGIGAGTKDTAGRPNVVRAV CCCHHHCCCCCHHHCCCHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCHHEEEE LFSTSGKAASNPDTRTLVQLEANVDDQDPRLWTGVIESLLVAGAVDAWLTPILMKKGRPA EEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH HTVSALVDSSAVEAVKTALFASTTTFGIRSWEVEREGLDRRFEQVEVDGHTINIKIGSRN HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHEEECCEEEEEEECCCC GHDISAQPEFEDIRSAAVALGISEREVVARIPQGTTE CCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA