| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145296465
Identifier: 145296465
GI number: 145296465
Start: 2613389
End: 2614717
Strand: Direct
Name: 145296465
Synonym: cgR_2378
Alternate gene names: NA
Gene position: 2613389-2614717 (Clockwise)
Preceding gene: 145296464
Following gene: 145296466
Centisome position: 78.85
GC content: 56.43
Gene sequence:
>1329_bases ATGAGCCAAAAGACTATTACCCTCCCGATCCCTGAAGGCCTTGCAGAATCCGCAGCATTGCTGGGCGGCCCCACTGAAGT ACTAAATGATGAGCAAGCCCGTCAATTTATCCTCGACGAAGTATCCAAGCTGGATATCGACGGCAAGACCGTATGCATGC CTATCCCCGACGGCACCCGATCCGGCCCCCACGGACTTATGATCCAGGCGGCATACGACGCGATTGCTGACCGCGCGAAG TCCATCACCATTCTCATTGCACTGGGAACGCACGCCGCGATGGATGAACCATCTATCGCAAAGCTCCTGGGTGTTCCTTC CGGAACCATCGAAGCGCGCTTCCCCAAAGCAACCGTGCTCAACCATGATTGGCACAACCCAGAGGCCATTGTTTCCCTCG GCACCATCGAAGCTGCTGAGATCTCCCGTCTCACCAGTGGTCTGCTCCAGGACCGCGACATGGATGTGCAGATCAACAAG CTCGTTGCAGAAGCCGACGTCAACCTCGTTGTTGGCCCTATCTTCCCTCACGAAGTGGTGGGATTCTCTGGTGGCAACAA GTACTTCTTCCCTGGCTGCTCCGTGCACGACGTGATCGATATTTCGCACTGGGTTGGTGCGCTTATCACTGCGTCAGAGA TTATCGGCACCTTAGGAATCACCCCGGTTCGCCAGCTGATCAACTCCTCCTCCGCACTGATCCCAGGCGAAAAACTCGCA GTAACTTATGTTTCCACCACCGGCGACGACGACCAGCCAGTGCTGCACTCCGTAGCGGTTGGAACCACCGAATCCGCATG GGCTGCCAACGCCAACGTTGCGTCCGCCACCCACATCAAATGGCTGGACACCCCTTACAAGCGCATCGTCTCCAAGATTC CAGAAATGTACGAAGACCTCTGGACCGGCGCCAAGGGTGTGTACAAAATGGAACCTGTCTGCGCGGATGGCGGCGAAGTG ATCGTGTACGCACCACACATCACCGAAATCTCCGAAATGCACCAAGGCCTGGCAGACATCGGATACCACTGCATCGAATA CTTCACCAAGCAATGGGACAAATTCAAAGACCACCCATGGGGCGAGATCGCACACTCTACGCACGTTCGCGGACTCGGAT CCTTTGACCCAGAAACCGGCGAAGAAAAACTCCGCATCAACGTCACCCTCGCATCCCAGGTATCCCCTGAAGTCTGCGCC GCCTACAACATTGGCTACGCCGACCCAGCTTCCTTCGATTGGGACGCCCTTGATGCAGACCCAGACACCCTTGTTGTCGA GCACGCCGGTGAAATCCTACACCGCCTTGCCAACCAGCGTTCGGTCTAA
Upstream 100 bases:
>100_bases GACAAGCGAAAAAACAGGAGGGTTTAAAGGCCAACTAGCCAGCCCCTGCAACAAACTGCAACTACTTGCCAAGTGATCTG AGTCTGACGACACTTGGCTT
Downstream 100 bases:
>100_bases CCTCACTAACATTCAAGGAAAGCTCTTTTTTCATGACGCTTTTGATCCCCGATAGGGAAGCCCAAAGGTTGGTAGATGAC GTCGCAAAGCATTTGCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MSQKTITLPIPEGLAESAALLGGPTEVLNDEQARQFILDEVSKLDIDGKTVCMPIPDGTRSGPHGLMIQAAYDAIADRAK SITILIALGTHAAMDEPSIAKLLGVPSGTIEARFPKATVLNHDWHNPEAIVSLGTIEAAEISRLTSGLLQDRDMDVQINK LVAEADVNLVVGPIFPHEVVGFSGGNKYFFPGCSVHDVIDISHWVGALITASEIIGTLGITPVRQLINSSSALIPGEKLA VTYVSTTGDDDQPVLHSVAVGTTESAWAANANVASATHIKWLDTPYKRIVSKIPEMYEDLWTGAKGVYKMEPVCADGGEV IVYAPHITEISEMHQGLADIGYHCIEYFTKQWDKFKDHPWGEIAHSTHVRGLGSFDPETGEEKLRINVTLASQVSPEVCA AYNIGYADPASFDWDALDADPDTLVVEHAGEILHRLANQRSV
Sequences:
>Translated_442_residues MSQKTITLPIPEGLAESAALLGGPTEVLNDEQARQFILDEVSKLDIDGKTVCMPIPDGTRSGPHGLMIQAAYDAIADRAK SITILIALGTHAAMDEPSIAKLLGVPSGTIEARFPKATVLNHDWHNPEAIVSLGTIEAAEISRLTSGLLQDRDMDVQINK LVAEADVNLVVGPIFPHEVVGFSGGNKYFFPGCSVHDVIDISHWVGALITASEIIGTLGITPVRQLINSSSALIPGEKLA VTYVSTTGDDDQPVLHSVAVGTTESAWAANANVASATHIKWLDTPYKRIVSKIPEMYEDLWTGAKGVYKMEPVCADGGEV IVYAPHITEISEMHQGLADIGYHCIEYFTKQWDKFKDHPWGEIAHSTHVRGLGSFDPETGEEKLRINVTLASQVSPEVCA AYNIGYADPASFDWDALDADPDTLVVEHAGEILHRLANQRSV >Mature_441_residues SQKTITLPIPEGLAESAALLGGPTEVLNDEQARQFILDEVSKLDIDGKTVCMPIPDGTRSGPHGLMIQAAYDAIADRAKS ITILIALGTHAAMDEPSIAKLLGVPSGTIEARFPKATVLNHDWHNPEAIVSLGTIEAAEISRLTSGLLQDRDMDVQINKL VAEADVNLVVGPIFPHEVVGFSGGNKYFFPGCSVHDVIDISHWVGALITASEIIGTLGITPVRQLINSSSALIPGEKLAV TYVSTTGDDDQPVLHSVAVGTTESAWAANANVASATHIKWLDTPYKRIVSKIPEMYEDLWTGAKGVYKMEPVCADGGEVI VYAPHITEISEMHQGLADIGYHCIEYFTKQWDKFKDHPWGEIAHSTHVRGLGSFDPETGEEKLRINVTLASQVSPEVCAA YNIGYADPASFDWDALDADPDTLVVEHAGEILHRLANQRSV
Specific function: Unknown
COG id: COG3875
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47668; Mature: 47537
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKTITLPIPEGLAESAALLGGPTEVLNDEQARQFILDEVSKLDIDGKTVCMPIPDGTR CCCCEEEEECCCCHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC SGPHGLMIQAAYDAIADRAKSITILIALGTHAAMDEPSIAKLLGVPSGTIEARFPKATVL CCCCCEEEEHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHCCCCCCEEECCCCEEEE NHDWHNPEAIVSLGTIEAAEISRLTSGLLQDRDMDVQINKLVAEADVNLVVGPIFPHEVV CCCCCCCHHEEEECCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCEEECCCCCHHHE GFSGGNKYFFPGCSVHDVIDISHWVGALITASEIIGTLGITPVRQLINSSSALIPGEKLA ECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEE VTYVSTTGDDDQPVLHSVAVGTTESAWAANANVASATHIKWLDTPYKRIVSKIPEMYEDL EEEEECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH WTGAKGVYKMEPVCADGGEVIVYAPHITEISEMHQGLADIGYHCIEYFTKQWDKFKDHPW HCCCCCCEEECCEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GEIAHSTHVRGLGSFDPETGEEKLRINVTLASQVSPEVCAAYNIGYADPASFDWDALDAD HHHHHCHHCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHEEECCCCCCCCCCCCCCCCC PDTLVVEHAGEILHRLANQRSV CCEEEHHHHHHHHHHHHHCCCC >Mature Secondary Structure SQKTITLPIPEGLAESAALLGGPTEVLNDEQARQFILDEVSKLDIDGKTVCMPIPDGTR CCCEEEEECCCCHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCC SGPHGLMIQAAYDAIADRAKSITILIALGTHAAMDEPSIAKLLGVPSGTIEARFPKATVL CCCCCEEEEHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHCCCCCCEEECCCCEEEE NHDWHNPEAIVSLGTIEAAEISRLTSGLLQDRDMDVQINKLVAEADVNLVVGPIFPHEVV CCCCCCCHHEEEECCCCHHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCEEECCCCCHHHE GFSGGNKYFFPGCSVHDVIDISHWVGALITASEIIGTLGITPVRQLINSSSALIPGEKLA ECCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEE VTYVSTTGDDDQPVLHSVAVGTTESAWAANANVASATHIKWLDTPYKRIVSKIPEMYEDL EEEEECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHH WTGAKGVYKMEPVCADGGEVIVYAPHITEISEMHQGLADIGYHCIEYFTKQWDKFKDHPW HCCCCCCEEECCEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GEIAHSTHVRGLGSFDPETGEEKLRINVTLASQVSPEVCAAYNIGYADPASFDWDALDAD HHHHHCHHCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHEEECCCCCCCCCCCCCCCCC PDTLVVEHAGEILHRLANQRSV CCEEEHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA