| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is phoB [H]
Identifier: 145296447
GI number: 145296447
Start: 2596521
End: 2597942
Strand: Direct
Name: phoB [H]
Synonym: cgR_2360
Alternate gene names: 145296447
Gene position: 2596521-2597942 (Clockwise)
Preceding gene: 145296441
Following gene: 145296449
Centisome position: 78.35
GC content: 55.77
Gene sequence:
>1422_bases ATGTCTTTCAAGCGTCGTTCGCTTGCAATCACTTGCGCCATCACCTCCAGCATTGTTCTCGCTGGAATCTCCGGCACCGC TGCCGCCCAGTCCTCCTACGTTTCTGGATCTTCAGGACTACTGTCCTCCAGCGAGCTCGATCCTGAAACTCCAGCACCTC TGGATGCTCCAAAGAACATCATCTACATGATCGGTGACGGCATGGGTTACAACCATGTTTCCGCAACCAACCTGTTTGAA ACCGGCCAGACCATGTACCAGGTCGAAGGCGAGCCAGGTTCCGTCACCCCAGTTGAGGGTGGCACTCCAGTTCAGGCATT TGAAGGCACTGAGTGGACCCAGCTTGCACAGTCCACCTTCCAGGACGGAAACTCCTACGACCCTGAGCGCGCGTGGGCTG ATCACAACTATGTCAATGAGAACTTCACCGACTCCGCTGCTGCAGGAACCGCAATGGCAACTGGTGTGAAGACCACCAAC GGCATGATTGGCGTTAACCCAGCTAACGAGCCTGCGAAGAACACCTCTGAGTACGCAATTGAAAAGGGCAAGGCAGCTGG CGTTGTTTCCTCTGTTCCTTTCAACCACGCAACTCCTGCGGCTTGGGCAGCTCACAACTCCAACCGCAATGATCTGCACG CGATGGCCGAAGAGATGATCAACAGTGATCTCAACGTCATCATGGGTGCTGGCCACCCGTTCTTCGACAACAACGGCAAC CCAATCACAGAAGCCGACGAAGACTACATGCAGGCTTCCCAGTACGAGCGCCTCGCAAGTGGCGAAACCGACTTCACCTT CGTCGAAGAGGACGCAGACTTCGAGGCTCTCGCAAACGGCCAAGTTGAAAGTGACAAGTACTTCGGTCTCGCGCAGGTCG AAGACACCCTCCAGCACAACCGCGACGGCGACTCCGTCACTCCTTACGACGTTCCGCTCAACGACGTCGTCGACCTTTCC ACCATGTCCAAGGCAGCCCTCAACGTTCTTAACCAGGACGAAGACGGCTTCCACATCATGATCGAAGGTGGCGCAATCGA CTGGGCAGGCCACGCAAACGACATGGCTCGCGACATCGAAGAAGTCCAAGAGTTCAACAAGGCCGTTGAAACTGTCATCG AGTGGGTTGAGACCAACTCCTCTTGGGATGAAACCCTCGTGATCGTCACCGCCGACCACGAAACCGGCTACATGACCGGT CCTAACGATGATCCAAACTGGTCCGCAATGACCGGCGCTGCAGGCATCGTTCCAAACCACGGCTGGCACTCCGGCAACCA CACCAACCAGCTCGTCCCAGTGTTCGTTCGTGGCGCAGGTGTCTCCGATATCGTTGCTGCTGCCGATCAAGTTGACCCAA TTCGCGGCAACTACATCGACAACATTGAGATCGCGAACCTGACTTTCAACAAGTGGTGGTAA
Upstream 100 bases:
>100_bases AACTCTTTGGTTGTCATACCTTTCTTGCTTCATATTCATGAAAAACACATTCCCAGTGAAGCCCTGAAGCACACTCTCGA GCCCAACATAAGGAATAGAA
Downstream 100 bases:
>100_bases CCCCCGCTTGACCAGCCGTTTTGGTTAATGCAGCACGGTGAGTTAAAGTTATCCGTGCTGCTTAACGCAGTAATGGTGGC TGTAGTTCAGCTGGTAGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Alkaline phosphatase III; APase III [H]
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MSFKRRSLAITCAITSSIVLAGISGTAAAQSSYVSGSSGLLSSSELDPETPAPLDAPKNIIYMIGDGMGYNHVSATNLFE TGQTMYQVEGEPGSVTPVEGGTPVQAFEGTEWTQLAQSTFQDGNSYDPERAWADHNYVNENFTDSAAAGTAMATGVKTTN GMIGVNPANEPAKNTSEYAIEKGKAAGVVSSVPFNHATPAAWAAHNSNRNDLHAMAEEMINSDLNVIMGAGHPFFDNNGN PITEADEDYMQASQYERLASGETDFTFVEEDADFEALANGQVESDKYFGLAQVEDTLQHNRDGDSVTPYDVPLNDVVDLS TMSKAALNVLNQDEDGFHIMIEGGAIDWAGHANDMARDIEEVQEFNKAVETVIEWVETNSSWDETLVIVTADHETGYMTG PNDDPNWSAMTGAAGIVPNHGWHSGNHTNQLVPVFVRGAGVSDIVAAADQVDPIRGNYIDNIEIANLTFNKWW
Sequences:
>Translated_473_residues MSFKRRSLAITCAITSSIVLAGISGTAAAQSSYVSGSSGLLSSSELDPETPAPLDAPKNIIYMIGDGMGYNHVSATNLFE TGQTMYQVEGEPGSVTPVEGGTPVQAFEGTEWTQLAQSTFQDGNSYDPERAWADHNYVNENFTDSAAAGTAMATGVKTTN GMIGVNPANEPAKNTSEYAIEKGKAAGVVSSVPFNHATPAAWAAHNSNRNDLHAMAEEMINSDLNVIMGAGHPFFDNNGN PITEADEDYMQASQYERLASGETDFTFVEEDADFEALANGQVESDKYFGLAQVEDTLQHNRDGDSVTPYDVPLNDVVDLS TMSKAALNVLNQDEDGFHIMIEGGAIDWAGHANDMARDIEEVQEFNKAVETVIEWVETNSSWDETLVIVTADHETGYMTG PNDDPNWSAMTGAAGIVPNHGWHSGNHTNQLVPVFVRGAGVSDIVAAADQVDPIRGNYIDNIEIANLTFNKWW >Mature_472_residues SFKRRSLAITCAITSSIVLAGISGTAAAQSSYVSGSSGLLSSSELDPETPAPLDAPKNIIYMIGDGMGYNHVSATNLFET GQTMYQVEGEPGSVTPVEGGTPVQAFEGTEWTQLAQSTFQDGNSYDPERAWADHNYVNENFTDSAAAGTAMATGVKTTNG MIGVNPANEPAKNTSEYAIEKGKAAGVVSSVPFNHATPAAWAAHNSNRNDLHAMAEEMINSDLNVIMGAGHPFFDNNGNP ITEADEDYMQASQYERLASGETDFTFVEEDADFEALANGQVESDKYFGLAQVEDTLQHNRDGDSVTPYDVPLNDVVDLST MSKAALNVLNQDEDGFHIMIEGGAIDWAGHANDMARDIEEVQEFNKAVETVIEWVETNSSWDETLVIVTADHETGYMTGP NDDPNWSAMTGAAGIVPNHGWHSGNHTNQLVPVFVRGAGVSDIVAAADQVDPIRGNYIDNIEIANLTFNKWW
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI116734717, Length=379, Percent_Identity=25.5936675461741, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI294660770, Length=374, Percent_Identity=25.1336898395722, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI294660772, Length=298, Percent_Identity=26.1744966442953, Blast_Score=83, Evalue=6e-16, Organism=Escherichia coli, GI48994877, Length=437, Percent_Identity=27.6887871853547, Blast_Score=95, Evalue=8e-21, Organism=Saccharomyces cerevisiae, GI6320689, Length=410, Percent_Identity=26.0975609756098, Blast_Score=93, Evalue=9e-20, Organism=Drosophila melanogaster, GI19921912, Length=391, Percent_Identity=26.8542199488491, Blast_Score=105, Evalue=9e-23, Organism=Drosophila melanogaster, GI21358067, Length=382, Percent_Identity=25.9162303664921, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI21355981, Length=367, Percent_Identity=26.9754768392371, Blast_Score=92, Evalue=6e-19, Organism=Drosophila melanogaster, GI24585213, Length=403, Percent_Identity=26.5508684863524, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI21355151, Length=396, Percent_Identity=25.5050505050505, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI85725200, Length=412, Percent_Identity=25.2427184466019, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI85815833, Length=412, Percent_Identity=25.2427184466019, Blast_Score=83, Evalue=5e-16,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 50837; Mature: 50706
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFKRRSLAITCAITSSIVLAGISGTAAAQSSYVSGSSGLLSSSELDPETPAPLDAPKNI CCCCCCEEEEEEEEECEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE IYMIGDGMGYNHVSATNLFETGQTMYQVEGEPGSVTPVEGGTPVQAFEGTEWTQLAQSTF EEEEECCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEECCCCHHHHHHHHHH QDGNSYDPERAWADHNYVNENFTDSAAAGTAMATGVKTTNGMIGVNPANEPAKNTSEYAI CCCCCCCCHHHHCCCCCCCCCCCCHHHCCCHHHCCCCCCCCEEEECCCCCCCCCCHHHHH EKGKAAGVVSSVPFNHATPAAWAAHNSNRNDLHAMAEEMINSDLNVIMGAGHPFFDNNGN HCCCCCCEEECCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC PITEADEDYMQASQYERLASGETDFTFVEEDADFEALANGQVESDKYFGLAQVEDTLQHN CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCEEHHHHHHHHHHC RDGDSVTPYDVPLNDVVDLSTMSKAALNVLNQDEDGFHIMIEGGAIDWAGHANDMARDIE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCHHHHHHHH EVQEFNKAVETVIEWVETNSSWDETLVIVTADHETGYMTGPNDDPNWSAMTGAAGIVPNH HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC GWHSGNHTNQLVPVFVRGAGVSDIVAAADQVDPIRGNYIDNIEIANLTFNKWW CCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCC >Mature Secondary Structure SFKRRSLAITCAITSSIVLAGISGTAAAQSSYVSGSSGLLSSSELDPETPAPLDAPKNI CCCCCEEEEEEEEECEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCE IYMIGDGMGYNHVSATNLFETGQTMYQVEGEPGSVTPVEGGTPVQAFEGTEWTQLAQSTF EEEEECCCCCCCCCHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEECCCCHHHHHHHHHH QDGNSYDPERAWADHNYVNENFTDSAAAGTAMATGVKTTNGMIGVNPANEPAKNTSEYAI CCCCCCCCHHHHCCCCCCCCCCCCHHHCCCHHHCCCCCCCCEEEECCCCCCCCCCHHHHH EKGKAAGVVSSVPFNHATPAAWAAHNSNRNDLHAMAEEMINSDLNVIMGAGHPFFDNNGN HCCCCCCEEECCCCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC PITEADEDYMQASQYERLASGETDFTFVEEDADFEALANGQVESDKYFGLAQVEDTLQHN CCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCEEHHHHHHHHHHC RDGDSVTPYDVPLNDVVDLSTMSKAALNVLNQDEDGFHIMIEGGAIDWAGHANDMARDIE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEECCCCCHHHHHHHH EVQEFNKAVETVIEWVETNSSWDETLVIVTADHETGYMTGPNDDPNWSAMTGAAGIVPNH HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC GWHSGNHTNQLVPVFVRGAGVSDIVAAADQVDPIRGNYIDNIEIANLTFNKWW CCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1898729; 9202461; 9384377; 2113910; 2105301 [H]