| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yebZ [C]
Identifier: 145296446
GI number: 145296446
Start: 2593719
End: 2595872
Strand: Reverse
Name: yebZ [C]
Synonym: cgR_2359
Alternate gene names: 145296446
Gene position: 2595872-2593719 (Counterclockwise)
Preceding gene: 145296448
Following gene: 145296445
Centisome position: 78.33
GC content: 53.81
Gene sequence:
>2154_bases ATGGATGAGCAGGTCGTTGCCGAGTGTTCTGGTGGAGATTCTTCTCCAGTGAATAAATCGCAGGTTAAGAGCAGTAAGGT GAGAATCACCTGGCCTTTCTACGTTTTGTTTGCGTTTGTGGCTGGTTTGGTGGGTGTCATTTTGGCGTGGGGTTTCCTGT CGGAATCTCTTGCTGCATTGGGCATCCCTGATCCTGGCCCGATGACTACTGCTGGTTTGCCGTTTTTGCGTGCGGTGGGC TGGATTGTTGCTGCGTTGTCGGCGGGTAGTTTCATGGCGACGACCTTCTTTATTAGTCCGCGAGAAATTAAGCGCAGCGC AGAAGATGGGCCTCAGAAGGCTAGTTATCTGAATCGTTCGTATTTGTCGGTGGATGGTTCGATCGCGGCGCGTACGGGTT CGTTTGCGGCTATTTGTTTTGGTCTTGTTGCCATTGTGATGATTCCGATGGTGATGTCGGATTTGTCTGGGCAGCCGTTC ACTGAGGCGTTGAAGTTGCAGAACTGGGCGATCGCATTCGAACAGGTTGCATTGGCTAAGGCGTGGTCGTGGGTTGCTGG TTTTGCCTTTATTACAGGTATTGCTGGTCTGTTTTGTCGTACATGGTTGGCACAGCCGTTGCTGTTTGCGGGTTCCATCA TCATGACTGTTCCACTTGGTTTGGAAGGTCACTCAGCTGCCGGTGGCGACCACGATTACGGCACGAACTCCCTGTTGTGG CACTTGGTTTTGATGCTGCTGTGGGTGGGTGGCCTGATGGCGTTGATCGCGCATGCTCGTCGCATTGGCCCAAATATGGA TATCGCGGTGAAGCGTTATTCCATCGTGGCGACATACGCCGTTATTGGTATGGCAATTTCTGGCATCGTGAATGCGTTGC TGCGCATGGACTTCTCAGATCTATTCACCACCAATTACGGTCTGCTGGTGTTTGCCAAGGCTGTTGGCGTTGTCGTGGTG GGCATGTTTGGTTTGGCCCACCGCACTTTCACCATCCCGAAGCTAGAGAAGGATCCTAAGAACTCTGCACTGTTTACTCG CATCGCGATCGTGGAAGTTCTTGCCATGGCTGCGGTCACCGGCGTTGCTATTTCCATGGGACGCACCCCGCCACCTGCAC CAGAGATTCAAGATCTTTCCGTGATGGCTTTGGAAATGGGCTACTCCCTGGAGAAGGAACCAACTCTTCTCAACGTGTTC ACCATGTGGCGTTTTGATTTGATGCTGGGCACCATCGGCATCATGTTATTGGCCTTCTATATGTGTGGCCTTGTGGCTTT GCGTCGACAAGCAAAAAAGTGGAACCACATGCGCACCTTCTGGTGGGTGCTGGGCTGTATCACCCTGGTGGTCACCGTTT CTTCCGGCATCGGCATGAATATGCCGGCGACGTTCTCCATGCACATGGTCGCGCACATGCTGCTGTCGATGGTCGTGCCG GTGTTCCTGGTGCTGGGCGCGCCGCTGTCGCTGATCATGGAGGCCGTTGCGCCTGGTGAGCCGGGCCGACCTGGCCTGCA TGAATGGGCCGCGGTGATGACTGATAATCCGCTGCTGAAATTCATCATGCACCCAGCGGTGAACACGATTCAGTTCATCA TCATTTTCTACGCGCTCTACCTGACCCCGCTATATGAAATCATGGTGTCTGAGCATGCAGGACACCTGATCATGAACTTC GTGTTCGTGATTTCCGGATACCTCTATTACTGGGAAATGATCGGTCCAGACCCCAAGCCGGAGGAGCGCACGCATGTGTC GCGTCTGGCGTGGCTGACTTTCTCGATGCCATTCCACCTCTTCTTCGGCGTGTACCTCATGCAGCTCCAGGTCATTTTGG CGGAGGATTTCTACACCAAACTCAACCTGCCATGGCACGTCGATCTGGCCTACGACCAGCTCGTTGGCGGCGGCATCGCC TGGGCGTCGGGTTCCTTCCCGCTGATTGTCGTGTTCGGTTACCTCTTCCGTGGTTGGTTCCGTGAGGAAAGAATTGTGGA GAAAAACTACGAGTCTCGCGCCGAAGCCACTGGTTACGCTGACGCTGAGGAATACAACAGGATGCTCGCGCGCATGAACG AGGGCCACGACATGCACGGCGACTACTACCAGGAAACCTTCGAGTCAAAAGATAAAGGCAAAGACAAAGAATAA
Upstream 100 bases:
>100_bases ATTATTGCGTGCGCTTGGAACTTTACCGTACACCCGTGTTCGGCTATCACATGGATCACTCAACTATGGTTCTGGGCGTT GGGGAGGTTAGATTAGGGGC
Downstream 100 bases:
>100_bases GCTTTTCGACGTCTCCCCGCACCCCTTCCAGCCCGCCCCTGTGGATAACTAGGCCTCATTTTCGATCAGGCCACAACTTA TCCACAGGCGGGCTTTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 717; Mature: 717
Protein sequence:
>717_residues MDEQVVAECSGGDSSPVNKSQVKSSKVRITWPFYVLFAFVAGLVGVILAWGFLSESLAALGIPDPGPMTTAGLPFLRAVG WIVAALSAGSFMATTFFISPREIKRSAEDGPQKASYLNRSYLSVDGSIAARTGSFAAICFGLVAIVMIPMVMSDLSGQPF TEALKLQNWAIAFEQVALAKAWSWVAGFAFITGIAGLFCRTWLAQPLLFAGSIIMTVPLGLEGHSAAGGDHDYGTNSLLW HLVLMLLWVGGLMALIAHARRIGPNMDIAVKRYSIVATYAVIGMAISGIVNALLRMDFSDLFTTNYGLLVFAKAVGVVVV GMFGLAHRTFTIPKLEKDPKNSALFTRIAIVEVLAMAAVTGVAISMGRTPPPAPEIQDLSVMALEMGYSLEKEPTLLNVF TMWRFDLMLGTIGIMLLAFYMCGLVALRRQAKKWNHMRTFWWVLGCITLVVTVSSGIGMNMPATFSMHMVAHMLLSMVVP VFLVLGAPLSLIMEAVAPGEPGRPGLHEWAAVMTDNPLLKFIMHPAVNTIQFIIIFYALYLTPLYEIMVSEHAGHLIMNF VFVISGYLYYWEMIGPDPKPEERTHVSRLAWLTFSMPFHLFFGVYLMQLQVILAEDFYTKLNLPWHVDLAYDQLVGGGIA WASGSFPLIVVFGYLFRGWFREERIVEKNYESRAEATGYADAEEYNRMLARMNEGHDMHGDYYQETFESKDKGKDKE
Sequences:
>Translated_717_residues MDEQVVAECSGGDSSPVNKSQVKSSKVRITWPFYVLFAFVAGLVGVILAWGFLSESLAALGIPDPGPMTTAGLPFLRAVG WIVAALSAGSFMATTFFISPREIKRSAEDGPQKASYLNRSYLSVDGSIAARTGSFAAICFGLVAIVMIPMVMSDLSGQPF TEALKLQNWAIAFEQVALAKAWSWVAGFAFITGIAGLFCRTWLAQPLLFAGSIIMTVPLGLEGHSAAGGDHDYGTNSLLW HLVLMLLWVGGLMALIAHARRIGPNMDIAVKRYSIVATYAVIGMAISGIVNALLRMDFSDLFTTNYGLLVFAKAVGVVVV GMFGLAHRTFTIPKLEKDPKNSALFTRIAIVEVLAMAAVTGVAISMGRTPPPAPEIQDLSVMALEMGYSLEKEPTLLNVF TMWRFDLMLGTIGIMLLAFYMCGLVALRRQAKKWNHMRTFWWVLGCITLVVTVSSGIGMNMPATFSMHMVAHMLLSMVVP VFLVLGAPLSLIMEAVAPGEPGRPGLHEWAAVMTDNPLLKFIMHPAVNTIQFIIIFYALYLTPLYEIMVSEHAGHLIMNF VFVISGYLYYWEMIGPDPKPEERTHVSRLAWLTFSMPFHLFFGVYLMQLQVILAEDFYTKLNLPWHVDLAYDQLVGGGIA WASGSFPLIVVFGYLFRGWFREERIVEKNYESRAEATGYADAEEYNRMLARMNEGHDMHGDYYQETFESKDKGKDKE >Mature_717_residues MDEQVVAECSGGDSSPVNKSQVKSSKVRITWPFYVLFAFVAGLVGVILAWGFLSESLAALGIPDPGPMTTAGLPFLRAVG WIVAALSAGSFMATTFFISPREIKRSAEDGPQKASYLNRSYLSVDGSIAARTGSFAAICFGLVAIVMIPMVMSDLSGQPF TEALKLQNWAIAFEQVALAKAWSWVAGFAFITGIAGLFCRTWLAQPLLFAGSIIMTVPLGLEGHSAAGGDHDYGTNSLLW HLVLMLLWVGGLMALIAHARRIGPNMDIAVKRYSIVATYAVIGMAISGIVNALLRMDFSDLFTTNYGLLVFAKAVGVVVV GMFGLAHRTFTIPKLEKDPKNSALFTRIAIVEVLAMAAVTGVAISMGRTPPPAPEIQDLSVMALEMGYSLEKEPTLLNVF TMWRFDLMLGTIGIMLLAFYMCGLVALRRQAKKWNHMRTFWWVLGCITLVVTVSSGIGMNMPATFSMHMVAHMLLSMVVP VFLVLGAPLSLIMEAVAPGEPGRPGLHEWAAVMTDNPLLKFIMHPAVNTIQFIIIFYALYLTPLYEIMVSEHAGHLIMNF VFVISGYLYYWEMIGPDPKPEERTHVSRLAWLTFSMPFHLFFGVYLMQLQVILAEDFYTKLNLPWHVDLAYDQLVGGGIA WASGSFPLIVVFGYLFRGWFREERIVEKNYESRAEATGYADAEEYNRMLARMNEGHDMHGDYYQETFESKDKGKDKE
Specific function: Unknown
COG id: COG3336
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv0102 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008457 - InterPro: IPR019108 [H]
Pfam domain/function: PF09678 Caa3_CtaG; PF05425 CopD [H]
EC number: NA
Molecular weight: Translated: 79174; Mature: 79174
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEQVVAECSGGDSSPVNKSQVKSSKVRITWPFYVLFAFVAGLVGVILAWGFLSESLAAL CCCCEEEECCCCCCCCCCHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GIPDPGPMTTAGLPFLRAVGWIVAALSAGSFMATTFFISPREIKRSAEDGPQKASYLNRS CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHEEEECHHHHHHHHCCCHHHHHHHCHH YLSVDGSIAARTGSFAAICFGLVAIVMIPMVMSDLSGQPFTEALKLQNWAIAFEQVALAK HEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH AWSWVAGFAFITGIAGLFCRTWLAQPLLFAGSIIMTVPLGLEGHSAAGGDHDYGTNSLLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCCCCCCCCCCCCCHHHHH HLVLMLLWVGGLMALIAHARRIGPNMDIAVKRYSIVATYAVIGMAISGIVNALLRMDFSD HHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LFTTNYGLLVFAKAVGVVVVGMFGLAHRTFTIPKLEKDPKNSALFTRIAIVEVLAMAAVT HHHCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH GVAISMGRTPPPAPEIQDLSVMALEMGYSLEKEPTLLNVFTMWRFDLMLGTIGIMLLAFY HHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MCGLVALRRQAKKWNHMRTFWWVLGCITLVVTVSSGIGMNMPATFSMHMVAHMLLSMVVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH VFLVLGAPLSLIMEAVAPGEPGRPGLHEWAAVMTDNPLLKFIMHPAVNTIQFIIIFYALY HHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LTPLYEIMVSEHAGHLIMNFVFVISGYLYYWEMIGPDPKPEERTHVSRLAWLTFSMPFHL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH FFGVYLMQLQVILAEDFYTKLNLPWHVDLAYDQLVGGGIAWASGSFPLIVVFGYLFRGWF HHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHH REERIVEKNYESRAEATGYADAEEYNRMLARMNEGHDMHGDYYQETFESKDKGKDKE HHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDEQVVAECSGGDSSPVNKSQVKSSKVRITWPFYVLFAFVAGLVGVILAWGFLSESLAAL CCCCEEEECCCCCCCCCCHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GIPDPGPMTTAGLPFLRAVGWIVAALSAGSFMATTFFISPREIKRSAEDGPQKASYLNRS CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHEEEECHHHHHHHHCCCHHHHHHHCHH YLSVDGSIAARTGSFAAICFGLVAIVMIPMVMSDLSGQPFTEALKLQNWAIAFEQVALAK HEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH AWSWVAGFAFITGIAGLFCRTWLAQPLLFAGSIIMTVPLGLEGHSAAGGDHDYGTNSLLW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECCCCCCCCCCCCCCCCCCHHHHH HLVLMLLWVGGLMALIAHARRIGPNMDIAVKRYSIVATYAVIGMAISGIVNALLRMDFSD HHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LFTTNYGLLVFAKAVGVVVVGMFGLAHRTFTIPKLEKDPKNSALFTRIAIVEVLAMAAVT HHHCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH GVAISMGRTPPPAPEIQDLSVMALEMGYSLEKEPTLLNVFTMWRFDLMLGTIGIMLLAFY HHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MCGLVALRRQAKKWNHMRTFWWVLGCITLVVTVSSGIGMNMPATFSMHMVAHMLLSMVVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH VFLVLGAPLSLIMEAVAPGEPGRPGLHEWAAVMTDNPLLKFIMHPAVNTIQFIIIFYALY HHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LTPLYEIMVSEHAGHLIMNFVFVISGYLYYWEMIGPDPKPEERTHVSRLAWLTFSMPFHL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH FFGVYLMQLQVILAEDFYTKLNLPWHVDLAYDQLVGGGIAWASGSFPLIVVFGYLFRGWF HHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHH REERIVEKNYESRAEATGYADAEEYNRMLARMNEGHDMHGDYYQETFESKDKGKDKE HHHHHHHHCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476188; 11234002 [H]