| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is 145296440
Identifier: 145296440
GI number: 145296440
Start: 2589665
End: 2590132
Strand: Reverse
Name: 145296440
Synonym: cgR_2354
Alternate gene names: NA
Gene position: 2590132-2589665 (Counterclockwise)
Preceding gene: 145296442
Following gene: 145296439
Centisome position: 78.15
GC content: 54.49
Gene sequence:
>468_bases ATGGCAGCCAACAATGTCAACGATGACACCCAAAATAATCTTCACGTGACGGAGGTGGATCTCCGCTGGGCTGATTTCGA TCGTTTTGGGCACGTCAACAACGCGGCGTTCATTGAGATCGCGCAGGAAGCTCGATTGGCGTTTGCGGAGGATCAGTTCC GTGAGCGTGGCTATGAGATCCCTGCTGTGTTTGTGCGCCACTTGGAAGTTGATTATTTGCGTGCGATCTTGCCGGATACC ACCCAGGCTGTCGTGGAGACACAGGTGACCAAGATCGGTAATACTTCCTTCAGCACTCGTCAAGAGGTCAAGGATCGTAA CGGTCGTGTGTGCTGCGTGGTTGAGTGCGTGCAGGTGGCTGTCAATGTGCAGACTGCTGCGCCTCGTTCCATCAGCAAGG TGGAGCGCAAGGTGCTGACCGCTGTCGCTACTGATGAGGTGCAGTCGCAGGAAGCTCTAGAAAAGTAG
Upstream 100 bases:
>100_bases CGTGGGATCGGTAGAATGCTTGCGAGACGCTTGATTTGCAAGATGTGAGCAATGAGACGGCCAAGCAAACAGCTACAAAG AAAGAGGCTAGGCGAACCCC
Downstream 100 bases:
>100_bases TGGTTGAGACTCTTTCTATCACCTCAGGTGCGGCTGGTCTGCAGGCGCTTGTTGCGCGTGCGGTTGGTTTGGATGAGTTG GCGAGCGCGCGTTTCCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase Superfamily Protein; Acyl-CoA Thioester Hydrolase
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MAANNVNDDTQNNLHVTEVDLRWADFDRFGHVNNAAFIEIAQEARLAFAEDQFRERGYEIPAVFVRHLEVDYLRAILPDT TQAVVETQVTKIGNTSFSTRQEVKDRNGRVCCVVECVQVAVNVQTAAPRSISKVERKVLTAVATDEVQSQEALEK
Sequences:
>Translated_155_residues MAANNVNDDTQNNLHVTEVDLRWADFDRFGHVNNAAFIEIAQEARLAFAEDQFRERGYEIPAVFVRHLEVDYLRAILPDT TQAVVETQVTKIGNTSFSTRQEVKDRNGRVCCVVECVQVAVNVQTAAPRSISKVERKVLTAVATDEVQSQEALEK >Mature_154_residues AANNVNDDTQNNLHVTEVDLRWADFDRFGHVNNAAFIEIAQEARLAFAEDQFRERGYEIPAVFVRHLEVDYLRAILPDTT QAVVETQVTKIGNTSFSTRQEVKDRNGRVCCVVECVQVAVNVQTAAPRSISKVERKVLTAVATDEVQSQEALEK
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17421; Mature: 17289
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAANNVNDDTQNNLHVTEVDLRWADFDRFGHVNNAAFIEIAQEARLAFAEDQFRERGYEI CCCCCCCCCCCCCEEEEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC PAVFVRHLEVDYLRAILPDTTQAVVETQVTKIGNTSFSTRQEVKDRNGRVCCVVECVQVA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEHHHHHHHH VNVQTAAPRSISKVERKVLTAVATDEVQSQEALEK HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AANNVNDDTQNNLHVTEVDLRWADFDRFGHVNNAAFIEIAQEARLAFAEDQFRERGYEI CCCCCCCCCCCCEEEEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC PAVFVRHLEVDYLRAILPDTTQAVVETQVTKIGNTSFSTRQEVKDRNGRVCCVVECVQVA HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEHHHHHHHH VNVQTAAPRSISKVERKVLTAVATDEVQSQEALEK HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA