Click here to switch to the map view.

The map label for this gene is ycdJ [C]

Identifier: 145296413

GI number: 145296413

Start: 2560081

End: 2560935

Strand: Direct

Name: ycdJ [C]

Synonym: cgR_2327

Alternate gene names: 145296413

Gene position: 2560081-2560935 (Clockwise)

Preceding gene: 145296412

Following gene: 145296414

Centisome position: 77.25

GC content: 54.97

Gene sequence:

>855_bases
ATGCTTACCCAGGATCTAATGATTCCGCGCACCACCACTATTAACGATGTAGAAATCACATATTACGACTCTGAACACAC
CCGAAACCACCCCGATGACGTGCTTGTTCTCATTCACGGCACCTCAGGTTCCACCACAGCTCACTTCGGATTCCTTTACC
CGGTACTCGCAGCCCGACAGCAAGTTATTTCCATCGACTGGGCCCAGGTGGATCCTAGTCGCCCCCTCGAAACCGACGAC
CTCGTGGAACAGGTCACCACGACAATCCAACATCTGCTCCCCGGCCAGCAGGTCGTGTTGTTGGGATACTCGCTGGGCGC
AGTAATCGCAGCCAAAATCGCCGCAGATCACCCTGATCTGGTTGACCGCCTCATCCTCGTGTCCGGTTGGATCCGTACCG
ATCTTCAACAGCTTCTGCGAAACGACGTTTGGCATGCGCTTCGTCGATCAGGGGATGAGCAAGCCCTCCGCGAATACTCC
ACCTTTTGCGCCTTCGGCGGCCCCTTCCTCGCTACCAAGACTCTGTCTGATATACAGCCAGGAATGCAAGCCATGGTTTT
CGATGAGTTCGGCGACCAGCAAATGGAACTGAATCGACGTATCGATATCACCACCGAAGCAGAAACCATCACAGCCCCCA
CCCTGATCATTTCCTGTATCCATGACCAAATGGTGCCTACCCGTCATCAACTCGCTCTATTCGGGGCAATCGACAATTCC
CGTTTTGTGGAGATCCCTGCTGGACACGCCGTGGTCTTTGAGCGCCCCAGCGAGCTCAGCCACCACATCCAGCAGTTCAT
GGATAATCCGGACCAGTACGATGCCGGAACCATCATCCCCACCCCCAAACCGTAA

Upstream 100 bases:

>100_bases
GCTGGGCACCGCTATTGTCGTGGGCTTCCGCTGGAAGGAAACCAAGGGAATCCACCTCGTCGATGTCCGCTAACCGCACA
CCTAAAAAGCAGGAGTATTT

Downstream 100 bases:

>100_bases
TCATCCACCCCAGTCTTAAAGGGAAGAACACATGACTACCACTGAAGCCATCTACAAACGCACCGTCATCGTCGGGTCCG
GTTTTGCCGGCCTAGGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: Hydrolase; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Fold Protein; Esterase/Lipase/Thioesterase

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MLTQDLMIPRTTTINDVEITYYDSEHTRNHPDDVLVLIHGTSGSTTAHFGFLYPVLAARQQVISIDWAQVDPSRPLETDD
LVEQVTTTIQHLLPGQQVVLLGYSLGAVIAAKIAADHPDLVDRLILVSGWIRTDLQQLLRNDVWHALRRSGDEQALREYS
TFCAFGGPFLATKTLSDIQPGMQAMVFDEFGDQQMELNRRIDITTEAETITAPTLIISCIHDQMVPTRHQLALFGAIDNS
RFVEIPAGHAVVFERPSELSHHIQQFMDNPDQYDAGTIIPTPKP

Sequences:

>Translated_284_residues
MLTQDLMIPRTTTINDVEITYYDSEHTRNHPDDVLVLIHGTSGSTTAHFGFLYPVLAARQQVISIDWAQVDPSRPLETDD
LVEQVTTTIQHLLPGQQVVLLGYSLGAVIAAKIAADHPDLVDRLILVSGWIRTDLQQLLRNDVWHALRRSGDEQALREYS
TFCAFGGPFLATKTLSDIQPGMQAMVFDEFGDQQMELNRRIDITTEAETITAPTLIISCIHDQMVPTRHQLALFGAIDNS
RFVEIPAGHAVVFERPSELSHHIQQFMDNPDQYDAGTIIPTPKP
>Mature_284_residues
MLTQDLMIPRTTTINDVEITYYDSEHTRNHPDDVLVLIHGTSGSTTAHFGFLYPVLAARQQVISIDWAQVDPSRPLETDD
LVEQVTTTIQHLLPGQQVVLLGYSLGAVIAAKIAADHPDLVDRLILVSGWIRTDLQQLLRNDVWHALRRSGDEQALREYS
TFCAFGGPFLATKTLSDIQPGMQAMVFDEFGDQQMELNRRIDITTEAETITAPTLIISCIHDQMVPTRHQLALFGAIDNS
RFVEIPAGHAVVFERPSELSHHIQQFMDNPDQYDAGTIIPTPKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31761; Mature: 31761

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTQDLMIPRTTTINDVEITYYDSEHTRNHPDDVLVLIHGTSGSTTAHFGFLYPVLAARQ
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH
QVISIDWAQVDPSRPLETDDLVEQVTTTIQHLLPGQQVVLLGYSLGAVIAAKIAADHPDL
HHEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCHHH
VDRLILVSGWIRTDLQQLLRNDVWHALRRSGDEQALREYSTFCAFGGPFLATKTLSDIQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
GMQAMVFDEFGDQQMELNRRIDITTEAETITAPTLIISCIHDQMVPTRHQLALFGAIDNS
CHHHHHHHHCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCC
RFVEIPAGHAVVFERPSELSHHIQQFMDNPDQYDAGTIIPTPKP
EEEEECCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLTQDLMIPRTTTINDVEITYYDSEHTRNHPDDVLVLIHGTSGSTTAHFGFLYPVLAARQ
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH
QVISIDWAQVDPSRPLETDDLVEQVTTTIQHLLPGQQVVLLGYSLGAVIAAKIAADHPDL
HHEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCHHH
VDRLILVSGWIRTDLQQLLRNDVWHALRRSGDEQALREYSTFCAFGGPFLATKTLSDIQP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
GMQAMVFDEFGDQQMELNRRIDITTEAETITAPTLIISCIHDQMVPTRHQLALFGAIDNS
CHHHHHHHHCCCHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCC
RFVEIPAGHAVVFERPSELSHHIQQFMDNPDQYDAGTIIPTPKP
EEEEECCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA