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The map label for this gene is insF1 [H]

Identifier: 145296409

GI number: 145296409

Start: 2556240

End: 2557169

Strand: Reverse

Name: insF1 [H]

Synonym: cgR_2323

Alternate gene names: 145296409

Gene position: 2557169-2556240 (Counterclockwise)

Preceding gene: 145296410

Following gene: 145296406

Centisome position: 77.16

GC content: 50.22

Gene sequence:

>930_bases
TTGCCTCGAAACCACAAAAATAGAGTGCTACCAGCTCATGGAGGTTTCAGAAGGCAAATTACAGCATTGTGCGCATGGCC
CGAGTGCTCAAAGTATCACGATCCGGGTTTTATAAATGGTCCAATAAAAACAAACAACCCCAGCTCAGGTACGAGTTCCA
AAGCTTGCTTGATGAACGTGTTCTGCAGTACTGGACCTAAGTCCCATAAAACCTATGGGGCGCCACGTATCACCGCTGAC
TTACACGATGAAGGAATTGATGTGGATCGGAAAACAGTAGCGAAATCAATGCGCCGGCAAGGTATTGAAGGGATCTCACC
GCGTTCCTGGGTGCCGGTCACAACGATTCCTGGAACGTTGTCACATAACATCCCTGACCGGGTGAAACGCGATTTTGATA
CCGGTGCACTTAACCGGGTATGGATTTCCGATATCACGTATCTGAAAACGAATCAGGGCTGGCTGTACCTCTGTGTCGTG
CGTGATGGTTGCTCACGGCGTGTGCTGGGATGGGCTATGGATGATACTCAAACGACACGGCTTGTTGAGCGTGCGTTGCG
GATGGCTCATACGTTGCGGCGTGGTGTGCTTGATGGTGTGGTTTTTCACGCTGATCGGGGCACGCAGTTCACATCGGATC
AGTTGTATCGGGTGTGTCAGGAATTAGGGATCGCTCAGTCGATGGGCCGGACTGGGGTGTGTTTTGATAATTCGATGGCC
GAGTCTTTTTGGTCAACGTTAAAGAATGAGTTTTATGATCGCCGTTGGTGGGCTACTCGTGATGAGGTGTGTGGTGAGGT
CGCTCGATGGATTGAGGTGTTTTATAACCGTCAGCGTAGGCATTCCGCGCTCGGGTTTATCCCTCCTGTTCAGTTTGAAC
AGGATCATGCTCGTCCTGTTCGATCTGTAGGAAACCAACAAGTAGCTTAA

Upstream 100 bases:

>100_bases
GATCAGCGCGAATGAACGTCAAGAACCTATCCGACTCCGCAAAGAAAACGCTGAACTCAAACTCGATAACGAGTTGCTTT
AAGAAAAGCAGCAGCCTTGC

Downstream 100 bases:

>100_bases
CTATGTGTCCACCACTTGCGGGCAACCCCATCTTCAGCTTGGTCGGACCACTGTAGTGGATGAGCATGTCTAGGATCAGT
GGCTTGGTTATGATCTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MPRNHKNRVLPAHGGFRRQITALCAWPECSKYHDPGFINGPIKTNNPSSGTSSKACLMNVFCSTGPKSHKTYGAPRITAD
LHDEGIDVDRKTVAKSMRRQGIEGISPRSWVPVTTIPGTLSHNIPDRVKRDFDTGALNRVWISDITYLKTNQGWLYLCVV
RDGCSRRVLGWAMDDTQTTRLVERALRMAHTLRRGVLDGVVFHADRGTQFTSDQLYRVCQELGIAQSMGRTGVCFDNSMA
ESFWSTLKNEFYDRRWWATRDEVCGEVARWIEVFYNRQRRHSALGFIPPVQFEQDHARPVRSVGNQQVA

Sequences:

>Translated_309_residues
MPRNHKNRVLPAHGGFRRQITALCAWPECSKYHDPGFINGPIKTNNPSSGTSSKACLMNVFCSTGPKSHKTYGAPRITAD
LHDEGIDVDRKTVAKSMRRQGIEGISPRSWVPVTTIPGTLSHNIPDRVKRDFDTGALNRVWISDITYLKTNQGWLYLCVV
RDGCSRRVLGWAMDDTQTTRLVERALRMAHTLRRGVLDGVVFHADRGTQFTSDQLYRVCQELGIAQSMGRTGVCFDNSMA
ESFWSTLKNEFYDRRWWATRDEVCGEVARWIEVFYNRQRRHSALGFIPPVQFEQDHARPVRSVGNQQVA
>Mature_308_residues
PRNHKNRVLPAHGGFRRQITALCAWPECSKYHDPGFINGPIKTNNPSSGTSSKACLMNVFCSTGPKSHKTYGAPRITADL
HDEGIDVDRKTVAKSMRRQGIEGISPRSWVPVTTIPGTLSHNIPDRVKRDFDTGALNRVWISDITYLKTNQGWLYLCVVR
DGCSRRVLGWAMDDTQTTRLVERALRMAHTLRRGVLDGVVFHADRGTQFTSDQLYRVCQELGIAQSMGRTGVCFDNSMAE
SFWSTLKNEFYDRRWWATRDEVCGEVARWIEVFYNRQRRHSALGFIPPVQFEQDHARPVRSVGNQQVA

Specific function: Involved in the transposition of the insertion sequence IS3 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=184, Percent_Identity=33.1521739130435, Blast_Score=97, Evalue=2e-20,
Organism=Escherichia coli, GI1788405, Length=238, Percent_Identity=38.2352941176471, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI1787263, Length=238, Percent_Identity=38.2352941176471, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI1786753, Length=238, Percent_Identity=38.2352941176471, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI1786570, Length=238, Percent_Identity=38.2352941176471, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI1786490, Length=238, Percent_Identity=38.2352941176471, Blast_Score=151, Evalue=5e-38,
Organism=Escherichia coli, GI1789981, Length=231, Percent_Identity=28.1385281385281, Blast_Score=101, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 35127; Mature: 34996

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRNHKNRVLPAHGGFRRQITALCAWPECSKYHDPGFINGPIKTNNPSSGTSSKACLMNV
CCCCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
FCSTGPKSHKTYGAPRITADLHDEGIDVDRKTVAKSMRRQGIEGISPRSWVPVTTIPGTL
HHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCC
SHNIPDRVKRDFDTGALNRVWISDITYLKTNQGWLYLCVVRDGCSRRVLGWAMDDTQTTR
CCCCHHHHHHCCCCCCCCHHHHHCEEEEEECCCEEEEEEECCCCCCCEEEEECCCHHHHH
LVERALRMAHTLRRGVLDGVVFHADRGTQFTSDQLYRVCQELGIAQSMGRTGVCFDNSMA
HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECHHHH
ESFWSTLKNEFYDRRWWATRDEVCGEVARWIEVFYNRQRRHSALGFIPPVQFEQDHARPV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
RSVGNQQVA
HHCCCCCCC
>Mature Secondary Structure 
PRNHKNRVLPAHGGFRRQITALCAWPECSKYHDPGFINGPIKTNNPSSGTSSKACLMNV
CCCCCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
FCSTGPKSHKTYGAPRITADLHDEGIDVDRKTVAKSMRRQGIEGISPRSWVPVTTIPGTL
HHCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEECCCCCC
SHNIPDRVKRDFDTGALNRVWISDITYLKTNQGWLYLCVVRDGCSRRVLGWAMDDTQTTR
CCCCHHHHHHCCCCCCCCHHHHHCEEEEEECCCEEEEEEECCCCCCCEEEEECCCHHHHH
LVERALRMAHTLRRGVLDGVVFHADRGTQFTSDQLYRVCQELGIAQSMGRTGVCFDNSMA
HHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEECHHHH
ESFWSTLKNEFYDRRWWATRDEVCGEVARWIEVFYNRQRRHSALGFIPPVQFEQDHARPV
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
RSVGNQQVA
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987844; 9278503 [H]