| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is benA [H]
Identifier: 145296381
GI number: 145296381
Start: 2528812
End: 2530089
Strand: Direct
Name: benA [H]
Synonym: cgR_2295
Alternate gene names: 145296381
Gene position: 2528812-2530089 (Clockwise)
Preceding gene: 145296380
Following gene: 145296382
Centisome position: 76.3
GC content: 51.33
Gene sequence:
>1278_bases ATGACCACCACAACTAGTAACCAGACCCGATTCTCTGACCTGGTCGAAGACGACCGTGTCGCTGGCCAGCTGTACACCGA TCCTGAAATCTTCAAAGAAGAAATGGAGAAGATTTTCTATAAGACCTGGGTATGGGTCGCTCACGAAAGTGAAATCCCAG AGGCCGGATCATTTAAGACCACATGGGTAGGCGATCAGCCTGTCATTGTAAACCGAGATCGCAAGGGCAACTTCAACACT CTGCTCAACCGCTGCCGCCACCGTGGAGCAACAGTCTGTGACCAGCGAAAAGGCAAAGCAAACGGATTTACTTGCCCTTA CCACAACTGGTCCTACACCCACGATGGTCGTCTACGCGGAGTTCCTTACCCTGACGGATACGAAGGTGTGTTGAAAAAGG AAGAGCTTGGCCTTCAAACTCTCCGAACCGAGAGCTACCTCGGTATGATTTTTGCCACCTTCAATGAAGACATCGAGCCT CTAGAAGATCACCTAGGTGACGCCAAGATTTGGATGGAACGATTCCTCAAGCAGACCAATGGATACCCTTGCAAGGTCAT TGGCGCACACAAGTTCCGCTTCAACGGCAACTGGAAGATCCAGCTGGAAAATACAACCGACGGCTACCACTTCCCTATGG TTCACAAATCATGGATGGCCTCCGTCGACGCAGAAACCGCCGACATGATGTCCTTCATGGATGATCCTGAAGCAGTTACT CACGCACTTGGAAATGGTCACAGTGTTGGAATTATGGCCACTGCTCATATCGATTTGGATGAAGACGACGGAACTGAAGA AATCCAGCCACGCTTCAATCACCTCGTTAAAGAACTTGAAGAAGCCGGCGAAAGCCCAGAGCGAATCCGACGCTTCATGC GATCCATGCACGGTTGTGGCTTCAACCTCAACATGTTCCCCAACATCGCAATGTCTTCTTCATTCTTCCGCGTTCTAATT CCAATCTCTGTGAACGAGACCGAAATTTGGCACATGGCTATCGGCATGGACGGCGGTCCAGAAAGCATCAACCAGGAAAG GCTCCGCATTCACGAGCACTTCCAAGGACCATTCGGATTCGGAAGCCCCGACGATGCTGAAGGTTGGGACCGAGTTCAGA TCGGTGCCGGCGGCAACCCCAAGATGCCCATCCTGATCAACCGCGGACTTGAGCGCGAATACACAACCGAAGAAAACTGG CCAACCTCCCATGTCACCGATGAAACCGGCATGCGCGAGGCTTACTACAAGTGGAAGAAGCTGATGAGCAATGACTAA
Upstream 100 bases:
>100_bases ACGCTCTATGGCGCTACTTCAAGATCGAAGCTCGCATGGGCAGAGAACTGACCATCCGTGACGACGTTGTCGTCTGATCA AAAAACTGAAAGGACTCACC
Downstream 100 bases:
>100_bases CACCACCCTCCAGACTGAACTGACCAACACCAGCTTCCTAAACGATGAGCGAGTTTTACGCGCCATCCAGCTGATCTGGC ACGAAGCTGCCCTGCTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MTTTTSNQTRFSDLVEDDRVAGQLYTDPEIFKEEMEKIFYKTWVWVAHESEIPEAGSFKTTWVGDQPVIVNRDRKGNFNT LLNRCRHRGATVCDQRKGKANGFTCPYHNWSYTHDGRLRGVPYPDGYEGVLKKEELGLQTLRTESYLGMIFATFNEDIEP LEDHLGDAKIWMERFLKQTNGYPCKVIGAHKFRFNGNWKIQLENTTDGYHFPMVHKSWMASVDAETADMMSFMDDPEAVT HALGNGHSVGIMATAHIDLDEDDGTEEIQPRFNHLVKELEEAGESPERIRRFMRSMHGCGFNLNMFPNIAMSSSFFRVLI PISVNETEIWHMAIGMDGGPESINQERLRIHEHFQGPFGFGSPDDAEGWDRVQIGAGGNPKMPILINRGLEREYTTEENW PTSHVTDETGMREAYYKWKKLMSND
Sequences:
>Translated_425_residues MTTTTSNQTRFSDLVEDDRVAGQLYTDPEIFKEEMEKIFYKTWVWVAHESEIPEAGSFKTTWVGDQPVIVNRDRKGNFNT LLNRCRHRGATVCDQRKGKANGFTCPYHNWSYTHDGRLRGVPYPDGYEGVLKKEELGLQTLRTESYLGMIFATFNEDIEP LEDHLGDAKIWMERFLKQTNGYPCKVIGAHKFRFNGNWKIQLENTTDGYHFPMVHKSWMASVDAETADMMSFMDDPEAVT HALGNGHSVGIMATAHIDLDEDDGTEEIQPRFNHLVKELEEAGESPERIRRFMRSMHGCGFNLNMFPNIAMSSSFFRVLI PISVNETEIWHMAIGMDGGPESINQERLRIHEHFQGPFGFGSPDDAEGWDRVQIGAGGNPKMPILINRGLEREYTTEENW PTSHVTDETGMREAYYKWKKLMSND >Mature_424_residues TTTTSNQTRFSDLVEDDRVAGQLYTDPEIFKEEMEKIFYKTWVWVAHESEIPEAGSFKTTWVGDQPVIVNRDRKGNFNTL LNRCRHRGATVCDQRKGKANGFTCPYHNWSYTHDGRLRGVPYPDGYEGVLKKEELGLQTLRTESYLGMIFATFNEDIEPL EDHLGDAKIWMERFLKQTNGYPCKVIGAHKFRFNGNWKIQLENTTDGYHFPMVHKSWMASVDAETADMMSFMDDPEAVTH ALGNGHSVGIMATAHIDLDEDDGTEEIQPRFNHLVKELEEAGESPERIRRFMRSMHGCGFNLNMFPNIAMSSSFFRVLIP ISVNETEIWHMAIGMDGGPESINQERLRIHEHFQGPFGFGSPDDAEGWDRVQIGAGGNPKMPILINRGLEREYTTEENWP TSHVTDETGMREAYYKWKKLMSND
Specific function: Degradation of benzoate to 2-hydro-1,2-dihydroxybenzoate (DHB) [H]
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
Organism=Escherichia coli, GI1788888, Length=431, Percent_Identity=29.9303944315545, Blast_Score=176, Evalue=2e-45, Organism=Escherichia coli, GI1788103, Length=208, Percent_Identity=26.4423076923077, Blast_Score=89, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017639 - InterPro: IPR017941 - InterPro: IPR015881 - InterPro: IPR015879 - InterPro: IPR001663 [H]
Pfam domain/function: PF00355 Rieske; PF00848 Ring_hydroxyl_A [H]
EC number: =1.14.12.10 [H]
Molecular weight: Translated: 48768; Mature: 48637
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTTSNQTRFSDLVEDDRVAGQLYTDPEIFKEEMEKIFYKTWVWVAHESEIPEAGSFKT CCCCCCCCHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEE TWVGDQPVIVNRDRKGNFNTLLNRCRHRGATVCDQRKGKANGFTCPYHNWSYTHDGRLRG EEECCCCEEEECCCCCCHHHHHHHHHHCCCCCHHCCCCCCCCEECCCCCCCCCCCCEEEC VPYPDGYEGVLKKEELGLQTLRTESYLGMIFATFNEDIEPLEDHLGDAKIWMERFLKQTN CCCCCCCHHHHHHHHHCHHHHHHHHHHEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHCC GYPCKVIGAHKFRFNGNWKIQLENTTDGYHFPMVHKSWMASVDAETADMMSFMDDPEAVT CCCEEEEEEEEEEECCCEEEEEECCCCCEECCHHHHHHHHHCCCHHHHHHHHCCCHHHHH HALGNGHSVGIMATAHIDLDEDDGTEEIQPRFNHLVKELEEAGESPERIRRFMRSMHGCG HHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC FNLNMFPNIAMSSSFFRVLIPISVNETEIWHMAIGMDGGPESINQERLRIHEHFQGPFGF CCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCC GSPDDAEGWDRVQIGAGGNPKMPILINRGLEREYTTEENWPTSHVTDETGMREAYYKWKK CCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LMSND HHCCC >Mature Secondary Structure TTTTSNQTRFSDLVEDDRVAGQLYTDPEIFKEEMEKIFYKTWVWVAHESEIPEAGSFKT CCCCCCCHHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEE TWVGDQPVIVNRDRKGNFNTLLNRCRHRGATVCDQRKGKANGFTCPYHNWSYTHDGRLRG EEECCCCEEEECCCCCCHHHHHHHHHHCCCCCHHCCCCCCCCEECCCCCCCCCCCCEEEC VPYPDGYEGVLKKEELGLQTLRTESYLGMIFATFNEDIEPLEDHLGDAKIWMERFLKQTN CCCCCCCHHHHHHHHHCHHHHHHHHHHEEEEEECCCCHHHHHHHCCHHHHHHHHHHHHCC GYPCKVIGAHKFRFNGNWKIQLENTTDGYHFPMVHKSWMASVDAETADMMSFMDDPEAVT CCCEEEEEEEEEEECCCEEEEEECCCCCEECCHHHHHHHHHCCCHHHHHHHHCCCHHHHH HALGNGHSVGIMATAHIDLDEDDGTEEIQPRFNHLVKELEEAGESPERIRRFMRSMHGCG HHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC FNLNMFPNIAMSSSFFRVLIPISVNETEIWHMAIGMDGGPESINQERLRIHEHFQGPFGF CCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCC GSPDDAEGWDRVQIGAGGNPKMPILINRGLEREYTTEENWPTSHVTDETGMREAYYKWKK CCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LMSND HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1885518 [H]