| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is catA [H]
Identifier: 145296369
GI number: 145296369
Start: 2514266
End: 2515123
Strand: Reverse
Name: catA [H]
Synonym: cgR_2284
Alternate gene names: 145296369
Gene position: 2515123-2514266 (Counterclockwise)
Preceding gene: 145296370
Following gene: 145296368
Centisome position: 75.89
GC content: 55.48
Gene sequence:
>858_bases ATGACTTCAGCTGAACAGATCGTTGATCCAACAGCCCACGATTCGGGCAACAAGGCAACTGACAAGTTCAAGGCAAACCG CGTTTCCTCCGATACCTCCAAGGAACGCGCAAACGCAATCTACGTAGATCTGCTCGCGGCGATCGCCCAGGTTGCTCACA AGCACGAAGTCACCTACGAAGAGTACGCAGTGCTCAAGCAGTGGATGATCGACGTTGGAGAATACGGCGAGTGGCCACTG TGGTTGGACGTTTTCGTTGAGCATGAGATCGAAGAGATCAACTACAACCGCCACGACTACACCGGAACCAAGGGTTCCAT CGAAGGCCCTTATTACGTAGAGAACTCTCCTAAGCTTCCTTGGGATGCTGAGATGCCAATGCGTGACAAGGATCGCGCAT GCACCCCTCTGATCTTCGAAGGTCAGGTTACTGACCTCGACGGCAACGGTCTTGATGGAGCAGAAGTTGAGCTCTGGCAC GCAGATGAGGACGGATACTACTCCCAGTTCGCACCTGGAATCCCAGAGTGGAACCTGCGTGGCACCATCGTTACCGATGA GGAAGGCCGCTACAAGATCAAGACCCTGCAGCCTGCGCCTTACCAGATCCCTCATGATGGCCCAACCGGTTGGTTCATTG AGTCTTACGGTGGGCACCCATGGCGCCCAGCCCACCTCCACTTGCGCGTTTCCCACCCGGGCTACCGCACCATCACCACC CAGCTTTACTTCGAGGGTGGCGAGTGGGTCGAAAACGACGTTGCAACCGCTGTGAAGCCAGAACTGATCCTGCACCCTGA GACTGGCGAGGATGGTAACCACGTTCACTACCCATTCGTCCTGGATAAGGAAGACTAG
Upstream 100 bases:
>100_bases AGTGTTGTTATCGAGTTCAACCGATCACAAAGATTTTTACGCTAGGCAGTGATCCGACTCGCACCCCCTACTTCACCCCC AAAGTCTCTAGGAGTATGAC
Downstream 100 bases:
>100_bases TTTTTCTACCTAGCTAGCATTGAAGTCCCGACCACATCTTGTGGCGGGACTTTTCCCACTTAACCAGAAAGCCATAGAAA AATTGTCTGATTTAACCATC
Product: hypothetical protein
Products: NA
Alternate protein names: 1,2-CTD [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MTSAEQIVDPTAHDSGNKATDKFKANRVSSDTSKERANAIYVDLLAAIAQVAHKHEVTYEEYAVLKQWMIDVGEYGEWPL WLDVFVEHEIEEINYNRHDYTGTKGSIEGPYYVENSPKLPWDAEMPMRDKDRACTPLIFEGQVTDLDGNGLDGAEVELWH ADEDGYYSQFAPGIPEWNLRGTIVTDEEGRYKIKTLQPAPYQIPHDGPTGWFIESYGGHPWRPAHLHLRVSHPGYRTITT QLYFEGGEWVENDVATAVKPELILHPETGEDGNHVHYPFVLDKED
Sequences:
>Translated_285_residues MTSAEQIVDPTAHDSGNKATDKFKANRVSSDTSKERANAIYVDLLAAIAQVAHKHEVTYEEYAVLKQWMIDVGEYGEWPL WLDVFVEHEIEEINYNRHDYTGTKGSIEGPYYVENSPKLPWDAEMPMRDKDRACTPLIFEGQVTDLDGNGLDGAEVELWH ADEDGYYSQFAPGIPEWNLRGTIVTDEEGRYKIKTLQPAPYQIPHDGPTGWFIESYGGHPWRPAHLHLRVSHPGYRTITT QLYFEGGEWVENDVATAVKPELILHPETGEDGNHVHYPFVLDKED >Mature_284_residues TSAEQIVDPTAHDSGNKATDKFKANRVSSDTSKERANAIYVDLLAAIAQVAHKHEVTYEEYAVLKQWMIDVGEYGEWPLW LDVFVEHEIEEINYNRHDYTGTKGSIEGPYYVENSPKLPWDAEMPMRDKDRACTPLIFEGQVTDLDGNGLDGAEVELWHA DEDGYYSQFAPGIPEWNLRGTIVTDEEGRYKIKTLQPAPYQIPHDGPTGWFIESYGGHPWRPAHLHLRVSHPGYRTITTQ LYFEGGEWVENDVATAVKPELILHPETGEDGNHVHYPFVLDKED
Specific function: Unknown
COG id: COG3485
COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007535 - InterPro: IPR012800 - InterPro: IPR000627 - InterPro: IPR015889 [H]
Pfam domain/function: PF00775 Dioxygenase_C; PF04444 Dioxygenase_N [H]
EC number: =1.13.11.1 [H]
Molecular weight: Translated: 32441; Mature: 32310
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: PS00083 INTRADIOL_DIOXYGENAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSAEQIVDPTAHDSGNKATDKFKANRVSSDTSKERANAIYVDLLAAIAQVAHKHEVTYE CCCHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH EYAVLKQWMIDVGEYGEWPLWLDVFVEHEIEEINYNRHDYTGTKGSIEGPYYVENSPKLP HHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCC WDAEMPMRDKDRACTPLIFEGQVTDLDGNGLDGAEVELWHADEDGYYSQFAPGIPEWNLR CCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCCEEEEEECCCCCCHHHCCCCCCCCCCE GTIVTDEEGRYKIKTLQPAPYQIPHDGPTGWFIESYGGHPWRPAHLHLRVSHPGYRTITT EEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCEEEEE QLYFEGGEWVENDVATAVKPELILHPETGEDGNHVHYPFVLDKED EEEECCCCCCCCCHHHHCCCEEEECCCCCCCCCEEEEEEEEECCC >Mature Secondary Structure TSAEQIVDPTAHDSGNKATDKFKANRVSSDTSKERANAIYVDLLAAIAQVAHKHEVTYE CCHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH EYAVLKQWMIDVGEYGEWPLWLDVFVEHEIEEINYNRHDYTGTKGSIEGPYYVENSPKLP HHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCC WDAEMPMRDKDRACTPLIFEGQVTDLDGNGLDGAEVELWHADEDGYYSQFAPGIPEWNLR CCCCCCCCCCCCCCCCEEECCEEEECCCCCCCCCEEEEEECCCCCCHHHCCCCCCCCCCE GTIVTDEEGRYKIKTLQPAPYQIPHDGPTGWFIESYGGHPWRPAHLHLRVSHPGYRTITT EEEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCEEEEE QLYFEGGEWVENDVATAVKPELILHPETGEDGNHVHYPFVLDKED EEEECCCCCCCCCHHHHCCCEEEECCCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8990288 [H]