| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yhhW [C]
Identifier: 145296335
GI number: 145296335
Start: 2480628
End: 2481671
Strand: Direct
Name: yhhW [C]
Synonym: cgR_2250
Alternate gene names: 145296335
Gene position: 2480628-2481671 (Clockwise)
Preceding gene: 145296334
Following gene: 145296336
Centisome position: 74.85
GC content: 54.98
Gene sequence:
>1044_bases ATGTCAAACGCAGAAATTAATCCCGTTGAATATGAAATCAACAACCACGCCCCTGGTACCGCGCTAAACCCACAGTGCGA AGACGGCGCCAACGTAGAAATCATCACCTCCCGTGAAGTCCCCCTCGGCGGACCACGCGCCATGACCGTGCACCGCACAC TCCCCCAACGCCAGCGCTCCCTCATCGGTGCCTGGTGTTTTGTGGATCATTACGGCCCCGATGATGTCTCACTAACCGGT GGCATGGATATGGCCTCCCACCCGCACACCGGATTGCAAACAGTCACGTGGCTTTTTGAAGGCGAAGTCACCCACCATGA TTCCGGCGGAAATCACGCAGTCGTGCTTCCTGGCGAAGTCAACCTCATGACCGCCGGCGCAGGCATCTGTCACACCGAAG TTTCCGCCACCGCCACCACGATTCTGCATGGTCTGCAGTTGTGGACAGTTCTTCCTGACAAAGACCGCGAAGGACCACGC CGCTTTGATCACTACGCTCCAGAAGAAATCACACTCGAAGGCGGAAGAGCACGCGTTTTCCTAGGTTCGCTATTTGGTCA AACCTCCCCTGTTCATACGTTTACTCCCCTACTTGGCGCAGAAATCCACATCAATCCAGGTGAAGCAGTCATCTTTGATG TTGATCCCACGTTTGAACACGGCTTGCTTGTCGATTCCGGCGACGTCCAACTAGAAGGCGTCACCGTCGAGCCCACCCAG CTGGCCTACACCGGCATCAATGAAACCCAACTCCGAATCCGCAACATCGGCCCCACACCGGCGCGTACTGTACTGCTAGG TGGCGAACCATTTACCGAAGACATCGTGATGTGGTGGAACTTCATTGGCCGCAGCCATGAAGAAATTGCCGAGTACCGTA AACAGTGGCAGGCCGAAGCTGATCGTTTTGGTATCACCCACGGATATATCAGCCACCATAAAGATGGGCTCACCAGGCTT CCAGCACCCGAGCTTCCCAACGCTGCTATCAAGGCACGTAAAAACCCAGCACCAACTGCACGACCAGAAACGAGAATTGA TTAA
Upstream 100 bases:
>100_bases CAGCCATCAAGGCACTTGAATCCGGACGCTAAGTTGTTGATGCATCAACTTATTTCTTGGCTATACTTGAGGCCACGTTT CCTCAGCTCAGGAGAAGTCC
Downstream 100 bases:
>100_bases ATGCGCTCCGCTCACGGCCCATACATTGATAAGTTCTTCCCCGAGCCATACAAGAACATGCTCGAGCTCACCAAGACTCT GCGAAAGATCTACCCGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA1205 [H]
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MSNAEINPVEYEINNHAPGTALNPQCEDGANVEIITSREVPLGGPRAMTVHRTLPQRQRSLIGAWCFVDHYGPDDVSLTG GMDMASHPHTGLQTVTWLFEGEVTHHDSGGNHAVVLPGEVNLMTAGAGICHTEVSATATTILHGLQLWTVLPDKDREGPR RFDHYAPEEITLEGGRARVFLGSLFGQTSPVHTFTPLLGAEIHINPGEAVIFDVDPTFEHGLLVDSGDVQLEGVTVEPTQ LAYTGINETQLRIRNIGPTPARTVLLGGEPFTEDIVMWWNFIGRSHEEIAEYRKQWQAEADRFGITHGYISHHKDGLTRL PAPELPNAAIKARKNPAPTARPETRID
Sequences:
>Translated_347_residues MSNAEINPVEYEINNHAPGTALNPQCEDGANVEIITSREVPLGGPRAMTVHRTLPQRQRSLIGAWCFVDHYGPDDVSLTG GMDMASHPHTGLQTVTWLFEGEVTHHDSGGNHAVVLPGEVNLMTAGAGICHTEVSATATTILHGLQLWTVLPDKDREGPR RFDHYAPEEITLEGGRARVFLGSLFGQTSPVHTFTPLLGAEIHINPGEAVIFDVDPTFEHGLLVDSGDVQLEGVTVEPTQ LAYTGINETQLRIRNIGPTPARTVLLGGEPFTEDIVMWWNFIGRSHEEIAEYRKQWQAEADRFGITHGYISHHKDGLTRL PAPELPNAAIKARKNPAPTARPETRID >Mature_346_residues SNAEINPVEYEINNHAPGTALNPQCEDGANVEIITSREVPLGGPRAMTVHRTLPQRQRSLIGAWCFVDHYGPDDVSLTGG MDMASHPHTGLQTVTWLFEGEVTHHDSGGNHAVVLPGEVNLMTAGAGICHTEVSATATTILHGLQLWTVLPDKDREGPRR FDHYAPEEITLEGGRARVFLGSLFGQTSPVHTFTPLLGAEIHINPGEAVIFDVDPTFEHGLLVDSGDVQLEGVTVEPTQL AYTGINETQLRIRNIGPTPARTVLLGGEPFTEDIVMWWNFIGRSHEEIAEYRKQWQAEADRFGITHGYISHHKDGLTRLP APELPNAAIKARKNPAPTARPETRID
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=213, Percent_Identity=30.0469483568075, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI4505823, Length=213, Percent_Identity=30.0469483568075, Blast_Score=90, Evalue=3e-18, Organism=Escherichia coli, GI1789847, Length=186, Percent_Identity=27.9569892473118, Blast_Score=72, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 38030; Mature: 37899
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAEINPVEYEINNHAPGTALNPQCEDGANVEIITSREVPLGGPRAMTVHRTLPQRQRS CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEHHCCHHHHH LIGAWCFVDHYGPDDVSLTGGMDMASHPHTGLQTVTWLFEGEVTHHDSGGNHAVVLPGEV HEEEEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEEEECEEEECCCCCCEEEEECCCE NLMTAGAGICHTEVSATATTILHGLQLWTVLPDKDREGPRRFDHYAPEEITLEGGRARVF EEEECCCCEEECCHHHHHHHHHHHHEEEEECCCCCCCCCHHHHCCCCCEEEEECCCEEEE LGSLFGQTSPVHTFTPLLGAEIHINPGEAVIFDVDPTFEHGLLVDSGDVQLEGVTVEPTQ EEHHHCCCCCCEEEHHHHCCEEEECCCCEEEEECCCCCCCCEEEECCCEEEEEEEECCCE LAYTGINETQLRIRNIGPTPARTVLLGGEPFTEDIVMWWNFIGRSHEEIAEYRKQWQAEA EEEECCCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DRFGITHGYISHHKDGLTRLPAPELPNAAIKARKNPAPTARPETRID HHCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure SNAEINPVEYEINNHAPGTALNPQCEDGANVEIITSREVPLGGPRAMTVHRTLPQRQRS CCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEHHCCHHHHH LIGAWCFVDHYGPDDVSLTGGMDMASHPHTGLQTVTWLFEGEVTHHDSGGNHAVVLPGEV HEEEEEEEECCCCCCEEEECCCCCCCCCCCCCEEEEEEEECEEEECCCCCCEEEEECCCE NLMTAGAGICHTEVSATATTILHGLQLWTVLPDKDREGPRRFDHYAPEEITLEGGRARVF EEEECCCCEEECCHHHHHHHHHHHHEEEEECCCCCCCCCHHHHCCCCCEEEEECCCEEEE LGSLFGQTSPVHTFTPLLGAEIHINPGEAVIFDVDPTFEHGLLVDSGDVQLEGVTVEPTQ EEHHHCCCCCCEEEHHHHCCEEEECCCCEEEEECCCCCCCCEEEECCCEEEEEEEECCCE LAYTGINETQLRIRNIGPTPARTVLLGGEPFTEDIVMWWNFIGRSHEEIAEYRKQWQAEA EEEECCCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DRFGITHGYISHHKDGLTRLPAPELPNAAIKARKNPAPTARPETRID HHCCCCCCHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]