| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is dkgA [H]
Identifier: 145296327
GI number: 145296327
Start: 2473448
End: 2474305
Strand: Reverse
Name: dkgA [H]
Synonym: cgR_2242
Alternate gene names: 145296327
Gene position: 2474305-2473448 (Counterclockwise)
Preceding gene: 145296331
Following gene: 145296325
Centisome position: 74.66
GC content: 51.52
Gene sequence:
>858_bases ATGCAATCTTTGATGGATCAGAAGAATAAGCTTTCGAAGTCTGAAGGTATCCCATTGGTCACCTTGAATGATGGAAAAAC CATTCCTCAGCTTGGTTTTGGTGTGTTCAAGGTAGATCCCGATGAAGCAGAGCGCGTAGTTACCGAAGCACTTGAGGTAG GTTACCGCCACATCGATACTGCTGCGATTTACGGCAATGAGGAAGGTGTCGGCCGAGCTATTGCTAAGTCCGGCATTCCT CGTGAAGAGCTGTTTATTACTACCAAGTTGTGGAACGATCGCCACCTGGATGTAGAAGCTGCTTTTGAGGAGTCTCTGCA GAAGCTGGGCTTGGATTATGTAGATCTGTACTTGGTGCACTGGCCGGCACCGAAGAACGATAATTATGTTGCTGCATGGA AGGGCTTGGAAAAGCTCGGTGACCGTGCTCGTTCCATCGGTGTGTGTAACTTCCTGCCAGAGCACCTAGAAAAGCTGCTG GCAGAGGCAACCACTGTGCCTGCCATTAACCAGATTGAGCTGCACCCAGCTTTGCAGCAGCGCGATGCTGTTGAGGCATC TCTTGCAGCAGGCATCACTGTGGAGTCGTGGGGTCCTCTGGGACAGGGGCGTTTTGATCTTGGCGCTGAGGAACCAATCG CAGCTGCAGCGAAGAACCACGGAAAGACCCCAGCTCAGGTTGTTATCCGTTGGCACCTGCAGAACGGTTTCGTTGTGTTC CCCAAGACTGTGACTAAGAGCCGCATGGCGGAAAACATCGACGTGTTTGATTTCGAACTCAGTGATGAGGAGATGGCTGC GATCACTGCTCTTGAGCGCAATGATCGTGGTGGTTCACACCCGAATGATCTGAACTAG
Upstream 100 bases:
>100_bases TCAACCTAAGGCGCATTTTGGTGCGCATCAAGGAGAAAATATGTCTGTTGTGGGTACCGGCCAATTCTTTGGATCCCCGG AGGAAGAGCGGGATAAGTTG
Downstream 100 bases:
>100_bases AAATAAGGTAAGGCCCTGCACTTCACATAAGTGCAGGGCCTTAATTTGTTTTTGGTGTCTTAGCCGAGGAAGTCAGTCTC GGTAAACTTGCGATCGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: 2,5-DKG reductase A; 2,5-DKGR A; 25DKGR-A; AKR5C [H]
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MQSLMDQKNKLSKSEGIPLVTLNDGKTIPQLGFGVFKVDPDEAERVVTEALEVGYRHIDTAAIYGNEEGVGRAIAKSGIP REELFITTKLWNDRHLDVEAAFEESLQKLGLDYVDLYLVHWPAPKNDNYVAAWKGLEKLGDRARSIGVCNFLPEHLEKLL AEATTVPAINQIELHPALQQRDAVEASLAAGITVESWGPLGQGRFDLGAEEPIAAAAKNHGKTPAQVVIRWHLQNGFVVF PKTVTKSRMAENIDVFDFELSDEEMAAITALERNDRGGSHPNDLN
Sequences:
>Translated_285_residues MQSLMDQKNKLSKSEGIPLVTLNDGKTIPQLGFGVFKVDPDEAERVVTEALEVGYRHIDTAAIYGNEEGVGRAIAKSGIP REELFITTKLWNDRHLDVEAAFEESLQKLGLDYVDLYLVHWPAPKNDNYVAAWKGLEKLGDRARSIGVCNFLPEHLEKLL AEATTVPAINQIELHPALQQRDAVEASLAAGITVESWGPLGQGRFDLGAEEPIAAAAKNHGKTPAQVVIRWHLQNGFVVF PKTVTKSRMAENIDVFDFELSDEEMAAITALERNDRGGSHPNDLN >Mature_285_residues MQSLMDQKNKLSKSEGIPLVTLNDGKTIPQLGFGVFKVDPDEAERVVTEALEVGYRHIDTAAIYGNEEGVGRAIAKSGIP REELFITTKLWNDRHLDVEAAFEESLQKLGLDYVDLYLVHWPAPKNDNYVAAWKGLEKLGDRARSIGVCNFLPEHLEKLL AEATTVPAINQIELHPALQQRDAVEASLAAGITVESWGPLGQGRFDLGAEEPIAAAAKNHGKTPAQVVIRWHLQNGFVVF PKTVTKSRMAENIDVFDFELSDEEMAAITALERNDRGGSHPNDLN
Specific function: Catalyzes the reduction of 2,5-diketo-D-gluconic acid (25DKG) to 2-keto-L-gulonic acid (2KLG). 5-keto-D-fructose and dihydroxyacetone can also serve as substrates. 25DKGR-A exhibits a greater selectivity for the substrate and higher thermal stability than
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase family [H]
Homologues:
Organism=Homo sapiens, GI24497577, Length=293, Percent_Identity=38.5665529010239, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI5174391, Length=293, Percent_Identity=38.5665529010239, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI223468663, Length=298, Percent_Identity=38.9261744966443, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI310109920, Length=298, Percent_Identity=38.255033557047, Blast_Score=186, Evalue=2e-47, Organism=Homo sapiens, GI5453543, Length=298, Percent_Identity=38.255033557047, Blast_Score=186, Evalue=2e-47, Organism=Homo sapiens, GI45446745, Length=298, Percent_Identity=38.255033557047, Blast_Score=186, Evalue=2e-47, Organism=Homo sapiens, GI4503285, Length=298, Percent_Identity=38.255033557047, Blast_Score=186, Evalue=2e-47, Organism=Homo sapiens, GI310109922, Length=279, Percent_Identity=39.426523297491, Blast_Score=183, Evalue=1e-46, Organism=Homo sapiens, GI24497585, Length=297, Percent_Identity=38.7205387205387, Blast_Score=180, Evalue=1e-45, Organism=Homo sapiens, GI24497583, Length=310, Percent_Identity=37.0967741935484, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI93277124, Length=303, Percent_Identity=35.6435643564356, Blast_Score=174, Evalue=6e-44, Organism=Homo sapiens, GI291291012, Length=273, Percent_Identity=38.0952380952381, Blast_Score=168, Evalue=6e-42, Organism=Homo sapiens, GI4502049, Length=291, Percent_Identity=39.1752577319588, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI5174695, Length=298, Percent_Identity=34.2281879194631, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI300116271, Length=276, Percent_Identity=32.9710144927536, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI300116273, Length=277, Percent_Identity=32.8519855595668, Blast_Score=131, Evalue=7e-31, Organism=Homo sapiens, GI310109926, Length=125, Percent_Identity=45.6, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI207028673, Length=125, Percent_Identity=45.6, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI310109924, Length=154, Percent_Identity=36.3636363636364, Blast_Score=95, Evalue=8e-20, Organism=Escherichia coli, GI87082198, Length=268, Percent_Identity=50.7462686567164, Blast_Score=276, Evalue=1e-75, Organism=Escherichia coli, GI1786400, Length=257, Percent_Identity=41.2451361867704, Blast_Score=176, Evalue=1e-45, Organism=Escherichia coli, GI1788081, Length=268, Percent_Identity=28.3582089552239, Blast_Score=80, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17537077, Length=305, Percent_Identity=35.4098360655738, Blast_Score=182, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17537075, Length=292, Percent_Identity=36.6438356164384, Blast_Score=178, Evalue=2e-45, Organism=Caenorhabditis elegans, GI71998625, Length=269, Percent_Identity=34.5724907063197, Blast_Score=171, Evalue=4e-43, Organism=Caenorhabditis elegans, GI17550248, Length=297, Percent_Identity=34.6801346801347, Blast_Score=159, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17566692, Length=299, Percent_Identity=33.7792642140468, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17564128, Length=299, Percent_Identity=35.7859531772575, Blast_Score=151, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17538386, Length=274, Percent_Identity=35.036496350365, Blast_Score=149, Evalue=1e-36, Organism=Caenorhabditis elegans, GI17561298, Length=270, Percent_Identity=34.0740740740741, Blast_Score=148, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17537079, Length=292, Percent_Identity=30.4794520547945, Blast_Score=136, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17562292, Length=282, Percent_Identity=30.1418439716312, Blast_Score=129, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17552492, Length=263, Percent_Identity=32.319391634981, Blast_Score=125, Evalue=2e-29, Organism=Caenorhabditis elegans, GI17561300, Length=268, Percent_Identity=29.8507462686567, Blast_Score=125, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6324694, Length=294, Percent_Identity=39.1156462585034, Blast_Score=215, Evalue=8e-57, Organism=Saccharomyces cerevisiae, GI6320576, Length=282, Percent_Identity=40.4255319148936, Blast_Score=210, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6322556, Length=257, Percent_Identity=34.6303501945525, Blast_Score=161, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6321896, Length=308, Percent_Identity=31.8181818181818, Blast_Score=148, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6319625, Length=302, Percent_Identity=33.112582781457, Blast_Score=142, Evalue=9e-35, Organism=Saccharomyces cerevisiae, GI6320079, Length=281, Percent_Identity=31.3167259786477, Blast_Score=113, Evalue=3e-26, Organism=Drosophila melanogaster, GI24644950, Length=300, Percent_Identity=38.6666666666667, Blast_Score=201, Evalue=6e-52, Organism=Drosophila melanogaster, GI221378297, Length=320, Percent_Identity=36.25, Blast_Score=193, Evalue=1e-49, Organism=Drosophila melanogaster, GI24657054, Length=287, Percent_Identity=40.418118466899, Blast_Score=192, Evalue=1e-49, Organism=Drosophila melanogaster, GI24663317, Length=292, Percent_Identity=38.013698630137, Blast_Score=190, Evalue=1e-48, Organism=Drosophila melanogaster, GI24662789, Length=296, Percent_Identity=34.7972972972973, Blast_Score=180, Evalue=8e-46, Organism=Drosophila melanogaster, GI20129731, Length=291, Percent_Identity=37.8006872852234, Blast_Score=180, Evalue=1e-45, Organism=Drosophila melanogaster, GI21356425, Length=298, Percent_Identity=36.9127516778523, Blast_Score=177, Evalue=9e-45, Organism=Drosophila melanogaster, GI45553081, Length=291, Percent_Identity=35.3951890034364, Blast_Score=176, Evalue=1e-44, Organism=Drosophila melanogaster, GI24662781, Length=295, Percent_Identity=37.6271186440678, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI24662785, Length=293, Percent_Identity=38.2252559726962, Blast_Score=159, Evalue=2e-39, Organism=Drosophila melanogaster, GI281366140, Length=256, Percent_Identity=34.765625, Blast_Score=149, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR018170 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: =1.1.1.274 [H]
Molecular weight: Translated: 31431; Mature: 31431
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00798 ALDOKETO_REDUCTASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSLMDQKNKLSKSEGIPLVTLNDGKTIPQLGFGVFKVDPDEAERVVTEALEVGYRHIDT CCHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCEEEEECHHHHHHHHHHHHHHHHHHHCE AAIYGNEEGVGRAIAKSGIPREELFITTKLWNDRHLDVEAAFEESLQKLGLDYVDLYLVH EEEECCCCCHHHHHHHCCCCHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEE WPAPKNDNYVAAWKGLEKLGDRARSIGVCNFLPEHLEKLLAEATTVPAINQIELHPALQQ CCCCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHH RDAVEASLAAGITVESWGPLGQGRFDLGAEEPIAAAAKNHGKTPAQVVIRWHLQNGFVVF HHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHEEEEEEECCCEEEE PKTVTKSRMAENIDVFDFELSDEEMAAITALERNDRGGSHPNDLN CCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MQSLMDQKNKLSKSEGIPLVTLNDGKTIPQLGFGVFKVDPDEAERVVTEALEVGYRHIDT CCHHHHHHHHHHHHCCCCEEEECCCCCCHHHCCEEEEECHHHHHHHHHHHHHHHHHHHCE AAIYGNEEGVGRAIAKSGIPREELFITTKLWNDRHLDVEAAFEESLQKLGLDYVDLYLVH EEEECCCCCHHHHHHHCCCCHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEE WPAPKNDNYVAAWKGLEKLGDRARSIGVCNFLPEHLEKLLAEATTVPAINQIELHPALQQ CCCCCCCCEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHH RDAVEASLAAGITVESWGPLGQGRFDLGAEEPIAAAAKNHGKTPAQVVIRWHLQNGFVVF HHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHEEEEEEECCCEEEE PKTVTKSRMAENIDVFDFELSDEEMAAITALERNDRGGSHPNDLN CCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3597405; 10737928; 9618487; 11399090 [H]