| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is treS [H]
Identifier: 145296258
GI number: 145296258
Start: 2399707
End: 2401560
Strand: Direct
Name: treS [H]
Synonym: cgR_2175
Alternate gene names: 145296258
Gene position: 2399707-2401560 (Clockwise)
Preceding gene: 145296257
Following gene: 145296259
Centisome position: 72.41
GC content: 54.53
Gene sequence:
>1854_bases GTGCTGCAAACCTCCTGGCATTTCTCTATCCTGGCAGGCATGACTGATACCTCTCCGTTGAATTCTCAGCCGAGTGCAGA TCACCACCCTGATCACGCGGCTCGCCCAGTTCTTGATGCCCACGGCTTAATCGTTGAGCACGAATCGGAAGAGTTTCCAG TCCCCGCACCCGCGCCCGGTGAACAGCCCTGGGAGAAGAAAAACCGCGAGTGGTACAAAGACGCCGTCTTCTACGAGGTG CTGGTGCGCGCCTTCTACGATCCAGAAGGCAACGGAGTCGGATCGCTGAAAGGTCTAACCGAAAAACTAGACTACATTCA GTGGCTCGGCGTGGATTGCATTTGGATCCCGCCGTTTTATGATTCCCCACTGCGCGACGGCGGCTACGATATCCGCAACT TCCGTGAAATCCTGCCCGAGTTCGGCACCGTCGATGATTTCGTAGAGCTCATCGACCACGCCCACCGCCGAGGCCTGCGC GTTATCACCGACCTGGTCATGAATCACACCTCCGACCAGCACGCATGGTTCCAAGAATCCCGGCGCGACCCAACCGGCCC CTACGGAGATTTCTATGTGTGGAGCGATGATCCCACCCTGTACAACGAAGCCCGCATCATCTTTGTAGATACAGAAGAAT CCAACTGGACCTATGATCCGGTGCGTGGCCAGTACTTCTGGCACCGCTTCTTCTCCCACCAACCAGACCTCAACTACGAC AACCCCGCAGTCCAAGAGGCCATGCTAGATGTCTTGCGTTTCTGGCTGGACCTGGGACTTGATGGTTTCCGACTAGATGC CGTTCCTTATCTTTTTGAACGCGAAGGCACCAACGGCGAAAACCTCAAAGAGACCCACGATTTCCTCAAATTGTGCCGCT CTGTCATTGAGAAGGAATACCCCGGCCGAATCCTGCTCGCAGAAGCCAACCAATGGCCCCAAGATGTGGTCGAATACTTC GGTGAAAAAGACAAAGGCGATGAATGCCACATGGCCTTCCACTTCCCTTTGATGCCGCGCATTTTCATGGGAGTTCGCCA AGGTTCACGCACCCCGATCAGTGAGATCCTGGCCAACACCCCGGAGATTCCCAAGACTGCCCAATGGGGTATTTTCCTGC GTAATCATGATGAGCTCACCCTTGAAATGGTCTCCGATGAGGAACGCAGCTACATGTACTCTCAGTTCGCCATGGAACCT CGTATGCGTGCCAACGTAGGAATCCGCAGGCGCCTTTCCCCACTGCTTGAAGGCGACCGCAACCAGCTGGAACTCCTTCA CGGTTTGTTGCTGTCTCTACCTGGCTCACCCGTGTTGTATTACGGTGATGAAATTGGCATGGGCGACAACATCTGGCTCC ACGACCGCGACGGAGTGCGCACCCCCATGCAGTGGTCCAACGACCGCAACGGTGGTTTCTCCAAAGCGGATCCTGAACGC CTGTACCTTCCAGCGATCCAAAATGATCAATACGGCTACGCCCAAGTAAACGTGGAAAGCCAACTCAACCGCGAAAACTC CCTGCTGCGCTGGCTCCGCAACCAAATCCTGATCCGCAAGCAGTACCGCGCATTTGGTGCCGGAACCTACCGTGAAGTGT CCTCCACCAATGAGTCAGTGTTAACATTTTTACGAGAACACAAGGGACAAACCATTTTGTGTGTCAACAACATGAGCAAA TACCCGCAGGCAGTCTCGCTTGATTTACGTGAATTTGCAGGACACACCCCTCGAGAGATGTCAGGCGGGCAGCTGTTCCC TACCATTGCTGAACGGGAGTGGATTGTCACTTTAGCCCCTCACGGATTCTTCTGGTTTGATCTCACCGCCGATGAAAAGG ACGATATGGAATGA
Upstream 100 bases:
>100_bases TCAATATTCCGAAGAAAACCGCGCAGCACTCTCACTGGTCTCCGGTGAGGCGAAGGTGGTGAAAGACCCACTACGCATGG TGCGCCTAGCTTTTTAGAAT
Downstream 100 bases:
>100_bases GCATTGGCCAACACATCATCACTGAGCGTTTCTACGGCGCCAAGTCCCACACCATCGACAACGTAGATATTGTATTGTCC CGCGAATGTGGCGAGAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: Maltose alpha-D-glucosyltransferase [H]
Number of amino acids: Translated: 617; Mature: 617
Protein sequence:
>617_residues MLQTSWHFSILAGMTDTSPLNSQPSADHHPDHAARPVLDAHGLIVEHESEEFPVPAPAPGEQPWEKKNREWYKDAVFYEV LVRAFYDPEGNGVGSLKGLTEKLDYIQWLGVDCIWIPPFYDSPLRDGGYDIRNFREILPEFGTVDDFVELIDHAHRRGLR VITDLVMNHTSDQHAWFQESRRDPTGPYGDFYVWSDDPTLYNEARIIFVDTEESNWTYDPVRGQYFWHRFFSHQPDLNYD NPAVQEAMLDVLRFWLDLGLDGFRLDAVPYLFEREGTNGENLKETHDFLKLCRSVIEKEYPGRILLAEANQWPQDVVEYF GEKDKGDECHMAFHFPLMPRIFMGVRQGSRTPISEILANTPEIPKTAQWGIFLRNHDELTLEMVSDEERSYMYSQFAMEP RMRANVGIRRRLSPLLEGDRNQLELLHGLLLSLPGSPVLYYGDEIGMGDNIWLHDRDGVRTPMQWSNDRNGGFSKADPER LYLPAIQNDQYGYAQVNVESQLNRENSLLRWLRNQILIRKQYRAFGAGTYREVSSTNESVLTFLREHKGQTILCVNNMSK YPQAVSLDLREFAGHTPREMSGGQLFPTIAEREWIVTLAPHGFFWFDLTADEKDDME
Sequences:
>Translated_617_residues MLQTSWHFSILAGMTDTSPLNSQPSADHHPDHAARPVLDAHGLIVEHESEEFPVPAPAPGEQPWEKKNREWYKDAVFYEV LVRAFYDPEGNGVGSLKGLTEKLDYIQWLGVDCIWIPPFYDSPLRDGGYDIRNFREILPEFGTVDDFVELIDHAHRRGLR VITDLVMNHTSDQHAWFQESRRDPTGPYGDFYVWSDDPTLYNEARIIFVDTEESNWTYDPVRGQYFWHRFFSHQPDLNYD NPAVQEAMLDVLRFWLDLGLDGFRLDAVPYLFEREGTNGENLKETHDFLKLCRSVIEKEYPGRILLAEANQWPQDVVEYF GEKDKGDECHMAFHFPLMPRIFMGVRQGSRTPISEILANTPEIPKTAQWGIFLRNHDELTLEMVSDEERSYMYSQFAMEP RMRANVGIRRRLSPLLEGDRNQLELLHGLLLSLPGSPVLYYGDEIGMGDNIWLHDRDGVRTPMQWSNDRNGGFSKADPER LYLPAIQNDQYGYAQVNVESQLNRENSLLRWLRNQILIRKQYRAFGAGTYREVSSTNESVLTFLREHKGQTILCVNNMSK YPQAVSLDLREFAGHTPREMSGGQLFPTIAEREWIVTLAPHGFFWFDLTADEKDDME >Mature_617_residues MLQTSWHFSILAGMTDTSPLNSQPSADHHPDHAARPVLDAHGLIVEHESEEFPVPAPAPGEQPWEKKNREWYKDAVFYEV LVRAFYDPEGNGVGSLKGLTEKLDYIQWLGVDCIWIPPFYDSPLRDGGYDIRNFREILPEFGTVDDFVELIDHAHRRGLR VITDLVMNHTSDQHAWFQESRRDPTGPYGDFYVWSDDPTLYNEARIIFVDTEESNWTYDPVRGQYFWHRFFSHQPDLNYD NPAVQEAMLDVLRFWLDLGLDGFRLDAVPYLFEREGTNGENLKETHDFLKLCRSVIEKEYPGRILLAEANQWPQDVVEYF GEKDKGDECHMAFHFPLMPRIFMGVRQGSRTPISEILANTPEIPKTAQWGIFLRNHDELTLEMVSDEERSYMYSQFAMEP RMRANVGIRRRLSPLLEGDRNQLELLHGLLLSLPGSPVLYYGDEIGMGDNIWLHDRDGVRTPMQWSNDRNGGFSKADPER LYLPAIQNDQYGYAQVNVESQLNRENSLLRWLRNQILIRKQYRAFGAGTYREVSSTNESVLTFLREHKGQTILCVNNMSK YPQAVSLDLREFAGHTPREMSGGQLFPTIAEREWIVTLAPHGFFWFDLTADEKDDME
Specific function: Catalyzes the conversion of maltose into alpha,alpha- trehalose by transglucosylation [H]
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=212, Percent_Identity=43.3962264150943, Blast_Score=188, Evalue=1e-47, Organism=Escherichia coli, GI1790687, Length=545, Percent_Identity=29.9082568807339, Blast_Score=223, Evalue=3e-59, Organism=Escherichia coli, GI87081873, Length=494, Percent_Identity=25.5060728744939, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1786604, Length=402, Percent_Identity=25.3731343283582, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI25147709, Length=474, Percent_Identity=25.3164556962025, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI32565753, Length=502, Percent_Identity=24.7011952191235, Blast_Score=106, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6321731, Length=577, Percent_Identity=27.209705372617, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6319776, Length=561, Percent_Identity=27.0944741532977, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6322245, Length=569, Percent_Identity=26.5377855887522, Blast_Score=188, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6321726, Length=204, Percent_Identity=40.6862745098039, Blast_Score=171, Evalue=5e-43, Organism=Saccharomyces cerevisiae, GI6322241, Length=207, Percent_Identity=40.5797101449275, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6322021, Length=207, Percent_Identity=40.5797101449275, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6324416, Length=207, Percent_Identity=40.5797101449275, Blast_Score=169, Evalue=1e-42, Organism=Drosophila melanogaster, GI24586597, Length=577, Percent_Identity=31.8890814558059, Blast_Score=235, Evalue=8e-62, Organism=Drosophila melanogaster, GI24586587, Length=528, Percent_Identity=32.1969696969697, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24583749, Length=571, Percent_Identity=31.3485113835377, Blast_Score=232, Evalue=7e-61, Organism=Drosophila melanogaster, GI24583747, Length=571, Percent_Identity=31.1733800350263, Blast_Score=231, Evalue=8e-61, Organism=Drosophila melanogaster, GI24586593, Length=568, Percent_Identity=30.4577464788732, Blast_Score=226, Evalue=3e-59, Organism=Drosophila melanogaster, GI24583745, Length=555, Percent_Identity=30.0900900900901, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24586599, Length=565, Percent_Identity=30.4424778761062, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI45549022, Length=551, Percent_Identity=28.4936479128857, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI221330053, Length=543, Percent_Identity=30.2025782688766, Blast_Score=214, Evalue=1e-55, Organism=Drosophila melanogaster, GI24586589, Length=559, Percent_Identity=30.4114490161002, Blast_Score=204, Evalue=2e-52, Organism=Drosophila melanogaster, GI24586591, Length=538, Percent_Identity=29.7397769516729, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI281360393, Length=514, Percent_Identity=29.3774319066148, Blast_Score=172, Evalue=6e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR012810 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.16 [H]
Molecular weight: Translated: 71597; Mature: 71597
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQTSWHFSILAGMTDTSPLNSQPSADHHPDHAARPVLDAHGLIVEHESEEFPVPAPAPG CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCC EQPWEKKNREWYKDAVFYEVLVRAFYDPEGNGVGSLKGLTEKLDYIQWLGVDCIWIPPFY CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCC DSPLRDGGYDIRNFREILPEFGTVDDFVELIDHAHRRGLRVITDLVMNHTSDQHAWFQES CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHH RRDPTGPYGDFYVWSDDPTLYNEARIIFVDTEESNWTYDPVRGQYFWHRFFSHQPDLNYD CCCCCCCCCCEEEECCCCCEECCEEEEEEECCCCCCEECCCCCHHHHHHHHCCCCCCCCC NPAVQEAMLDVLRFWLDLGLDGFRLDAVPYLFEREGTNGENLKETHDFLKLCRSVIEKEY CHHHHHHHHHHHHHHHHCCCCCEEECCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHCC PGRILLAEANQWPQDVVEYFGEKDKGDECHMAFHFPLMPRIFMGVRQGSRTPISEILANT CCEEEEECCCCCHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHCCC PEIPKTAQWGIFLRNHDELTLEMVSDEERSYMYSQFAMEPRMRANVGIRRRLSPLLEGDR CCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHCCCH NQLELLHGLLLSLPGSPVLYYGDEIGMGDNIWLHDRDGVRTPMQWSNDRNGGFSKADPER HHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCE LYLPAIQNDQYGYAQVNVESQLNRENSLLRWLRNQILIRKQYRAFGAGTYREVSSTNESV EEECCCCCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHH LTFLREHKGQTILCVNNMSKYPQAVSLDLREFAGHTPREMSGGQLFPTIAEREWIVTLAP HHHHHHCCCCEEEEECCCCCCCCHHHEEHHHHCCCCCCCCCCCEECCCCCCCCEEEEECC HGFFWFDLTADEKDDME CCEEEEEEECCCCCCCC >Mature Secondary Structure MLQTSWHFSILAGMTDTSPLNSQPSADHHPDHAARPVLDAHGLIVEHESEEFPVPAPAPG CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCC EQPWEKKNREWYKDAVFYEVLVRAFYDPEGNGVGSLKGLTEKLDYIQWLGVDCIWIPPFY CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCC DSPLRDGGYDIRNFREILPEFGTVDDFVELIDHAHRRGLRVITDLVMNHTSDQHAWFQES CCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHH RRDPTGPYGDFYVWSDDPTLYNEARIIFVDTEESNWTYDPVRGQYFWHRFFSHQPDLNYD CCCCCCCCCCEEEECCCCCEECCEEEEEEECCCCCCEECCCCCHHHHHHHHCCCCCCCCC NPAVQEAMLDVLRFWLDLGLDGFRLDAVPYLFEREGTNGENLKETHDFLKLCRSVIEKEY CHHHHHHHHHHHHHHHHCCCCCEEECCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHCC PGRILLAEANQWPQDVVEYFGEKDKGDECHMAFHFPLMPRIFMGVRQGSRTPISEILANT CCEEEEECCCCCHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCHHHHHCCC PEIPKTAQWGIFLRNHDELTLEMVSDEERSYMYSQFAMEPRMRANVGIRRRLSPLLEGDR CCCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHCCCH NQLELLHGLLLSLPGSPVLYYGDEIGMGDNIWLHDRDGVRTPMQWSNDRNGGFSKADPER HHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCE LYLPAIQNDQYGYAQVNVESQLNRENSLLRWLRNQILIRKQYRAFGAGTYREVSSTNESV EEECCCCCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHH LTFLREHKGQTILCVNNMSKYPQAVSLDLREFAGHTPREMSGGQLFPTIAEREWIVTLAP HHHHHHCCCCEEEEECCCCCCCCHHHEEHHHHCCCCCCCCCCCEECCCCCCCCEEEEECC HGFFWFDLTADEKDDME CCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8645698 [H]