| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is fur [H]
Identifier: 145296234
GI number: 145296234
Start: 2374644
End: 2375078
Strand: Direct
Name: fur [H]
Synonym: cgR_2151
Alternate gene names: 145296234
Gene position: 2374644-2375078 (Clockwise)
Preceding gene: 145296233
Following gene: 145296235
Centisome position: 71.65
GC content: 53.33
Gene sequence:
>435_bases GTGGGCATCAATCGCATCAGCCAAGGCTCTGCCCCGAAGCTGGGAGTGCGAAGCACCAGACAGCGAAAAGCCGTAATTGA CGTTCTTGAGGAAATCGATAACTTCGCTTCCGCCAAAGAAATCCATCACGAGCTATCCACCAGGGAACACAACGTCGGCC TCACAACCGTCTACCGAACCCTCCAACCCCTCGCCGACATCGGAGCAGTCGACGTACTTACCGTCACAGGTGGAGAAACT CTGTACCGCCAATGCCACGACGAGGGACACCACCATCACTTGGTCTGCACCAATTGCGGTCACACAGTCGAAATCGATGG CGGTCCAGTAGAGACATGGGCACAGGAAATTGCCACTAAAAACGGCTTTGCTCTCAGTAGTCACGAGGCCGAAATCTTTG GACTTTGCGCTGATTGTAAGGAAAAAGTTACGTAG
Upstream 100 bases:
>100_bases CCACTCGTCCTCGACATACTTCTCCTGGCACTAAACGCAGGGGTTGACACATCTGGGTAGACTATCGAAGTACATTTTGT GTCATTGAGGAGGATCAACG
Downstream 100 bases:
>100_bases TTCAAGGACATATGAAGCTGTCGAACATGTGAGTGCTCGACAGCTTTTCCATTTCGAAAAATAGCCTTGTATTCGAAAAT GTGATCGGGTAAGGTGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MGINRISQGSAPKLGVRSTRQRKAVIDVLEEIDNFASAKEIHHELSTREHNVGLTTVYRTLQPLADIGAVDVLTVTGGET LYRQCHDEGHHHHLVCTNCGHTVEIDGGPVETWAQEIATKNGFALSSHEAEIFGLCADCKEKVT
Sequences:
>Translated_144_residues MGINRISQGSAPKLGVRSTRQRKAVIDVLEEIDNFASAKEIHHELSTREHNVGLTTVYRTLQPLADIGAVDVLTVTGGET LYRQCHDEGHHHHLVCTNCGHTVEIDGGPVETWAQEIATKNGFALSSHEAEIFGLCADCKEKVT >Mature_143_residues GINRISQGSAPKLGVRSTRQRKAVIDVLEEIDNFASAKEIHHELSTREHNVGLTTVYRTLQPLADIGAVDVLTVTGGETL YRQCHDEGHHHHLVCTNCGHTVEIDGGPVETWAQEIATKNGFALSSHEAEIFGLCADCKEKVT
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates the expression of several outer-membrane proteins including the iron transport operon [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=135, Percent_Identity=34.0740740740741, Blast_Score=84, Evalue=5e-18,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 - InterPro: IPR011991 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 15740; Mature: 15609
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGINRISQGSAPKLGVRSTRQRKAVIDVLEEIDNFASAKEIHHELSTREHNVGLTTVYRT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LQPLADIGAVDVLTVTGGETLYRQCHDEGHHHHLVCTNCGHTVEIDGGPVETWAQEIATK HHHHHHCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCEEEECCCCHHHHHHHHHCC NGFALSSHEAEIFGLCADCKEKVT CCCEECCCCCHHHHHHHHHHHCCC >Mature Secondary Structure GINRISQGSAPKLGVRSTRQRKAVIDVLEEIDNFASAKEIHHELSTREHNVGLTTVYRT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH LQPLADIGAVDVLTVTGGETLYRQCHDEGHHHHLVCTNCGHTVEIDGGPVETWAQEIATK HHHHHHCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCEEEECCCCHHHHHHHHHCC NGFALSSHEAEIFGLCADCKEKVT CCCEECCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9055816 [H]