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The map label for this gene is nagD [H]

Identifier: 145296211

GI number: 145296211

Start: 2349026

End: 2349853

Strand: Direct

Name: nagD [H]

Synonym: cgR_2128

Alternate gene names: 145296211

Gene position: 2349026-2349853 (Clockwise)

Preceding gene: 145296210

Following gene: 145296212

Centisome position: 70.88

GC content: 53.5

Gene sequence:

>828_bases
ATGACAGTGAACATTTCATATCTGACCGACATGGACGGCGTCCTCATCAAAGAGGGCGAGATGATTCCGGGTGCAGATCG
TTTTCTTCAGTCTCTCACCGATAACAATGTGGAGTTTATGGTTTTGACCAACAACTCCATTTTCACCCCGAGGGATCTTT
CTGCACGTCTTAAGACTTCCGGTTTGGATATCCCGCCGGAGCGTATTTGGACTTCTGCAACCGCCACTGCTCACTTCCTG
AAATCCCAGGTCAAGGAGGGCACAGCCTATGTTGTTGGCGAGTCTGGTCTGACCACTGCGTTGCATACCGCGGGTTGGAT
TTTGACGGATGCAAATCCTGAGTTTGTTGTCCTGGGCGAAACCCGCACGTATTCCTTCGAGGCAATCACCACTGCTATAA
ATCTGATTTTGGGCGGCGCTCGCTTTATTTGCACCAACCCGGATGTAACAGGACCTTCACCAAGTGGCATTTTGCCTGCT
ACTGGCTCTGTCGCAGCGCTTATTACCGCAGCTACAGGCGCTGAGCCTTATTACATCGGTAAGCCAAACCCTGTGATGAT
GCGCAGTGCGCTGAACACCATCGGGGCGCATTCCGAGCACACTGTCATGATCGGCGACCGCATGGACACCGACGTGAAAT
CTGGTTTGGAAGCCGGCCTGAGCACCGTGCTGGTTCGAAGCGGAATTTCCGACGACGCCGAGATCCGCCGCTACCCCTTC
CGCCCAACTCACGTGATCAATTCCATCGCCGATCTTGCCGATTGCTGGGACGATCCTTTCGGTGACGGTGCATTTCACGT
ACCAGATGAGCAGCAGTTCACTGACTAG

Upstream 100 bases:

>100_bases
TGCCAAGGATTTGACCACCGTGCAGGATTTGATTGACTTTATTAACACCAATAAGGCTGATTAGCGGGAAAATTTCGCCC
AAAACAGGGACAATGGTGTT

Downstream 100 bases:

>100_bases
TATTCTGTAGGTCATGGCATTTGCAGACATTGTGCGCAGCGTCGAAAACCGCACCAACGCAGCGACCCTCAACTGGTCCA
TCAAAAAGGGCTGGAAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTVNISYLTDMDGVLIKEGEMIPGADRFLQSLTDNNVEFMVLTNNSIFTPRDLSARLKTSGLDIPPERIWTSATATAHFL
KSQVKEGTAYVVGESGLTTALHTAGWILTDANPEFVVLGETRTYSFEAITTAINLILGGARFICTNPDVTGPSPSGILPA
TGSVAALITAATGAEPYYIGKPNPVMMRSALNTIGAHSEHTVMIGDRMDTDVKSGLEAGLSTVLVRSGISDDAEIRRYPF
RPTHVINSIADLADCWDDPFGDGAFHVPDEQQFTD

Sequences:

>Translated_275_residues
MTVNISYLTDMDGVLIKEGEMIPGADRFLQSLTDNNVEFMVLTNNSIFTPRDLSARLKTSGLDIPPERIWTSATATAHFL
KSQVKEGTAYVVGESGLTTALHTAGWILTDANPEFVVLGETRTYSFEAITTAINLILGGARFICTNPDVTGPSPSGILPA
TGSVAALITAATGAEPYYIGKPNPVMMRSALNTIGAHSEHTVMIGDRMDTDVKSGLEAGLSTVLVRSGISDDAEIRRYPF
RPTHVINSIADLADCWDDPFGDGAFHVPDEQQFTD
>Mature_274_residues
TVNISYLTDMDGVLIKEGEMIPGADRFLQSLTDNNVEFMVLTNNSIFTPRDLSARLKTSGLDIPPERIWTSATATAHFLK
SQVKEGTAYVVGESGLTTALHTAGWILTDANPEFVVLGETRTYSFEAITTAINLILGGARFICTNPDVTGPSPSGILPAT
GSVAALITAATGAEPYYIGKPNPVMMRSALNTIGAHSEHTVMIGDRMDTDVKSGLEAGLSTVLVRSGISDDAEIRRYPFR
PTHVINSIADLADCWDDPFGDGAFHVPDEQQFTD

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10092677, Length=274, Percent_Identity=28.8321167883212, Blast_Score=98, Evalue=7e-21,
Organism=Homo sapiens, GI108796653, Length=286, Percent_Identity=25.5244755244755, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI14149777, Length=240, Percent_Identity=28.3333333333333, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI269847098, Length=215, Percent_Identity=23.7209302325581, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1786890, Length=253, Percent_Identity=43.8735177865613, Blast_Score=216, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17562458, Length=260, Percent_Identity=27.3076923076923, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17560956, Length=260, Percent_Identity=27.3076923076923, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17558880, Length=260, Percent_Identity=27.3076923076923, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI193210059, Length=261, Percent_Identity=27.9693486590038, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI86563050, Length=244, Percent_Identity=28.2786885245902, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71984613, Length=269, Percent_Identity=26.3940520446097, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17562356, Length=252, Percent_Identity=28.1746031746032, Blast_Score=71, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6319965, Length=236, Percent_Identity=27.1186440677966, Blast_Score=85, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24666141, Length=257, Percent_Identity=29.5719844357977, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24656326, Length=253, Percent_Identity=24.1106719367589, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24656330, Length=244, Percent_Identity=25.8196721311475, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 29541; Mature: 29409

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVNISYLTDMDGVLIKEGEMIPGADRFLQSLTDNNVEFMVLTNNSIFTPRDLSARLKTS
CEEEEEEECCCCCEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHCC
GLDIPPERIWTSATATAHFLKSQVKEGTAYVVGESGLTTALHTAGWILTDANPEFVVLGE
CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCEEEECCCCCEEEEEC
TRTYSFEAITTAINLILGGARFICTNPDVTGPSPSGILPATGSVAALITAATGAEPYYIG
CCEEEHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEC
KPNPVMMRSALNTIGAHSEHTVMIGDRMDTDVKSGLEAGLSTVLVRSGISDDAEIRRYPF
CCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC
RPTHVINSIADLADCWDDPFGDGAFHVPDEQQFTD
CHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure 
TVNISYLTDMDGVLIKEGEMIPGADRFLQSLTDNNVEFMVLTNNSIFTPRDLSARLKTS
EEEEEEECCCCCEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHCC
GLDIPPERIWTSATATAHFLKSQVKEGTAYVVGESGLTTALHTAGWILTDANPEFVVLGE
CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCEEEECCCCCEEEEEC
TRTYSFEAITTAINLILGGARFICTNPDVTGPSPSGILPATGSVAALITAATGAEPYYIG
CCEEEHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEC
KPNPVMMRSALNTIGAHSEHTVMIGDRMDTDVKSGLEAGLSTVLVRSGISDDAEIRRYPF
CCCHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCC
RPTHVINSIADLADCWDDPFGDGAFHVPDEQQFTD
CHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]