| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145296206
Identifier: 145296206
GI number: 145296206
Start: 2345502
End: 2346494
Strand: Reverse
Name: 145296206
Synonym: cgR_2123
Alternate gene names: NA
Gene position: 2346494-2345502 (Counterclockwise)
Preceding gene: 145296208
Following gene: 145296205
Centisome position: 70.8
GC content: 54.08
Gene sequence:
>993_bases ATGTTTTCTTCCCGTTCGAAGGTACTCGCAAGCATCTTTACTGTTGGCGCCTTGGCGTTGGCTTCGTGCTCAAGCGATTC CAGTGACAGCTCCACCTCCACTGATGCTGCAGGTGGCGACTCTTACCGAGTTGGCATCAACCAGCTTGTTCAGCACCCTG CACTTGATGCAGCGACCACTGGTTTCAAGGAAGCTTTTGAAGAGGCAGGCGTTGACGTCACCTTTGATGAGCAAAACGCT AACGGCGAGCAGGGCACTGCACTGACTATTTCTCAGCAGTTCGCTTCTGACAATTTGGATCTCGTGTTGGCTGTTGCAAC TCCAGCAGCACAGGCAACTGCGCAGAATATCACTGATATCCCAGTCCTGTTCACCGCAGTTACCGATGCAGTGTCGGCAG AGCTGGTGGATTCTAATGAAGCACCTGGCGGAAACGTCACCGGTACTTCTGATATCGCACCGATTGAGCAGCAGTTGGAG CTTTTGCAGCAGCTGGTTCCTGACGCAAAGTCCATCGGCATCGTCTACGCGTCTGGTGAGGTCAACTCTCAGGTGCAGGT CGATGAGGTCACCAAGGCTGCTGAGCCACTGGGGCTGTCCGTTAATACTCAGACTGTCACTACCGTGAACGAGATTCAGC AGGCTGTTGAAGCTCTCGGCGATGTTGATGTCATCTACGTTCCAACTGACAACATGGTTGTTTCCGGTATTTCTTCTCTG GTTCAGGTTGCTGAGCAGAAGCAGATCCCTGTGATCGGCGCTGAGTCCGGCACTGTTGAGGGTGGCGCACTGGCAACCCT GGGTATCGATTACACCGAGCTTGGCCGCCAGACTGGTGAGATGGCTCTGCGTATTCTGCAGGACGGCGAAGACCCAGCAA CCATGCCTGTGGAGACTGCAACTGAGTTCACCTACGTGATCAACGAAGATGCAGCAGAGCGCCAGGGCGTGGAGATCCCT CAAGAGATTTTGGATAAGGCCGAACGCGTATGA
Upstream 100 bases:
>100_bases TAGTTTAAATCATGAGACATTTCACATATGGTTCTTCATCCGAGACATGTGTTGACGCTGTCTGCCCCTTTTTGAAAATA ACACTTTAAGGAGATGTGCC
Downstream 100 bases:
>100_bases TCGGCGCTTTTGAGTTCGGATTGTTGTACGGAGTTGTCGCATTGGGCGTCTATTTGACGTTCCGTGTGCTCAACTTTCCC GACCTCACCGTTGACGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MFSSRSKVLASIFTVGALALASCSSDSSDSSTSTDAAGGDSYRVGINQLVQHPALDAATTGFKEAFEEAGVDVTFDEQNA NGEQGTALTISQQFASDNLDLVLAVATPAAQATAQNITDIPVLFTAVTDAVSAELVDSNEAPGGNVTGTSDIAPIEQQLE LLQQLVPDAKSIGIVYASGEVNSQVQVDEVTKAAEPLGLSVNTQTVTTVNEIQQAVEALGDVDVIYVPTDNMVVSGISSL VQVAEQKQIPVIGAESGTVEGGALATLGIDYTELGRQTGEMALRILQDGEDPATMPVETATEFTYVINEDAAERQGVEIP QEILDKAERV
Sequences:
>Translated_330_residues MFSSRSKVLASIFTVGALALASCSSDSSDSSTSTDAAGGDSYRVGINQLVQHPALDAATTGFKEAFEEAGVDVTFDEQNA NGEQGTALTISQQFASDNLDLVLAVATPAAQATAQNITDIPVLFTAVTDAVSAELVDSNEAPGGNVTGTSDIAPIEQQLE LLQQLVPDAKSIGIVYASGEVNSQVQVDEVTKAAEPLGLSVNTQTVTTVNEIQQAVEALGDVDVIYVPTDNMVVSGISSL VQVAEQKQIPVIGAESGTVEGGALATLGIDYTELGRQTGEMALRILQDGEDPATMPVETATEFTYVINEDAAERQGVEIP QEILDKAERV >Mature_330_residues MFSSRSKVLASIFTVGALALASCSSDSSDSSTSTDAAGGDSYRVGINQLVQHPALDAATTGFKEAFEEAGVDVTFDEQNA NGEQGTALTISQQFASDNLDLVLAVATPAAQATAQNITDIPVLFTAVTDAVSAELVDSNEAPGGNVTGTSDIAPIEQQLE LLQQLVPDAKSIGIVYASGEVNSQVQVDEVTKAAEPLGLSVNTQTVTTVNEIQQAVEALGDVDVIYVPTDNMVVSGISSL VQVAEQKQIPVIGAESGTVEGGALATLGIDYTELGRQTGEMALRILQDGEDPATMPVETATEFTYVINEDAAERQGVEIP QEILDKAERV
Specific function: Unknown
COG id: COG2984
COG function: function code R; ABC-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007487 [H]
Pfam domain/function: PF04392 ABC_sub_bind [H]
EC number: NA
Molecular weight: Translated: 34310; Mature: 34310
Theoretical pI: Translated: 3.57; Mature: 3.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSSRSKVLASIFTVGALALASCSSDSSDSSTSTDAAGGDSYRVGINQLVQHPALDAATT CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCHHHHH GFKEAFEEAGVDVTFDEQNANGEQGTALTISQQFASDNLDLVLAVATPAAQATAQNITDI HHHHHHHHCCCEEEECCCCCCCCCCCEEEEEHHHCCCCCCEEEEEECCHHHHHHCCCCCH PVLFTAVTDAVSAELVDSNEAPGGNVTGTSDIAPIEQQLELLQQLVPDAKSIGIVYASGE HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCEEEEECCC VNSQVQVDEVTKAAEPLGLSVNTQTVTTVNEIQQAVEALGDVDVIYVPTDNMVVSGISSL CCCCEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH VQVAEQKQIPVIGAESGTVEGGALATLGIDYTELGRQTGEMALRILQDGEDPATMPVETA HHHHHHCCCCEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC TEFTYVINEDAAERQGVEIPQEILDKAERV CEEEEEECCCHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure MFSSRSKVLASIFTVGALALASCSSDSSDSSTSTDAAGGDSYRVGINQLVQHPALDAATT CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCHHHHH GFKEAFEEAGVDVTFDEQNANGEQGTALTISQQFASDNLDLVLAVATPAAQATAQNITDI HHHHHHHHCCCEEEECCCCCCCCCCCEEEEEHHHCCCCCCEEEEEECCHHHHHHCCCCCH PVLFTAVTDAVSAELVDSNEAPGGNVTGTSDIAPIEQQLELLQQLVPDAKSIGIVYASGE HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHCEEEEECCC VNSQVQVDEVTKAAEPLGLSVNTQTVTTVNEIQQAVEALGDVDVIYVPTDNMVVSGISSL CCCCEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH VQVAEQKQIPVIGAESGTVEGGALATLGIDYTELGRQTGEMALRILQDGEDPATMPVETA HHHHHHCCCCEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC TEFTYVINEDAAERQGVEIPQEILDKAERV CEEEEEECCCHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]