| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is hmuO [H]
Identifier: 145296185
GI number: 145296185
Start: 2321207
End: 2321854
Strand: Reverse
Name: hmuO [H]
Synonym: cgR_2104
Alternate gene names: 145296185
Gene position: 2321854-2321207 (Counterclockwise)
Preceding gene: 145296186
Following gene: 145296184
Centisome position: 70.06
GC content: 52.31
Gene sequence:
>648_bases ATGACAAGCATTATTGCAAGCAACAGCGACCTATCGGAGGAGCTGCGCACCCACACTGCGCGGGCCCATGAAGAGGCCGA GCACTCAACGTTTATGAATGATCTGCTCATCGGGAAGCTCGATGCGCAGGCATTTATCAAGTTGCAGGAGCAATCATGGT TGTTCTACACCGCTTTGGAAGCTGCAGCTCGCGCATGTGCAGAGGATTCCCGTGCGACTGGTCTGCTGGACCCACGCCTC GAGCGCAAGGAAACGTTGGAAGCTGATCTGGATAAGCTGCACGAAAACACCACCTGGCGTGACAACGTCACGGCCACTGC AGCGACAGCGTCTTATGTGGAACGTCTTGAAAGCATCGAAGCGGCCAAGGATTTCCCTCGTTTGGTTGCTCATCACTATG TCCGCTACCTGGGTGATTTGTCCGGTGGGCAGGTTATTGCACGTCTGGTGAACAGGGAATATGGAGTTTCGGAAGAGGCG TTGAGCTTCTATCGCTTTGAAGATCTTGGCAAGCTCAAGCCGTACAAGGATAATTACCGTGCAGAGCTTGATGCTTTGGA ATTAACAGCAGAGGAGCGTGCTGCGTTGCTGGATGAAGCATCTGATGCGTTCAGGTTTAATCAGCAAGTTTTTCAGGCTC TTGCTTAA
Upstream 100 bases:
>100_bases AGGATTTCTCTGAGGAATCTAGACGCAGATTAACTTCCGCTTGGCAGCGACCGGGATAACACCGCGGTTGCGGCCACGCA GGCTCACAAAGGACACCACT
Downstream 100 bases:
>100_bases CCGAAGGTGAAGTCTTGGCGAAGAGTCGGGGAGTTCCCTGATCTTTGCCCCTAAGTGGTTTACGGGCTGGAAAATGGTAC GTAGTCTCGGGTGTAAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MTSIIASNSDLSEELRTHTARAHEEAEHSTFMNDLLIGKLDAQAFIKLQEQSWLFYTALEAAARACAEDSRATGLLDPRL ERKETLEADLDKLHENTTWRDNVTATAATASYVERLESIEAAKDFPRLVAHHYVRYLGDLSGGQVIARLVNREYGVSEEA LSFYRFEDLGKLKPYKDNYRAELDALELTAEERAALLDEASDAFRFNQQVFQALA
Sequences:
>Translated_215_residues MTSIIASNSDLSEELRTHTARAHEEAEHSTFMNDLLIGKLDAQAFIKLQEQSWLFYTALEAAARACAEDSRATGLLDPRL ERKETLEADLDKLHENTTWRDNVTATAATASYVERLESIEAAKDFPRLVAHHYVRYLGDLSGGQVIARLVNREYGVSEEA LSFYRFEDLGKLKPYKDNYRAELDALELTAEERAALLDEASDAFRFNQQVFQALA >Mature_214_residues TSIIASNSDLSEELRTHTARAHEEAEHSTFMNDLLIGKLDAQAFIKLQEQSWLFYTALEAAARACAEDSRATGLLDPRLE RKETLEADLDKLHENTTWRDNVTATAATASYVERLESIEAAKDFPRLVAHHYVRYLGDLSGGQVIARLVNREYGVSEEAL SFYRFEDLGKLKPYKDNYRAELDALELTAEERAALLDEASDAFRFNQQVFQALA
Specific function: Allows the bacteria to use the host heme as an iron source. Involved in the oxidation of heme and subsequent release of iron from the heme moiety [H]
COG id: COG5398
COG function: function code P; Heme oxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heme oxygenase family [H]
Homologues:
Organism=Homo sapiens, GI187761311, Length=210, Percent_Identity=34.2857142857143, Blast_Score=114, Evalue=5e-26, Organism=Homo sapiens, GI187761309, Length=210, Percent_Identity=34.2857142857143, Blast_Score=114, Evalue=5e-26, Organism=Homo sapiens, GI187761307, Length=210, Percent_Identity=34.2857142857143, Blast_Score=114, Evalue=5e-26, Organism=Homo sapiens, GI8051608, Length=210, Percent_Identity=34.2857142857143, Blast_Score=114, Evalue=5e-26, Organism=Homo sapiens, GI4504437, Length=209, Percent_Identity=33.9712918660287, Blast_Score=107, Evalue=7e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002051 - InterPro: IPR016053 - InterPro: IPR016084 - InterPro: IPR018207 [H]
Pfam domain/function: PF01126 Heme_oxygenase [H]
EC number: =1.14.99.3 [H]
Molecular weight: Translated: 24306; Mature: 24175
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00593 HEME_OXYGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSIIASNSDLSEELRTHTARAHEEAEHSTFMNDLLIGKLDAQAFIKLQEQSWLFYTALE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHH AAARACAEDSRATGLLDPRLERKETLEADLDKLHENTTWRDNVTATAATASYVERLESIE HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH AAKDFPRLVAHHYVRYLGDLSGGQVIARLVNREYGVSEEALSFYRFEDLGKLKPYKDNYR HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHH AELDALELTAEERAALLDEASDAFRFNQQVFQALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TSIIASNSDLSEELRTHTARAHEEAEHSTFMNDLLIGKLDAQAFIKLQEQSWLFYTALE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHH AAARACAEDSRATGLLDPRLERKETLEADLDKLHENTTWRDNVTATAATASYVERLESIE HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH AAKDFPRLVAHHYVRYLGDLSGGQVIARLVNREYGVSEEALSFYRFEDLGKLKPYKDNYR HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHH AELDALELTAEERAALLDEASDAFRFNQQVFQALA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9006041; 14602910 [H]