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The map label for this gene is garP [H]

Identifier: 145296182

GI number: 145296182

Start: 2318057

End: 2319283

Strand: Direct

Name: garP [H]

Synonym: cgR_2101

Alternate gene names: 145296182

Gene position: 2318057-2319283 (Clockwise)

Preceding gene: 145296181

Following gene: 145296183

Centisome position: 69.94

GC content: 53.71

Gene sequence:

>1227_bases
ATGGCAGCCATTACCAGCCGCACCAGCTTTGGTGTGGCTGGAGTGGAGGCCATTGATCGTTTTCAGGTAGACGCCACACG
CATTGCAGTATTCACTTCTGTTCAGGTTGGTGTGTACGCGTTTGCTCAGATTCCGATGGGCATTTTGATCGATAAGTTTG
GTCCTCGGAAGCTCCTTGCCATTGGTGCTTTGGTGATGGGTATCGGCCAGCTCATTTTGGGCTTTACGGATAGCTATTCC
ATCGCGATTATTGCCCGCGTGTTTATCGGCGCCGGCGATGCATCGATCTTCCTTTCGGTTATGCGCATCCTGCCGTTTTG
GTTCCCACTGAAGCACACCCCTATTTTCACGCAGTTAACTACCTGCCTTGGTCAGTTGGGCCAGTTCTTTTCTGCGGTGC
CTTTCATGGCGTTGTTGGGTGCGCAGGGTTGGACTGTGGCGTTTGTCAGCCTTGGTTCCGTGGTGGCACTCATTGCGATC
GCAGCGCTGGTGGCCGTTCGGGATACTCCAGATCCTCAGCCAAAACCTGTCGAATCAGCTCAGGAAGCAGATAAACCAAG
CCTGCGCGCGAGTTTGAAGTTGATTGTCCGCAATCCGATTACGTGGCAGGGTTTCTTCATTCACTACGTATTGATGGTGT
GGCAGACCGTGTTCTCCATGATGTGGGGCGTCCCGCTGATGACTTTGGGCATGGGACTGTCTGCAACGACGGCTGGTTTG
GTGTTGAGCATCAACACGCTGTGCATGGTGGTATCGGCGCCAATCATCGGAATAATTTCCGCACGCCTTGGGTATCGCCG
TGACGTGGTCGCCATTGCGCTGTCGTTTGTTCAGTCCGCAGTATGGCTGGTGTTCTTGGCCTCCGATGCACCTCGTGGAT
TGATGGCTATCATCTTGGTCAACATCGTCATGGGTCTGACTACTGCGGCTTCTGGTTATGGCTTTGACACCATTCGTGAG
CGCCTAGATCGCAAGATTTTGGCTGCGGGCACGGGACTGGCAAACATGGGTGGATTCTTGTCATCGATGGTTGCAGCGCA
GGTTATGGGGTTCCTTCTTGATCACAGCGCGCATGGTAGTACCTATACTTGGGTGGACTTCCGTTTTGGTTTCCTTGCGA
TTCTTGTCACATGGGCCGTCGGAGTCACGGGATTTGTTGTAGCCCGACTCAAGGGTGGGCCGGGCCGCAGATTACTCGCC
CAGATTAGGTCTACCAAGGACATTTAA

Upstream 100 bases:

>100_bases
TGTGAAGAACAATGATCAACGGCCTTCGCCAAGACCGCATCCCAGAGAGAAAGTAACTACCCGCGCCCTCATAGTTTGGG
CAGCAGCCTGTCTTGTGTAT

Downstream 100 bases:

>100_bases
AGATCGGGTAAAACCTGTGGGCGTTGAAAAGGTCAAGGTCTCTGCCAAGGCACTAGTTGTCTGGTTGACGGCAATGTGCG
TGTACATCGTGGCCATTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: D-galactarate permease [H]

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MAAITSRTSFGVAGVEAIDRFQVDATRIAVFTSVQVGVYAFAQIPMGILIDKFGPRKLLAIGALVMGIGQLILGFTDSYS
IAIIARVFIGAGDASIFLSVMRILPFWFPLKHTPIFTQLTTCLGQLGQFFSAVPFMALLGAQGWTVAFVSLGSVVALIAI
AALVAVRDTPDPQPKPVESAQEADKPSLRASLKLIVRNPITWQGFFIHYVLMVWQTVFSMMWGVPLMTLGMGLSATTAGL
VLSINTLCMVVSAPIIGIISARLGYRRDVVAIALSFVQSAVWLVFLASDAPRGLMAIILVNIVMGLTTAASGYGFDTIRE
RLDRKILAAGTGLANMGGFLSSMVAAQVMGFLLDHSAHGSTYTWVDFRFGFLAILVTWAVGVTGFVVARLKGGPGRRLLA
QIRSTKDI

Sequences:

>Translated_408_residues
MAAITSRTSFGVAGVEAIDRFQVDATRIAVFTSVQVGVYAFAQIPMGILIDKFGPRKLLAIGALVMGIGQLILGFTDSYS
IAIIARVFIGAGDASIFLSVMRILPFWFPLKHTPIFTQLTTCLGQLGQFFSAVPFMALLGAQGWTVAFVSLGSVVALIAI
AALVAVRDTPDPQPKPVESAQEADKPSLRASLKLIVRNPITWQGFFIHYVLMVWQTVFSMMWGVPLMTLGMGLSATTAGL
VLSINTLCMVVSAPIIGIISARLGYRRDVVAIALSFVQSAVWLVFLASDAPRGLMAIILVNIVMGLTTAASGYGFDTIRE
RLDRKILAAGTGLANMGGFLSSMVAAQVMGFLLDHSAHGSTYTWVDFRFGFLAILVTWAVGVTGFVVARLKGGPGRRLLA
QIRSTKDI
>Mature_407_residues
AAITSRTSFGVAGVEAIDRFQVDATRIAVFTSVQVGVYAFAQIPMGILIDKFGPRKLLAIGALVMGIGQLILGFTDSYSI
AIIARVFIGAGDASIFLSVMRILPFWFPLKHTPIFTQLTTCLGQLGQFFSAVPFMALLGAQGWTVAFVSLGSVVALIAIA
ALVAVRDTPDPQPKPVESAQEADKPSLRASLKLIVRNPITWQGFFIHYVLMVWQTVFSMMWGVPLMTLGMGLSATTAGLV
LSINTLCMVVSAPIIGIISARLGYRRDVVAIALSFVQSAVWLVFLASDAPRGLMAIILVNIVMGLTTAASGYGFDTIRER
LDRKILAAGTGLANMGGFLSSMVAAQVMGFLLDHSAHGSTYTWVDFRFGFLAILVTWAVGVTGFVVARLKGGPGRRLLAQ
IRSTKDI

Specific function: Uptake of D-galactarate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI1789515, Length=397, Percent_Identity=25.6926952141058, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI2367379, Length=367, Percent_Identity=20.9809264305177, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43657; Mature: 43526

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAITSRTSFGVAGVEAIDRFQVDATRIAVFTSVQVGVYAFAQIPMGILIDKFGPRKLLA
CCCCCCCCCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHH
IGALVMGIGQLILGFTDSYSIAIIARVFIGAGDASIFLSVMRILPFWFPLKHTPIFTQLT
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
TCLGQLGQFFSAVPFMALLGAQGWTVAFVSLGSVVALIAIAALVAVRDTPDPQPKPVESA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
QEADKPSLRASLKLIVRNPITWQGFFIHYVLMVWQTVFSMMWGVPLMTLGMGLSATTAGL
HHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHH
VLSINTLCMVVSAPIIGIISARLGYRRDVVAIALSFVQSAVWLVFLASDAPRGLMAIILV
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
NIVMGLTTAASGYGFDTIRERLDRKILAAGTGLANMGGFLSSMVAAQVMGFLLDHSAHGS
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TYTWVDFRFGFLAILVTWAVGVTGFVVARLKGGPGRRLLAQIRSTKDI
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
AAITSRTSFGVAGVEAIDRFQVDATRIAVFTSVQVGVYAFAQIPMGILIDKFGPRKLLA
CCCCCCCCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHH
IGALVMGIGQLILGFTDSYSIAIIARVFIGAGDASIFLSVMRILPFWFPLKHTPIFTQLT
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
TCLGQLGQFFSAVPFMALLGAQGWTVAFVSLGSVVALIAIAALVAVRDTPDPQPKPVESA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
QEADKPSLRASLKLIVRNPITWQGFFIHYVLMVWQTVFSMMWGVPLMTLGMGLSATTAGL
HHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHH
VLSINTLCMVVSAPIIGIISARLGYRRDVVAIALSFVQSAVWLVFLASDAPRGLMAIILV
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
NIVMGLTTAASGYGFDTIRERLDRKILAAGTGLANMGGFLSSMVAAQVMGFLLDHSAHGS
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TYTWVDFRFGFLAILVTWAVGVTGFVVARLKGGPGRRLLAQIRSTKDI
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]