| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is thrC [H]
Identifier: 145296180
GI number: 145296180
Start: 2316034
End: 2317479
Strand: Reverse
Name: thrC [H]
Synonym: cgR_2099
Alternate gene names: 145296180
Gene position: 2317479-2316034 (Counterclockwise)
Preceding gene: 145296184
Following gene: 145296176
Centisome position: 69.93
GC content: 56.15
Gene sequence:
>1446_bases GTGGACTACATTTCGACGCGTGATGCCAGCCGTACCCCTGCCCGCTTCAGTGATATTTTGCTGGGCGGTCTAGCACCAGA CGGCGGCCTATACCTGCCTGCAACCTACCCTCAACTAGATGATGCCCAGCTGAGTAAATGGCGTGAGGTATTAGCCAACG AAGGATACGCAGCTTTGGCTGCTGAAGTTATCTCCCTGTTTGTTGATGACATCCCAGTAGAAGACATCAAGGCGATCACC GCACGCGCCTACACCTACCCGAAGTTCAACAGCGAAGACATCGTTCCTGTCACCGAACTCGAGGACAACATTTACCTGGG CCACCTTTCCGAAGGCCCAACCGCTGCATTCAAAGACATGGCCATGCAGCTGCTCGGCGAACTTTTCGAATACGAGCTTC GCCGCCGCAACGAAACCATCAACATCCTAGGCGCTACCTCTGGCGATACCGGCTCCTCTGCGGAATACGCCATGCGCGGC CGCGAGGGAATCCGCGTATTCATGCTGACCCCAGCTGGCCGCATGACCCCATTCCAGCAAGCACAGATGTTTGGCCTTGA CGATCCAAACATCTTCAACATCGCCCTCGACGGCGTTTTCGACGATTGCCAAGACGTAGTCAAGGCTGTCTCCGCCGACG CGGAATTTAAAAAAGACAACCGCATCGGTGCCGTGAACTCCATCAACTGGGCTCGCCTCATGGCACAGGTTGTGTACTAC GTTTCCTCATGGATCCGCACCACAACCAGCAATGACCAAAAGGTCAGCTTCTCCGTACCAACCGGCAACTTCGGTGACAT TTGCGCAGGCCACATCGCCCGCCAAATGGGACTTCCCATCGATCGCCTCATCGTGGCCACCAACGAAAACGATGTGCTCG ACGAGTTCTTCCGTACCGGCGACTACCGAGTCCGCAGCTCCGCAGACACCCACGAGACCTCCTCACCTTCGATGGATATC TCCCGCGCCTCCAACTTCGAGCGTTTCATCTTCGACCTGCTCGGCCGCGACGCCACCCGCGTCAACGATCTATTTGGTAC CCAGGTTCGCCAAGGCGGATTCTCACTGGCTGATGACGCCAACTTTGAAAAGGCTGCAGCAGAATACGGTTTCGCCTCCG GACGATCCACCCATGCTGACCGTGTGGCAACCATCGCTGACGTGCATTCCCGCCTCGACGTACTAATCGATCCCCACACC GCCGACGGCGTTCACGTGGCACGCCAGTGGAGGGACGAGGTCAACACCCCAATCATCGTCCTAGAAACTGCACTCCCAGT GAAATTTGCCGACACCATCGTCGAAGCAATTGGTGAAGCACCTCAAACTCCAGAGCGTTTCGCCGCGATCATGGATGCTC CATTCAAGGTTTCCGACCTACCAAACGACACCGATGCAGTTAAGCAGTACATCGTCGATGCGATTGCAAGCACTTCCGTG AAGTAA
Upstream 100 bases:
>100_bases GCAACACTTTAGGGTATCGCGTGGGCGAAGTCACCTTTTTCAACATATTTGAGACGGTGTGGGGGAGTATTGTGTCACCC CTTGGGATAGGGTTATATCC
Downstream 100 bases:
>100_bases CTTGCTTTACGCCAAGGCCTGATTCCTCTCTTTATGGGATGGAACCAGGCCTTTCGCATTGAGTGGCGTTTTAAGGCCCC CAATTCTTAGAACGGGTATT
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MDYISTRDASRTPARFSDILLGGLAPDGGLYLPATYPQLDDAQLSKWREVLANEGYAALAAEVISLFVDDIPVEDIKAIT ARAYTYPKFNSEDIVPVTELEDNIYLGHLSEGPTAAFKDMAMQLLGELFEYELRRRNETINILGATSGDTGSSAEYAMRG REGIRVFMLTPAGRMTPFQQAQMFGLDDPNIFNIALDGVFDDCQDVVKAVSADAEFKKDNRIGAVNSINWARLMAQVVYY VSSWIRTTTSNDQKVSFSVPTGNFGDICAGHIARQMGLPIDRLIVATNENDVLDEFFRTGDYRVRSSADTHETSSPSMDI SRASNFERFIFDLLGRDATRVNDLFGTQVRQGGFSLADDANFEKAAAEYGFASGRSTHADRVATIADVHSRLDVLIDPHT ADGVHVARQWRDEVNTPIIVLETALPVKFADTIVEAIGEAPQTPERFAAIMDAPFKVSDLPNDTDAVKQYIVDAIASTSV K
Sequences:
>Translated_481_residues MDYISTRDASRTPARFSDILLGGLAPDGGLYLPATYPQLDDAQLSKWREVLANEGYAALAAEVISLFVDDIPVEDIKAIT ARAYTYPKFNSEDIVPVTELEDNIYLGHLSEGPTAAFKDMAMQLLGELFEYELRRRNETINILGATSGDTGSSAEYAMRG REGIRVFMLTPAGRMTPFQQAQMFGLDDPNIFNIALDGVFDDCQDVVKAVSADAEFKKDNRIGAVNSINWARLMAQVVYY VSSWIRTTTSNDQKVSFSVPTGNFGDICAGHIARQMGLPIDRLIVATNENDVLDEFFRTGDYRVRSSADTHETSSPSMDI SRASNFERFIFDLLGRDATRVNDLFGTQVRQGGFSLADDANFEKAAAEYGFASGRSTHADRVATIADVHSRLDVLIDPHT ADGVHVARQWRDEVNTPIIVLETALPVKFADTIVEAIGEAPQTPERFAAIMDAPFKVSDLPNDTDAVKQYIVDAIASTSV K >Mature_481_residues MDYISTRDASRTPARFSDILLGGLAPDGGLYLPATYPQLDDAQLSKWREVLANEGYAALAAEVISLFVDDIPVEDIKAIT ARAYTYPKFNSEDIVPVTELEDNIYLGHLSEGPTAAFKDMAMQLLGELFEYELRRRNETINILGATSGDTGSSAEYAMRG REGIRVFMLTPAGRMTPFQQAQMFGLDDPNIFNIALDGVFDDCQDVVKAVSADAEFKKDNRIGAVNSINWARLMAQVVYY VSSWIRTTTSNDQKVSFSVPTGNFGDICAGHIARQMGLPIDRLIVATNENDVLDEFFRTGDYRVRSSADTHETSSPSMDI SRASNFERFIFDLLGRDATRVNDLFGTQVRQGGFSLADDANFEKAAAEYGFASGRSTHADRVATIADVHSRLDVLIDPHT ADGVHVARQWRDEVNTPIIVLETALPVKFADTIVEAIGEAPQTPERFAAIMDAPFKVSDLPNDTDAVKQYIVDAIASTSV K
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Homo sapiens, GI149193323, Length=458, Percent_Identity=29.4759825327511, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI153792148, Length=460, Percent_Identity=31.5217391304348, Blast_Score=207, Evalue=2e-53, Organism=Escherichia coli, GI1786185, Length=464, Percent_Identity=28.8793103448276, Blast_Score=183, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6319901, Length=467, Percent_Identity=39.6145610278373, Blast_Score=316, Evalue=4e-87,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 52905; Mature: 52905
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYISTRDASRTPARFSDILLGGLAPDGGLYLPATYPQLDDAQLSKWREVLANEGYAALA CCCCCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCHHHHH AEVISLFVDDIPVEDIKAITARAYTYPKFNSEDIVPVTELEDNIYLGHLSEGPTAAFKDM HHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCCCCEECCCCEEEEECCCCCHHHHHHH AMQLLGELFEYELRRRNETINILGATSGDTGSSAEYAMRGREGIRVFMLTPAGRMTPFQQ HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCHHH AQMFGLDDPNIFNIALDGVFDDCQDVVKAVSADAEFKKDNRIGAVNSINWARLMAQVVYY HHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHH VSSWIRTTTSNDQKVSFSVPTGNFGDICAGHIARQMGLPIDRLIVATNENDVLDEFFRTG HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHCC DYRVRSSADTHETSSPSMDISRASNFERFIFDLLGRDATRVNDLFGTQVRQGGFSLADDA CEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC NFEKAAAEYGFASGRSTHADRVATIADVHSRLDVLIDPHTADGVHVARQWRDEVNTPIIV CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHCCCCEEE LETALPVKFADTIVEAIGEAPQTPERFAAIMDAPFKVSDLPNDTDAVKQYIVDAIASTSV EECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCC K C >Mature Secondary Structure MDYISTRDASRTPARFSDILLGGLAPDGGLYLPATYPQLDDAQLSKWREVLANEGYAALA CCCCCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHCCCHHHHH AEVISLFVDDIPVEDIKAITARAYTYPKFNSEDIVPVTELEDNIYLGHLSEGPTAAFKDM HHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCCCCEECCCCEEEEECCCCCHHHHHHH AMQLLGELFEYELRRRNETINILGATSGDTGSSAEYAMRGREGIRVFMLTPAGRMTPFQQ HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHCCCCCCEEEEECCCCCCCCHHH AQMFGLDDPNIFNIALDGVFDDCQDVVKAVSADAEFKKDNRIGAVNSINWARLMAQVVYY HHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHHHH VSSWIRTTTSNDQKVSFSVPTGNFGDICAGHIARQMGLPIDRLIVATNENDVLDEFFRTG HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHEEEECCCCHHHHHHHHCC DYRVRSSADTHETSSPSMDISRASNFERFIFDLLGRDATRVNDLFGTQVRQGGFSLADDA CEEEECCCCCCCCCCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC NFEKAAAEYGFASGRSTHADRVATIADVHSRLDVLIDPHTADGVHVARQWRDEVNTPIIV CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHCCCCEEE LETALPVKFADTIVEAIGEAPQTPERFAAIMDAPFKVSDLPNDTDAVKQYIVDAIASTSV EECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHCCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2127631; 12948626 [H]