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The map label for this gene is tdcF [C]

Identifier: 145296179

GI number: 145296179

Start: 2315200

End: 2315595

Strand: Direct

Name: tdcF [C]

Synonym: cgR_2098

Alternate gene names: 145296179

Gene position: 2315200-2315595 (Clockwise)

Preceding gene: 145296178

Following gene: 145296181

Centisome position: 69.86

GC content: 54.04

Gene sequence:

>396_bases
ATGCCTGTTCCGGCGCTTCCGTTCGGGGAAACAGCTATGGTTGGCCACATGTCGAATGATCACCCATACTCCCCCGCAAA
ACGCGTCGGAAATTTCATCTTCGTCTCCGGCGCTCTTTCAGTAGACAAGGACTACCAACCAGTCGTCGGTCGTAAAGAAG
CAGTTGATGCAGCACTTGAACGCATGCGTGAACGCCTCGCCACCGCTGGTGGTGAACTCAAAGACGTTGTGAAACTCACT
TACTTTGTCACCGACATCAGCCTGCGCGAAGAATGCAACGAGCAATTCCGAGAGCATTTCCTCGAAGGCCGCCCGGCACG
CTCTTTCGTGGGTGCTTCGGATCTTCCCTATGGCGCAACTGTGGAAATTGATGCGATTGCGATGATCGAGGACTAG

Upstream 100 bases:

>100_bases
TCGGAACTTGGCATCGACCACGTCATCTTCAACATCCAGCGCCGACCAGCAAGCGAAGTACTGACCCAGATTTACGAAGA
AGTGCTCCCCCACCTCTAAA

Downstream 100 bases:

>100_bases
CCGGGGCATTTTCGCACGACGCTGGCCGGGGAATCATATATTCAGGGGTCGCAGCCACTTCTATTTGGCGCGATCTGTGT
CGTCCAAGGGGCTCGCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MPVPALPFGETAMVGHMSNDHPYSPAKRVGNFIFVSGALSVDKDYQPVVGRKEAVDAALERMRERLATAGGELKDVVKLT
YFVTDISLREECNEQFREHFLEGRPARSFVGASDLPYGATVEIDAIAMIED

Sequences:

>Translated_131_residues
MPVPALPFGETAMVGHMSNDHPYSPAKRVGNFIFVSGALSVDKDYQPVVGRKEAVDAALERMRERLATAGGELKDVVKLT
YFVTDISLREECNEQFREHFLEGRPARSFVGASDLPYGATVEIDAIAMIED
>Mature_130_residues
PVPALPFGETAMVGHMSNDHPYSPAKRVGNFIFVSGALSVDKDYQPVVGRKEAVDAALERMRERLATAGGELKDVVKLTY
FVTDISLREECNEQFREHFLEGRPARSFVGASDLPYGATVEIDAIAMIED

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=109, Percent_Identity=34.8623853211009, Blast_Score=64, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322138, Length=107, Percent_Identity=32.7102803738318, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14433; Mature: 14301

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVPALPFGETAMVGHMSNDHPYSPAKRVGNFIFVSGALSVDKDYQPVVGRKEAVDAALE
CCCCCCCCCCCEEEECCCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH
RMRERLATAGGELKDVVKLTYFVTDISLREECNEQFREHFLEGRPARSFVGASDLPYGAT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCE
VEIDAIAMIED
EEEEEEEEECC
>Mature Secondary Structure 
PVPALPFGETAMVGHMSNDHPYSPAKRVGNFIFVSGALSVDKDYQPVVGRKEAVDAALE
CCCCCCCCCCEEEECCCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH
RMRERLATAGGELKDVVKLTYFVTDISLREECNEQFREHFLEGRPARSFVGASDLPYGAT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCE
VEIDAIAMIED
EEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]