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The map label for this gene is qcrC [H]

Identifier: 145296153

GI number: 145296153

Start: 2288318

End: 2289205

Strand: Reverse

Name: qcrC [H]

Synonym: cgR_2073

Alternate gene names: 145296153

Gene position: 2289205-2288318 (Counterclockwise)

Preceding gene: 145296154

Following gene: 145296152

Centisome position: 69.07

GC content: 57.32

Gene sequence:

>888_bases
ATGGAAACCAACCCGCAGACCCCAGAGGGAAATAGCATGGCTAAACCCTCTGCTAAGAAGGTCAAGAATCGCCGCAAGGT
CCGGCGCACCATCGCAGGTGCATTGGCTCTGACCATTGGACTGAGCGGAGCAGGAATCCTAGCAACCGCGATCACTCCAG
ATGCTCAAGTTGCTACCGCTCAGCGTGACGATCAGGCCCTTATCTCCGAGGGTAAAGACCTCTACGATGTCGCCTGCATT
ACCTGCCACGGCGTAAACCTCCAAGGTGTTGAGGACCGCGGTCCTTCCCTCGTAGGTGTTGGCGAAGGCGCAGTGTACTT
CCAAGTTCACTCCGGCCGTATGCCAATGCTGCGTAACGAGGCTCAGGCTGAGCGTAAGGCTCCTCGTTACACCGAGGCGC
AGACCCTTGCGATCGCTGCATATGTTGCAGCTAACGGCGGTGGCCCAGGACTCGTTTACAACGAGGACGGCACCCTGGCC
ATGGAGGAGCTCCGTGGCGAAAACTACGACGGACAGATTACCTCCGCCGACGTCGCTCGCGGCGGAGATCTGTTCCGCCT
GAACTGTGCATCCTGCCACAACTTCACCGGTCGTGGTGGCGCACTGTCCTCTGGTAAGTACGCACCAAACCTGGATGCTG
CAAACGAGCAGGAAATCTACCAGGCTATGCTTACCGGTCCTCAGAACATGCCTAAGTTCTCCGATCGTCAGCTCTCCGCA
GATGAGAAGAAGGACATCATCGCCTTCATCAAGTCCACCAAAGAGACCCCATCACCTGGTGGTTACTCACTCGGTGGCTT
GGGCCCAGTGGCTGAGGGTCTGTTCATGTGGGTATTCGGCATTTTGGTCCTCGTGGCCGCCGCTATGTGGATTGGATCAC
GTTCATGA

Upstream 100 bases:

>100_bases
TCATCACTATTTACTTCATTCAGTAGGCAGTAAGGAATCCTCAACGTTGTTGAGGTTCCCTATGCCCTTCACTTCCACAG
TCGAGATTCAAAGGGAAATG

Downstream 100 bases:

>100_bases
GTAACAACAACAACAAGCAGTACACAACCCAAGAACTCAACGCGATGAGCAATGAGGATCTTGCACGACTTGGTACAGAG
CTGGACGACGTTACCATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome bc1 complex cytochrome c subunit [H]

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
METNPQTPEGNSMAKPSAKKVKNRRKVRRTIAGALALTIGLSGAGILATAITPDAQVATAQRDDQALISEGKDLYDVACI
TCHGVNLQGVEDRGPSLVGVGEGAVYFQVHSGRMPMLRNEAQAERKAPRYTEAQTLAIAAYVAANGGGPGLVYNEDGTLA
MEELRGENYDGQITSADVARGGDLFRLNCASCHNFTGRGGALSSGKYAPNLDAANEQEIYQAMLTGPQNMPKFSDRQLSA
DEKKDIIAFIKSTKETPSPGGYSLGGLGPVAEGLFMWVFGILVLVAAAMWIGSRS

Sequences:

>Translated_295_residues
METNPQTPEGNSMAKPSAKKVKNRRKVRRTIAGALALTIGLSGAGILATAITPDAQVATAQRDDQALISEGKDLYDVACI
TCHGVNLQGVEDRGPSLVGVGEGAVYFQVHSGRMPMLRNEAQAERKAPRYTEAQTLAIAAYVAANGGGPGLVYNEDGTLA
MEELRGENYDGQITSADVARGGDLFRLNCASCHNFTGRGGALSSGKYAPNLDAANEQEIYQAMLTGPQNMPKFSDRQLSA
DEKKDIIAFIKSTKETPSPGGYSLGGLGPVAEGLFMWVFGILVLVAAAMWIGSRS
>Mature_295_residues
METNPQTPEGNSMAKPSAKKVKNRRKVRRTIAGALALTIGLSGAGILATAITPDAQVATAQRDDQALISEGKDLYDVACI
TCHGVNLQGVEDRGPSLVGVGEGAVYFQVHSGRMPMLRNEAQAERKAPRYTEAQTLAIAAYVAANGGGPGLVYNEDGTLA
MEELRGENYDGQITSADVARGGDLFRLNCASCHNFTGRGGALSSGKYAPNLDAANEQEIYQAMLTGPQNMPKFSDRQLSA
DEKKDIIAFIKSTKETPSPGGYSLGGLGPVAEGLFMWVFGILVLVAAAMWIGSRS

Specific function: Component of the menaquinol-cytochrome c reductase complex [H]

COG id: COG2010

COG function: function code C; Cytochrome c, mono- and diheme variants

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 cytochrome c domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR009152 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 31156; Mature: 31156

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METNPQTPEGNSMAKPSAKKVKNRRKVRRTIAGALALTIGLSGAGILATAITPDAQVATA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEECC
QRDDQALISEGKDLYDVACITCHGVNLQGVEDRGPSLVGVGEGAVYFQVHSGRMPMLRNE
CCCCHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCEEEEEEECCCCCHHHCH
AQAERKAPRYTEAQTLAIAAYVAANGGGPGLVYNEDGTLAMEELRGENYDGQITSADVAR
HHHHHCCCCCCCHHHEEEEEEEEECCCCCCEEECCCCCEEHHHHCCCCCCCCEEEHHHHC
GGDLFRLNCASCHNFTGRGGALSSGKYAPNLDAANEQEIYQAMLTGPQNMPKFSDRQLSA
CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
DEKKDIIAFIKSTKETPSPGGYSLGGLGPVAEGLFMWVFGILVLVAAAMWIGSRS
CHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
METNPQTPEGNSMAKPSAKKVKNRRKVRRTIAGALALTIGLSGAGILATAITPDAQVATA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEECC
QRDDQALISEGKDLYDVACITCHGVNLQGVEDRGPSLVGVGEGAVYFQVHSGRMPMLRNE
CCCCHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCEEEEEEECCCCCHHHCH
AQAERKAPRYTEAQTLAIAAYVAANGGGPGLVYNEDGTLAMEELRGENYDGQITSADVAR
HHHHHCCCCCCCHHHEEEEEEEEECCCCCCEEECCCCCEEHHHHCCCCCCCCEEEHHHHC
GGDLFRLNCASCHNFTGRGGALSSGKYAPNLDAANEQEIYQAMLTGPQNMPKFSDRQLSA
CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
DEKKDIIAFIKSTKETPSPGGYSLGGLGPVAEGLFMWVFGILVLVAAAMWIGSRS
CHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12840036 [H]