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The map label for this gene is qcrB

Identifier: 145296151

GI number: 145296151

Start: 2285479

End: 2287098

Strand: Reverse

Name: qcrB

Synonym: cgR_2071

Alternate gene names: 145296151

Gene position: 2287098-2285479 (Counterclockwise)

Preceding gene: 145296152

Following gene: 145296150

Centisome position: 69.01

GC content: 53.52

Gene sequence:

>1620_bases
ATGAGTCTAGCTACCGTGGGAAACAATCTTGATTCCCGTTACACCATGGCGTCGGGTATCCGTCGCCAGATCAACAAGGT
CTTCCCAACTCACTGGTCCTTCATGCTCGGCGAGATTGCGCTTTACAGCTTCATCGTCTTGCTGCTGACTGGTGTCTACC
TGACCCTGTTCTTCGACCCATCAATCACTAAGGTCATTTATGACGGCGGCTACCTCCCACTGAACGGTGTGGAGATGTCC
CGTGCATACGCAACTGCGTTGGATATTTCCTTCGAAGTTCGCGGTGGTCTGTTCATCCGCCAGATGCACCACTGGGCAGC
CCTGCTGTTCGTTGTGTCCATGCTGGTTCATATGCTTCGTATTTTCTTCACCGGTGCGTTCCGTCGCCCACGTGAAGCAA
ACTGGATCATCGGTGTTGTTCTGATCATCTTGGGTATGGCTGAAGGCTTCATGGGTTACTCCCTGCCTGATGACCTGCTC
TCTGGTGTTGGTCTTCGAATCATGTCCGCCATCATCGTTGGTCTTCCGATCATCGGTACCTGGATGCACTGGCTGATCTT
CGGTGGAGACTTCCCATCCGATCTGATGCTGGACCGCTTCTACATCGCACACGTTCTAATCATCCCAGCTATCCTGCTTG
GCTTGATCGCAGCTCACCTGGCACTTGTTTGGTACCAGAAGCACACCCAGTTCCCAGGCGCTGGCCGCACTGAGAACAAC
GTGATCGGTATCCGAATCATGCCTCTGTTCGCAGTTAAGGCTGTTGCTTTCGGCCTCATCGTCTTCGGCTTCCTCGCACT
GCTTGCTGGTGTCACCACCATTAACGCAATTTGGAATCTTGGACCGTACAACCCTTCACAGGTGTCTGCTGGTTCCCAGC
CTGACGTTTACATGCTGTGGACAGATGGTGCTGCTCGTGTCATGCCGGCATGGGAGCTCTACCTCGGTAACTACACCATC
CCAGCAGTCTTCTGGGTTGCTGTGATGCTGGGTATCCTCGTGGTTCTGCTTGTGACTTACCCATTCATTGAGCGTAAGTT
CACTGGCGACGATGCACACCACAACTTGCTGCAGCGTCCTCGCGATGTTCCAGTCCGCACCTCACTCGGTGTCATGGCGC
TTGTCTTCTACATCCTGCTTACCGTTTCTGGTGGTAACGATGTTTACGCAATGCAGTTCCATGTTTCACTGAACGCGATG
ACCTGGATCGGTCGTATCGGCCTCATCGTTGGACCAGCTATTGCATACTTCATCACTTACCGACTGTGCATCGGCTTGCA
GCGCTCTGACCGCGAGGTCCTGGAGCACGGCATCGAGACCGGTATCATCAAGCAGATGCCAAATGGTGCCTTCATTGAAG
TTCACCAGCCACTTGGCCCAGTTGATGACCATGGTCACCCAATCCCACTGCCATACGCTGGCGCTGCGGTTCCAAAGCAG
ATGAACCAGCTTGGTTACGCTGAGGTTGAAACCCGCGGTGGATTCTTCGGACCTGATCCAGAAGACATCCGTGCGAAGGC
TAAGGAAATTGAGCACGCGAACCACATTGAGGAAGCGAACACTCTTCGTGCACTCAACGAGGCAAACATTGAGCGTGACA
AGAATGAGGGCAAGAACTAG

Upstream 100 bases:

>100_bases
CACTGCCACAGCTGCCAATCACCGTTGATGAAGAGGGCTACCTCATCGCCGCTGGTAACTTCATTGAGCCAGTCGGCCCT
GCATTCTGGGAGCGTAAGTC

Downstream 100 bases:

>100_bases
TTTCTAGGACTTCATCTCTGAAACTCCCCGCTGTAGGGACCTGAATCGAAAGGTCTCCGCATCGGGGAGTTTTTCTCTAT
TCAGACGAGGCTGAAGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome bc1 complex cytochrome b subunit

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MSLATVGNNLDSRYTMASGIRRQINKVFPTHWSFMLGEIALYSFIVLLLTGVYLTLFFDPSITKVIYDGGYLPLNGVEMS
RAYATALDISFEVRGGLFIRQMHHWAALLFVVSMLVHMLRIFFTGAFRRPREANWIIGVVLIILGMAEGFMGYSLPDDLL
SGVGLRIMSAIIVGLPIIGTWMHWLIFGGDFPSDLMLDRFYIAHVLIIPAILLGLIAAHLALVWYQKHTQFPGAGRTENN
VIGIRIMPLFAVKAVAFGLIVFGFLALLAGVTTINAIWNLGPYNPSQVSAGSQPDVYMLWTDGAARVMPAWELYLGNYTI
PAVFWVAVMLGILVVLLVTYPFIERKFTGDDAHHNLLQRPRDVPVRTSLGVMALVFYILLTVSGGNDVYAMQFHVSLNAM
TWIGRIGLIVGPAIAYFITYRLCIGLQRSDREVLEHGIETGIIKQMPNGAFIEVHQPLGPVDDHGHPIPLPYAGAAVPKQ
MNQLGYAEVETRGGFFGPDPEDIRAKAKEIEHANHIEEANTLRALNEANIERDKNEGKN

Sequences:

>Translated_539_residues
MSLATVGNNLDSRYTMASGIRRQINKVFPTHWSFMLGEIALYSFIVLLLTGVYLTLFFDPSITKVIYDGGYLPLNGVEMS
RAYATALDISFEVRGGLFIRQMHHWAALLFVVSMLVHMLRIFFTGAFRRPREANWIIGVVLIILGMAEGFMGYSLPDDLL
SGVGLRIMSAIIVGLPIIGTWMHWLIFGGDFPSDLMLDRFYIAHVLIIPAILLGLIAAHLALVWYQKHTQFPGAGRTENN
VIGIRIMPLFAVKAVAFGLIVFGFLALLAGVTTINAIWNLGPYNPSQVSAGSQPDVYMLWTDGAARVMPAWELYLGNYTI
PAVFWVAVMLGILVVLLVTYPFIERKFTGDDAHHNLLQRPRDVPVRTSLGVMALVFYILLTVSGGNDVYAMQFHVSLNAM
TWIGRIGLIVGPAIAYFITYRLCIGLQRSDREVLEHGIETGIIKQMPNGAFIEVHQPLGPVDDHGHPIPLPYAGAAVPKQ
MNQLGYAEVETRGGFFGPDPEDIRAKAKEIEHANHIEEANTLRALNEANIERDKNEGKN
>Mature_538_residues
SLATVGNNLDSRYTMASGIRRQINKVFPTHWSFMLGEIALYSFIVLLLTGVYLTLFFDPSITKVIYDGGYLPLNGVEMSR
AYATALDISFEVRGGLFIRQMHHWAALLFVVSMLVHMLRIFFTGAFRRPREANWIIGVVLIILGMAEGFMGYSLPDDLLS
GVGLRIMSAIIVGLPIIGTWMHWLIFGGDFPSDLMLDRFYIAHVLIIPAILLGLIAAHLALVWYQKHTQFPGAGRTENNV
IGIRIMPLFAVKAVAFGLIVFGFLALLAGVTTINAIWNLGPYNPSQVSAGSQPDVYMLWTDGAARVMPAWELYLGNYTIP
AVFWVAVMLGILVVLLVTYPFIERKFTGDDAHHNLLQRPRDVPVRTSLGVMALVFYILLTVSGGNDVYAMQFHVSLNAMT
WIGRIGLIVGPAIAYFITYRLCIGLQRSDREVLEHGIETGIIKQMPNGAFIEVHQPLGPVDDHGHPIPLPYAGAAVPKQM
NQLGYAEVETRGGFFGPDPEDIRAKAKEIEHANHIEEANTLRALNEANIERDKNEGKN

Specific function: Component of the menaquinol-cytochrome c reductase complex

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family

Homologues:

Organism=Homo sapiens, GI251831119, Length=189, Percent_Identity=28.042328042328, Blast_Score=70, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): QCRB_CORGL (Q79VE9)

Other databases:

- EMBL:   AJ306418
- EMBL:   AB047851
- EMBL:   BA000036
- EMBL:   BX927154
- RefSeq:   NP_601393.1
- RefSeq:   YP_226431.1
- ProteinModelPortal:   Q79VE9
- SMR:   Q79VE9
- GeneID:   1020141
- GeneID:   3344616
- GenomeReviews:   BA000036_GR
- GenomeReviews:   BX927147_GR
- KEGG:   cgb:cg2403
- KEGG:   cgl:NCgl2109
- HOGENOM:   HBG496972
- OMA:   QPDWYIG
- PhylomeDB:   Q79VE9
- ProtClustDB:   CLSK2754361
- BioCyc:   CGLU196627:CG2403-MONOMER
- GO:   GO:0006810
- InterPro:   IPR016175
- InterPro:   IPR005797
- InterPro:   IPR016174
- Gene3D:   G3DSA:1.20.810.10
- PANTHER:   PTHR19271

Pfam domain/function: SSF81342 Transmembr_di-haem_cytochrome

EC number: NA

Molecular weight: Translated: 59810; Mature: 59679

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS51002 CYTB_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1dffd7bc)-; HASH(0x1d8995bc)-; HASH(0x1e37c0ac)-; HASH(0x1e1e8fdc)-; HASH(0x1e3c2f58)-; HASH(0x1e38d8e8)-; HASH(0x1e3d18f8)-; HASH(0x1dd14774)-; HASH(0x1dd85f68)-;

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
>Mature Secondary Structure 
SLATVGNNLDSRYTMASGIRRQINKVFPTHWSFMLGEIALYSFIVLLLTGVYLTLFFDP
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SITKVIYDGGYLPLNGVEMSRAYATALDISFEVRGGLFIRQMHHWAALLFVVSMLVHMLR
CCEEEEECCCCCCCCCCHHHHHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
IFFTGAFRRPREANWIIGVVLIILGMAEGFMGYSLPDDLLSGVGLRIMSAIIVGLPIIGT
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
WMHWLIFGGDFPSDLMLDRFYIAHVLIIPAILLGLIAAHLALVWYQKHTQFPGAGRTENN
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
VIGIRIMPLFAVKAVAFGLIVFGFLALLAGVTTINAIWNLGPYNPSQVSAGSQPDVYMLW
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE
TDGAARVMPAWELYLGNYTIPAVFWVAVMLGILVVLLVTYPFIERKFTGDDAHHNLLQRP
CCCCCHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
RDVPVRTSLGVMALVFYILLTVSGGNDVYAMQFHVSLNAMTWIGRIGLIVGPAIAYFITY
CCCCCCCHHHHHHHHHHHHHEECCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
RLCIGLQRSDREVLEHGIETGIIKQMPNGAFIEVHQPLGPVDDHGHPIPLPYAGAAVPKQ
HHHHCCCCCCHHHHHHCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHH
MNQLGYAEVETRGGFFGPDPEDIRAKAKEIEHANHIEEANTLRALNEANIERDKNEGKN
HHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11382224; 12948626