| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is aroE [H]
Identifier: 145295751
GI number: 145295751
Start: 1863059
End: 1863889
Strand: Reverse
Name: aroE [H]
Synonym: cgR_1677
Alternate gene names: 145295751
Gene position: 1863889-1863059 (Counterclockwise)
Preceding gene: 145295752
Following gene: 145295747
Centisome position: 56.24
GC content: 60.77
Gene sequence:
>831_bases TTGGGTTCTCACATCACTCACCGGGCGGCCGTACTCGGCTCACCCATCGAGCATTCCAAATCCCCAGTCCTCCACAACAC CGGCTATAAAGCCCTCGGACTGGACCAATGGGAATACGACCGCTTTGAGTGCACCGGCGACATGCTCCCCGGAATCGTCT CCGGCGCTGATGAAACCTACCGCGGATTCTCCGTCACTATGCCGTCCAAATTCGCAGCCCTCGAATTCGCCGACGAAGTA ACCGAACGCGCCCGCGCCATCGGCTCCGCAAACACACTTCTGCGCACCGAAACCGGATGGCGCGCAGACAACACCGACGT CGACGGCATCAGGGGAGCCCTCGGTGAACTCCTCGGCAGCGCATCACTGGCCGGCAAACACGCCATCGTCATCGGCTCCG GCGGCACCGCACGCCCCGCCATCTGGGCACTCATCGAAGCCGGGGTCGCGCGGATCACGGTGCTCAACCGCTCCGATCGA ACCGCCGAACTGCAAACGCTTTTCGACGAAACCCCCACCACCTTGGCCTACGCCCCGCTCGAACATCTCGACATCGAAGC CGACGTCGTAGTCTCTACAGTGCCCTCCGCAGCAATCGCAGGCCTCGAAGACACACTCGCAATCGCCCCAGTCCTCGACG TCATCTACGATCCTTGGCCAACACCACTCGTAGAAGTCGCACGAGCCAAAGGTCTCAAAGCTGTCGGAGGCCACGTCATG CTGGCACACCAGTCCTACGGACAGTTTGAACAATTCACCGGAATGGATGCACCCCGCGATGCTATGCGTGAGGCTTTGGA AGAATCCCTAGGCATCTCGGAAGAACACTAG
Upstream 100 bases:
>100_bases ACCGTGTTCAACGACACCTTCGAAGAGCACGAAGCCGACATTGAGCAAGCTTTGAACAGTGGCGTTCTAGACAGCAACCG ATAAGGATCAACGAATAAAA
Downstream 100 bases:
>100_bases GTCCCTCTGGTGGCGGCCAAGGGGCGACTTCGCATCACCCGACTTCTCACGCTCAACTTCGCTAGGAAATCCGGGGGATT CCGAGGGAAGTCGTGTGATG
Product: shikimate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MGSHITHRAAVLGSPIEHSKSPVLHNTGYKALGLDQWEYDRFECTGDMLPGIVSGADETYRGFSVTMPSKFAALEFADEV TERARAIGSANTLLRTETGWRADNTDVDGIRGALGELLGSASLAGKHAIVIGSGGTARPAIWALIEAGVARITVLNRSDR TAELQTLFDETPTTLAYAPLEHLDIEADVVVSTVPSAAIAGLEDTLAIAPVLDVIYDPWPTPLVEVARAKGLKAVGGHVM LAHQSYGQFEQFTGMDAPRDAMREALEESLGISEEH
Sequences:
>Translated_276_residues MGSHITHRAAVLGSPIEHSKSPVLHNTGYKALGLDQWEYDRFECTGDMLPGIVSGADETYRGFSVTMPSKFAALEFADEV TERARAIGSANTLLRTETGWRADNTDVDGIRGALGELLGSASLAGKHAIVIGSGGTARPAIWALIEAGVARITVLNRSDR TAELQTLFDETPTTLAYAPLEHLDIEADVVVSTVPSAAIAGLEDTLAIAPVLDVIYDPWPTPLVEVARAKGLKAVGGHVM LAHQSYGQFEQFTGMDAPRDAMREALEESLGISEEH >Mature_275_residues GSHITHRAAVLGSPIEHSKSPVLHNTGYKALGLDQWEYDRFECTGDMLPGIVSGADETYRGFSVTMPSKFAALEFADEVT ERARAIGSANTLLRTETGWRADNTDVDGIRGALGELLGSASLAGKHAIVIGSGGTARPAIWALIEAGVARITVLNRSDRT AELQTLFDETPTTLAYAPLEHLDIEADVVVSTVPSAAIAGLEDTLAIAPVLDVIYDPWPTPLVEVARAKGLKAVGGHVML AHQSYGQFEQFTGMDAPRDAMREALEESLGISEEH
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1787983, Length=289, Percent_Identity=29.0657439446367, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1789675, Length=272, Percent_Identity=30.8823529411765, Blast_Score=84, Evalue=9e-18, Organism=Saccharomyces cerevisiae, GI6320332, Length=279, Percent_Identity=33.6917562724014, Blast_Score=135, Evalue=7e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 [H]
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N [H]
EC number: =1.1.1.25 [H]
Molecular weight: Translated: 29447; Mature: 29316
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSHITHRAAVLGSPIEHSKSPVLHNTGYKALGLDQWEYDRFECTGDMLPGIVSGADETY CCCCHHHHHHHHCCCHHHCCCCCEECCCCCEECCCCCCCCHHEECCHHCCHHHCCCCCCC RGFSVTMPSKFAALEFADEVTERARAIGSANTLLRTETGWRADNTDVDGIRGALGELLGS CCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHC ASLAGKHAIVIGSGGTARPAIWALIEAGVARITVLNRSDRTAELQTLFDETPTTLAYAPL CCCCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCH EHLDIEADVVVSTVPSAAIAGLEDTLAIAPVLDVIYDPWPTPLVEVARAKGLKAVGGHVM HHCCCCHHHEEECCCHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCCEEE LAHQSYGQFEQFTGMDAPRDAMREALEESLGISEEH EEECCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GSHITHRAAVLGSPIEHSKSPVLHNTGYKALGLDQWEYDRFECTGDMLPGIVSGADETY CCCHHHHHHHHCCCHHHCCCCCEECCCCCEECCCCCCCCHHEECCHHCCHHHCCCCCCC RGFSVTMPSKFAALEFADEVTERARAIGSANTLLRTETGWRADNTDVDGIRGALGELLGS CCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHC ASLAGKHAIVIGSGGTARPAIWALIEAGVARITVLNRSDRTAELQTLFDETPTTLAYAPL CCCCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHCCCCEEEECCH EHLDIEADVVVSTVPSAAIAGLEDTLAIAPVLDVIYDPWPTPLVEVARAKGLKAVGGHVM HHCCCCHHHEEECCCHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCCEEE LAHQSYGQFEQFTGMDAPRDAMREALEESLGISEEH EEECCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA