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The map label for this gene is rpe [H]

Identifier: 145295719

GI number: 145295719

Start: 1831443

End: 1832102

Strand: Reverse

Name: rpe [H]

Synonym: cgR_1646

Alternate gene names: 145295719

Gene position: 1832102-1831443 (Counterclockwise)

Preceding gene: 145295720

Following gene: 145295718

Centisome position: 55.28

GC content: 55.76

Gene sequence:

>660_bases
ATGGCACAACGTACTCCACTAATCGCCCCATCCATTCTTGCTGCTGATTTCTCCCGCTTGGGGGAGCAGGTGTTAGCTGT
TCCTGATGCTGACTGGATTCACGTCGACATCATGGACGGACACTTCGTTCCAAACTTGAGCTTTGGCGCGGATATCACAG
CTGCGGTCAATCGCGTTACGGACAAAGAACTAGACGTCCACCTGATGATCGAAAACCCAGAGAAGTGGGTGGACAACTAC
ATCGACGCTGGCGCGGACTGCATTGTTTTCCACGTTGAAGCCACCGAAGGTCACGTTGAGTTGGCTAAGTACATCCGTTC
CAAGGGTGTGCGTGCAGGTTTCTCCCTGCGCCCTGGAACTCCCATCGAGGATTACTTGGATGACCTCGAGCACTTCGATG
AAGTCATCGTCATGAGCGTCGAGCCTGGATTCGGCGGCCAAAGCTTCATGCCTGACCAACTGGAAAAGGTTCGTACCCTG
CGCAAGGTCATCGATGAGCGCGGTCTGAACACCGTCATCGAGATCGACGGCGGCATCAGCTCCAAGACCATCAAGCAGGC
TGCCGACGCTGGCGTGGATGCCTTCGTTGCAGGTTCCGCTGTGTACGGCGCTGAGGATCCCAACAAGGCGATCCAGGAGT
TGCGAGCACTCGCGCACTAA

Upstream 100 bases:

>100_bases
GCCACACCGCCACGGCACCGATGCGATGTTTGTGGCTGTACTGCGAAAGAAGTAGACCTGTGAGCTAAGTGGGGTAGACA
AGAGGGCTATGATTTAGGGC

Downstream 100 bases:

>100_bases
ATGGATATTGCGCACGCGTTAGATCTGGCCCACCACGCGTCAGATCAAGTCCGAGGCACCACCAGCCCTAATCCGCCAGT
CGGCGCTGTCATTTTGGACG

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MAQRTPLIAPSILAADFSRLGEQVLAVPDADWIHVDIMDGHFVPNLSFGADITAAVNRVTDKELDVHLMIENPEKWVDNY
IDAGADCIVFHVEATEGHVELAKYIRSKGVRAGFSLRPGTPIEDYLDDLEHFDEVIVMSVEPGFGGQSFMPDQLEKVRTL
RKVIDERGLNTVIEIDGGISSKTIKQAADAGVDAFVAGSAVYGAEDPNKAIQELRALAH

Sequences:

>Translated_219_residues
MAQRTPLIAPSILAADFSRLGEQVLAVPDADWIHVDIMDGHFVPNLSFGADITAAVNRVTDKELDVHLMIENPEKWVDNY
IDAGADCIVFHVEATEGHVELAKYIRSKGVRAGFSLRPGTPIEDYLDDLEHFDEVIVMSVEPGFGGQSFMPDQLEKVRTL
RKVIDERGLNTVIEIDGGISSKTIKQAADAGVDAFVAGSAVYGAEDPNKAIQELRALAH
>Mature_218_residues
AQRTPLIAPSILAADFSRLGEQVLAVPDADWIHVDIMDGHFVPNLSFGADITAAVNRVTDKELDVHLMIENPEKWVDNYI
DAGADCIVFHVEATEGHVELAKYIRSKGVRAGFSLRPGTPIEDYLDDLEHFDEVIVMSVEPGFGGQSFMPDQLEKVRTLR
KVIDERGLNTVIEIDGGISSKTIKQAADAGVDAFVAGSAVYGAEDPNKAIQELRALAH

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=215, Percent_Identity=40.9302325581395, Blast_Score=170, Evalue=9e-43,
Organism=Homo sapiens, GI219879828, Length=215, Percent_Identity=40.4651162790698, Blast_Score=163, Evalue=1e-40,
Organism=Homo sapiens, GI24307923, Length=171, Percent_Identity=36.2573099415205, Blast_Score=112, Evalue=3e-25,
Organism=Escherichia coli, GI1789788, Length=215, Percent_Identity=44.1860465116279, Blast_Score=174, Evalue=3e-45,
Organism=Escherichia coli, GI1790523, Length=195, Percent_Identity=36.4102564102564, Blast_Score=142, Evalue=1e-35,
Organism=Escherichia coli, GI1790754, Length=213, Percent_Identity=30.0469483568075, Blast_Score=103, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17552948, Length=217, Percent_Identity=41.9354838709677, Blast_Score=185, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6322341, Length=225, Percent_Identity=44.4444444444444, Blast_Score=197, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24586301, Length=215, Percent_Identity=42.3255813953488, Blast_Score=182, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23881; Mature: 23750

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQRTPLIAPSILAADFSRLGEQVLAVPDADWIHVDIMDGHFVPNLSFGADITAAVNRVT
CCCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHC
DKELDVHLMIENPEKWVDNYIDAGADCIVFHVEATEGHVELAKYIRSKGVRAGFSLRPGT
CCCCEEEEEEECHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCC
PIEDYLDDLEHFDEVIVMSVEPGFGGQSFMPDQLEKVRTLRKVIDERGLNTVIEIDGGIS
CHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
SKTIKQAADAGVDAFVAGSAVYGAEDPNKAIQELRALAH
HHHHHHHHHCCCHHHHCCCEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
AQRTPLIAPSILAADFSRLGEQVLAVPDADWIHVDIMDGHFVPNLSFGADITAAVNRVT
CCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHC
DKELDVHLMIENPEKWVDNYIDAGADCIVFHVEATEGHVELAKYIRSKGVRAGFSLRPGT
CCCCEEEEEEECHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCC
PIEDYLDDLEHFDEVIVMSVEPGFGGQSFMPDQLEKVRTLRKVIDERGLNTVIEIDGGIS
CHHHHHHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
SKTIKQAADAGVDAFVAGSAVYGAEDPNKAIQELRALAH
HHHHHHHHHCCCHHHHCCCEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]