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The map label for this gene is tpiA [H]

Identifier: 145295707

GI number: 145295707

Start: 1818516

End: 1819295

Strand: Reverse

Name: tpiA [H]

Synonym: cgR_1634

Alternate gene names: 145295707

Gene position: 1819295-1818516 (Counterclockwise)

Preceding gene: 145295708

Following gene: 145295706

Centisome position: 54.89

GC content: 57.69

Gene sequence:

>780_bases
ATGGCACGTAAGCCACTTATCGCTGGTAACTGGAAGATGAACCTGGATCACCAGCAGGCAATCGGCACTGTTCAGAAGCT
TGCATTCGCCCTTCCAAAGGAATACTTCGAGAAGGTTGACGTTGCAGTCACCGTTCCTTTCACTGACATCCGCTCCGTCC
AGACTCTCGTTGAGGGCGACAAGCTTGAGGTCACTTTCGGTGCTCAGGACGTCTCCCAGCACGAGTCCGGTGCGTACACC
GGTGAAGTTTCTGCAAGCATGCTTGCAAAGCTGAACTGCTCTTGGGTTGTCGTTGGACACTCCGAGCGCCGCGAGTACCA
CAACGAGTCTGATGAGTTGGTTGCTGCGAAGGCAAAGGCAGCTCTGTCCAACGGCATCAGCCCGATCGTCTGCGTTGGTG
AGCCACTGGAAATCCGCGAAGCTGGCACCCACGTTGAGTACGTCGTCGAGCAGACCCGCAAGTCACTTGCTGGCCTGGAC
GCTACTGAGCTGGCCAACACCGTTATCGCGTATGAGCCAGTGTGGGCTATCGGCACTGGCAAGGTTGCTTCCGCAGCTGA
CGCTCAGGAAGTGTGCAAGGCTATCCGCGGTCTGATCGTGGAGCTTGCAGGTGACGAGGTCGCTGAAGGCCTGCGCATTC
TTTACGGTGGTTCTGTTAAGGCAGAAACCGTCGCTGAGATCGTCGGACAGCCTGACGTCGACGGCGGACTTGTCGGTGGC
GCTTCCCTCGACGGTGAAGCATTCGCCAAGCTGGCTGCCAACGCTGCGAGCGTCGCTTAA

Upstream 100 bases:

>100_bases
AGGCGTTGCAATTCTCGCTCAGTAAATCCGACACGGCCCTTTTTTAGACAACACAACAAAAGGGCCACCGGGAAACTTTT
TAGAAAGGTGTGTTTCACCC

Downstream 100 bases:

>100_bases
AGCACAGCCTTAAAGCACAAGCACTGTAAAAGTGCGGTTTTGATGCGCCCTGCAGGCCATCGAAATTAATCGCCCAGCCA
AACACAGGTTTTGTTGGGCG

Product: triosephosphate isomerase

Products: NA

Alternate protein names: TIM; Triose-phosphate isomerase [H]

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MARKPLIAGNWKMNLDHQQAIGTVQKLAFALPKEYFEKVDVAVTVPFTDIRSVQTLVEGDKLEVTFGAQDVSQHESGAYT
GEVSASMLAKLNCSWVVVGHSERREYHNESDELVAAKAKAALSNGISPIVCVGEPLEIREAGTHVEYVVEQTRKSLAGLD
ATELANTVIAYEPVWAIGTGKVASAADAQEVCKAIRGLIVELAGDEVAEGLRILYGGSVKAETVAEIVGQPDVDGGLVGG
ASLDGEAFAKLAANAASVA

Sequences:

>Translated_259_residues
MARKPLIAGNWKMNLDHQQAIGTVQKLAFALPKEYFEKVDVAVTVPFTDIRSVQTLVEGDKLEVTFGAQDVSQHESGAYT
GEVSASMLAKLNCSWVVVGHSERREYHNESDELVAAKAKAALSNGISPIVCVGEPLEIREAGTHVEYVVEQTRKSLAGLD
ATELANTVIAYEPVWAIGTGKVASAADAQEVCKAIRGLIVELAGDEVAEGLRILYGGSVKAETVAEIVGQPDVDGGLVGG
ASLDGEAFAKLAANAASVA
>Mature_258_residues
ARKPLIAGNWKMNLDHQQAIGTVQKLAFALPKEYFEKVDVAVTVPFTDIRSVQTLVEGDKLEVTFGAQDVSQHESGAYTG
EVSASMLAKLNCSWVVVGHSERREYHNESDELVAAKAKAALSNGISPIVCVGEPLEIREAGTHVEYVVEQTRKSLAGLDA
TELANTVIAYEPVWAIGTGKVASAADAQEVCKAIRGLIVELAGDEVAEGLRILYGGSVKAETVAEIVGQPDVDGGLVGGA
SLDGEAFAKLAANAASVA

Specific function: Plays an important role in several metabolic pathways. [C]

COG id: COG0149

COG function: function code G; Triosephosphate isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the triosephosphate isomerase family [H]

Homologues:

Organism=Homo sapiens, GI226529917, Length=248, Percent_Identity=41.5322580645161, Blast_Score=173, Evalue=1e-43,
Organism=Homo sapiens, GI4507645, Length=248, Percent_Identity=41.5322580645161, Blast_Score=173, Evalue=1e-43,
Organism=Escherichia coli, GI1790353, Length=247, Percent_Identity=42.914979757085, Blast_Score=184, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI17536593, Length=252, Percent_Identity=44.047619047619, Blast_Score=175, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6320255, Length=247, Percent_Identity=41.2955465587045, Blast_Score=173, Evalue=2e-44,
Organism=Drosophila melanogaster, GI28572004, Length=246, Percent_Identity=40.650406504065, Blast_Score=168, Evalue=3e-42,
Organism=Drosophila melanogaster, GI28572008, Length=247, Percent_Identity=40.080971659919, Blast_Score=168, Evalue=3e-42,
Organism=Drosophila melanogaster, GI28572006, Length=247, Percent_Identity=40.080971659919, Blast_Score=168, Evalue=3e-42,

Paralogues:

None

Copy number: 1120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR022896
- InterPro:   IPR000652
- InterPro:   IPR020861 [H]

Pfam domain/function: PF00121 TIM [H]

EC number: =5.3.1.1 [H]

Molecular weight: Translated: 27233; Mature: 27102

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS00171 TIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKPLIAGNWKMNLDHQQAIGTVQKLAFALPKEYFEKVDVAVTVPFTDIRSVQTLVEGD
CCCCCEEECCEEECCCHHHHHHHHHHHHHHCCHHHHHHCCEEEEECHHHHHHHHHHHCCC
KLEVTFGAQDVSQHESGAYTGEVSASMLAKLNCSWVVVGHSERREYHNESDELVAAKAKA
EEEEEECCHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHCCCCHHHHHHHHHH
ALSNGISPIVCVGEPLEIREAGTHVEYVVEQTRKSLAGLDATELANTVIAYEPVWAIGTG
HHHCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHEEECCEEEECCC
KVASAADAQEVCKAIRGLIVELAGDEVAEGLRILYGGSVKAETVAEIVGQPDVDGGLVGG
CCCCCCCHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCCCHHHHHHHHCCCCCCCCEECC
ASLDGEAFAKLAANAASVA
CCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARKPLIAGNWKMNLDHQQAIGTVQKLAFALPKEYFEKVDVAVTVPFTDIRSVQTLVEGD
CCCCEEECCEEECCCHHHHHHHHHHHHHHCCHHHHHHCCEEEEECHHHHHHHHHHHCCC
KLEVTFGAQDVSQHESGAYTGEVSASMLAKLNCSWVVVGHSERREYHNESDELVAAKAKA
EEEEEECCHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHCCCCHHHHHHHHHH
ALSNGISPIVCVGEPLEIREAGTHVEYVVEQTRKSLAGLDATELANTVIAYEPVWAIGTG
HHHCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHEEECCEEEECCC
KVASAADAQEVCKAIRGLIVELAGDEVAEGLRILYGGSVKAETVAEIVGQPDVDGGLVGG
CCCCCCCHHHHHHHHHHHHHHHCCHHHHCCEEEEECCCCCHHHHHHHHCCCCCCCCEECC
ASLDGEAFAKLAANAASVA
CCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12840036 [H]