| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is tkt [H]
Identifier: 145295697
GI number: 145295697
Start: 1804320
End: 1806413
Strand: Direct
Name: tkt [H]
Synonym: cgR_1624
Alternate gene names: 145295697
Gene position: 1804320-1806413 (Clockwise)
Preceding gene: 145295695
Following gene: 145295698
Centisome position: 54.44
GC content: 58.55
Gene sequence:
>2094_bases TTGACGCTGTCACCTGAACTTCAGGCGCTCACTGTACGCAATTACCCCTCTGATTGGTCCGATGTGGACACCAAGGCTGT AGACACTGTTCGTGTCCTCGCTGCAGACGCTGTAGAAAACTGTGGCTCCGGCCACCCAGGCACCGCAATGAGCCTGGCTC CCCTTGCATACACCTTGTACCAGCGGGTTATGAACGTAGATCCACAGGACACCAACTGGGCAGGCCGTGACCGCTTCGTT CTTTCTTGTGGCCACTCCTCTTTGACCCAGTACATCCAGCTTTACTTGGGTGGATTCGGCCTTGAGATGGATGACCTGAA GGCTCTGCGCACCTGGGATTCCTTGACCCCAGGACACCCTGAGTACCGCCACACCAAGGGCGTTGAGATCACCACTGGCC CTCTTGGCCAGGGTCTTGCATCTGCAGTTGGTATGGCCATGGCTGCTCGTCGTGAGCGTGGCCTATTCGACCCAACCGCT GCTGAGGGCGAATCCCCATTCGACCACCACATCTACGTCATTGCTTCTGATGGTGACCTGCAGGAAGGTGTCACCTCTGA GGCATCCTCCATCGCTGGCACCCAGCAGCTGGGCAACATCATCGTGTTCTGGGATGACAACCGCATCTCCATCGAAGACA ACACTGAGATCGCTTTCAACGAGGACGTTGTTGCTCGTTACAAGGCTTACGGCTGGCAGACCATTGAGGTTGAGGCTGGC GAGGACGTTGCAGCAATCGAAGCTGCAGTGGCTGAGGCTAAGAAGGACACCAAGCGACCTACCTTCATCCGCGTTCGCAC CATCATCGGCTTCCCAGCTCCAACCATGATGAACACCGGTGCTGTGCACGGTGCTGCTCTTGGCGCAGCTGAGGTTGCAG CAACCAAGACTGAGCTTGGATTCGATCCTGAGGCTCACTTCGCGATCGACGACGAGGTCATCGCTCACACCCGCTCCCTC GCAGAGCGCGCTGCAGAGAAGAAGGCTGCATGGCAGGTCAAGTTCGATGAGTGGGCAGCTGCCAACCCTGAGAACAAGGC TCTGTTCGATCGCCTGAACTCCCGTGAGCTTCCAGCGGGCTACGCTGACGAGCTCCCAACATGGGATGCAGATGAGAAGG GCGTCGCAACTCGTAAGGCGTCCGAGGCTGCACTTCAGGCACTGGGCAAGACCCTTCCTGAGCTGTGGGGCGGTTCCGCT GACCTCGCAGGTTCCAACAACACCGTGATCAAGGGCTCCCCTTCCTTCGGCCCTGAGTCCATCTCCACCGAGACCTGGTC TGCTGAGCCTTACGGCCGTAACCTGCACTTCGGTATCCGTGAGCACGCTATGGGATCCATCCTCAACGGCATTTCCCTCC ACGGTGGCACCCGCCCATACGGCGGAACCTTCCTCATCTTCTCCGACTACATGCGTCCTGCAGTTCGTCTTGCAGCTCTC ATGGAGACCGACGCTTACTACGTCTGGACCCACGACTCCATCGGTCTGGGCGAAGATGGCCCAACCCACCAGCCTGTTGA AACCTTGGCTGCACTGCGCGCCATCCCAGGTCTGTCCGTCCTGCGTCCTGCAGATGCGAATGAGACCGCCCAGGCTTGGG CTGCAGCACTTGAGTACAATGAAGGCCCTAAGGGTCTTGCACTGACCCGCCAGAACGTTCCTGTTCTGGAAGGCACCAAG GAGAAGGCTGCTGAAGGCGTTCGCCGCGGTGGCTACGTCCTGGTTGAGGGTTCCAAGGAAACCCCAGATGTGATCCTCAT GGGCTCCGGCTCCGAGGTTCAGCTTGCAGTTAACGCTGCGAAGGCTCTGGAAGCTGAGGGCGTTGCAGCTCGCGTTGTTT CCGTTCCTTGCATGGATTGGTTCCAGGAGCAGGACGCAGAGTACATCGAGTCCGTTCTGCCTGCAGCTGTGACCGCTCGT GTGTCTGTTGAAGCTGGCATCGCAATGCCTTGGTACCGCTTCTTGGGCACCCAGGGCCGTGCTGTCTCCCTTGAGCACTT CGGTGCTTCTGCGGATTACCAGACCCTGTTTGAGAAGTTCGGCATCACCACCGATGCAGTCGTGGCAGCGGCCAAGGACT CCATTAACGGTTAA
Upstream 100 bases:
>100_bases AATTTGAACCAATTAACCTAAGTCGTAGATCTGATCATCGGATCTAACGAAAACGAACCAAAACTTTGGTCCCGGTTTAA CCCAGGAAGGATTGACCACC
Downstream 100 bases:
>100_bases TTGCCCTGCTGTTTTTAGCTTCAACCCGGGGCAATATGATCCTCCGGAATTTTATTGCCCCGGGTTGTTGTTAATCGGTA TAAAGGGTCTTAAGCACATC
Product: transketolase
Products: NA
Alternate protein names: TK [H]
Number of amino acids: Translated: 697; Mature: 696
Protein sequence:
>697_residues MTLSPELQALTVRNYPSDWSDVDTKAVDTVRVLAADAVENCGSGHPGTAMSLAPLAYTLYQRVMNVDPQDTNWAGRDRFV LSCGHSSLTQYIQLYLGGFGLEMDDLKALRTWDSLTPGHPEYRHTKGVEITTGPLGQGLASAVGMAMAARRERGLFDPTA AEGESPFDHHIYVIASDGDLQEGVTSEASSIAGTQQLGNIIVFWDDNRISIEDNTEIAFNEDVVARYKAYGWQTIEVEAG EDVAAIEAAVAEAKKDTKRPTFIRVRTIIGFPAPTMMNTGAVHGAALGAAEVAATKTELGFDPEAHFAIDDEVIAHTRSL AERAAEKKAAWQVKFDEWAAANPENKALFDRLNSRELPAGYADELPTWDADEKGVATRKASEAALQALGKTLPELWGGSA DLAGSNNTVIKGSPSFGPESISTETWSAEPYGRNLHFGIREHAMGSILNGISLHGGTRPYGGTFLIFSDYMRPAVRLAAL METDAYYVWTHDSIGLGEDGPTHQPVETLAALRAIPGLSVLRPADANETAQAWAAALEYNEGPKGLALTRQNVPVLEGTK EKAAEGVRRGGYVLVEGSKETPDVILMGSGSEVQLAVNAAKALEAEGVAARVVSVPCMDWFQEQDAEYIESVLPAAVTAR VSVEAGIAMPWYRFLGTQGRAVSLEHFGASADYQTLFEKFGITTDAVVAAAKDSING
Sequences:
>Translated_697_residues MTLSPELQALTVRNYPSDWSDVDTKAVDTVRVLAADAVENCGSGHPGTAMSLAPLAYTLYQRVMNVDPQDTNWAGRDRFV LSCGHSSLTQYIQLYLGGFGLEMDDLKALRTWDSLTPGHPEYRHTKGVEITTGPLGQGLASAVGMAMAARRERGLFDPTA AEGESPFDHHIYVIASDGDLQEGVTSEASSIAGTQQLGNIIVFWDDNRISIEDNTEIAFNEDVVARYKAYGWQTIEVEAG EDVAAIEAAVAEAKKDTKRPTFIRVRTIIGFPAPTMMNTGAVHGAALGAAEVAATKTELGFDPEAHFAIDDEVIAHTRSL AERAAEKKAAWQVKFDEWAAANPENKALFDRLNSRELPAGYADELPTWDADEKGVATRKASEAALQALGKTLPELWGGSA DLAGSNNTVIKGSPSFGPESISTETWSAEPYGRNLHFGIREHAMGSILNGISLHGGTRPYGGTFLIFSDYMRPAVRLAAL METDAYYVWTHDSIGLGEDGPTHQPVETLAALRAIPGLSVLRPADANETAQAWAAALEYNEGPKGLALTRQNVPVLEGTK EKAAEGVRRGGYVLVEGSKETPDVILMGSGSEVQLAVNAAKALEAEGVAARVVSVPCMDWFQEQDAEYIESVLPAAVTAR VSVEAGIAMPWYRFLGTQGRAVSLEHFGASADYQTLFEKFGITTDAVVAAAKDSING >Mature_696_residues TLSPELQALTVRNYPSDWSDVDTKAVDTVRVLAADAVENCGSGHPGTAMSLAPLAYTLYQRVMNVDPQDTNWAGRDRFVL SCGHSSLTQYIQLYLGGFGLEMDDLKALRTWDSLTPGHPEYRHTKGVEITTGPLGQGLASAVGMAMAARRERGLFDPTAA EGESPFDHHIYVIASDGDLQEGVTSEASSIAGTQQLGNIIVFWDDNRISIEDNTEIAFNEDVVARYKAYGWQTIEVEAGE DVAAIEAAVAEAKKDTKRPTFIRVRTIIGFPAPTMMNTGAVHGAALGAAEVAATKTELGFDPEAHFAIDDEVIAHTRSLA ERAAEKKAAWQVKFDEWAAANPENKALFDRLNSRELPAGYADELPTWDADEKGVATRKASEAALQALGKTLPELWGGSAD LAGSNNTVIKGSPSFGPESISTETWSAEPYGRNLHFGIREHAMGSILNGISLHGGTRPYGGTFLIFSDYMRPAVRLAALM ETDAYYVWTHDSIGLGEDGPTHQPVETLAALRAIPGLSVLRPADANETAQAWAAALEYNEGPKGLALTRQNVPVLEGTKE KAAEGVRRGGYVLVEGSKETPDVILMGSGSEVQLAVNAAKALEAEGVAARVVSVPCMDWFQEQDAEYIESVLPAAVTARV SVEAGIAMPWYRFLGTQGRAVSLEHFGASADYQTLFEKFGITTDAVVAAAKDSING
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=589, Percent_Identity=26.8251273344652, Blast_Score=156, Evalue=7e-38, Organism=Homo sapiens, GI4507521, Length=589, Percent_Identity=26.8251273344652, Blast_Score=156, Evalue=7e-38, Organism=Homo sapiens, GI133778974, Length=683, Percent_Identity=24.0117130307467, Blast_Score=114, Evalue=3e-25, Organism=Escherichia coli, GI48994911, Length=670, Percent_Identity=46.4179104477612, Blast_Score=563, Evalue=1e-162, Organism=Escherichia coli, GI1788808, Length=671, Percent_Identity=44.2622950819672, Blast_Score=518, Evalue=1e-148, Organism=Caenorhabditis elegans, GI17539652, Length=706, Percent_Identity=25.3541076487252, Blast_Score=147, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6325331, Length=682, Percent_Identity=44.1348973607038, Blast_Score=533, Evalue=1e-152, Organism=Saccharomyces cerevisiae, GI6319593, Length=684, Percent_Identity=43.7134502923977, Blast_Score=522, Evalue=1e-149, Organism=Drosophila melanogaster, GI45551847, Length=591, Percent_Identity=25.8883248730964, Blast_Score=151, Evalue=2e-36, Organism=Drosophila melanogaster, GI45550715, Length=591, Percent_Identity=25.8883248730964, Blast_Score=151, Evalue=2e-36, Organism=Drosophila melanogaster, GI24645119, Length=544, Percent_Identity=26.4705882352941, Blast_Score=136, Evalue=5e-32, Organism=Drosophila melanogaster, GI24666278, Length=590, Percent_Identity=25.2542372881356, Blast_Score=134, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 74767; Mature: 74636
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00801 TRANSKETOLASE_1 ; PS00802 TRANSKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSPELQALTVRNYPSDWSDVDTKAVDTVRVLAADAVENCGSGHPGTAMSLAPLAYTLY CCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH QRVMNVDPQDTNWAGRDRFVLSCGHSSLTQYIQLYLGGFGLEMDDLKALRTWDSLTPGHP HHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC EYRHTKGVEITTGPLGQGLASAVGMAMAARRERGLFDPTAAEGESPFDHHIYVIASDGDL CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCH QEGVTSEASSIAGTQQLGNIIVFWDDNRISIEDNTEIAFNEDVVARYKAYGWQTIEVEAG HHCCHHHHHHHHCHHHHCCEEEEECCCEEEECCCCEEEECCHHHHHHHHCCCEEEEEECC EDVAAIEAAVAEAKKDTKRPTFIRVRTIIGFPAPTMMNTGAVHGAALGAAEVAATKTELG CCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHCCCCCCCHHHHCHHHHHHHHHHCC FDPEAHFAIDDEVIAHTRSLAERAAEKKAAWQVKFDEWAAANPENKALFDRLNSRELPAG CCCCCCEEECHHHHHHHHHHHHHHHHHHHEEEEEEHHHCCCCCCCHHHHHHCCCCCCCCC YADELPTWDADEKGVATRKASEAALQALGKTLPELWGGSADLAGSNNTVIKGSPSFGPES CHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCC ISTETWSAEPYGRNLHFGIREHAMGSILNGISLHGGTRPYGGTFLIFSDYMRPAVRLAAL CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCEEEEEHHHHHHHHHHHHH METDAYYVWTHDSIGLGEDGPTHQPVETLAALRAIPGLSVLRPADANETAQAWAAALEYN HHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHCC EGPKGLALTRQNVPVLEGTKEKAAEGVRRGGYVLVEGSKETPDVILMGSGSEVQLAVNAA CCCCCEEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCEEEEEEEHH KALEAEGVAARVVSVPCMDWFQEQDAEYIESVLPAAVTARVSVEAGIAMPWYRFLGTQGR HHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHCCCCC AVSLEHFGASADYQTLFEKFGITTDAVVAAAKDSING EEEHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCC >Mature Secondary Structure TLSPELQALTVRNYPSDWSDVDTKAVDTVRVLAADAVENCGSGHPGTAMSLAPLAYTLY CCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH QRVMNVDPQDTNWAGRDRFVLSCGHSSLTQYIQLYLGGFGLEMDDLKALRTWDSLTPGHP HHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCC EYRHTKGVEITTGPLGQGLASAVGMAMAARRERGLFDPTAAEGESPFDHHIYVIASDGDL CCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCH QEGVTSEASSIAGTQQLGNIIVFWDDNRISIEDNTEIAFNEDVVARYKAYGWQTIEVEAG HHCCHHHHHHHHCHHHHCCEEEEECCCEEEECCCCEEEECCHHHHHHHHCCCEEEEEECC EDVAAIEAAVAEAKKDTKRPTFIRVRTIIGFPAPTMMNTGAVHGAALGAAEVAATKTELG CCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHCCCCCCCHHHHCHHHHHHHHHHCC FDPEAHFAIDDEVIAHTRSLAERAAEKKAAWQVKFDEWAAANPENKALFDRLNSRELPAG CCCCCCEEECHHHHHHHHHHHHHHHHHHHEEEEEEHHHCCCCCCCHHHHHHCCCCCCCCC YADELPTWDADEKGVATRKASEAALQALGKTLPELWGGSADLAGSNNTVIKGSPSFGPES CHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCC ISTETWSAEPYGRNLHFGIREHAMGSILNGISLHGGTRPYGGTFLIFSDYMRPAVRLAAL CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCEEEEEHHHHHHHHHHHHH METDAYYVWTHDSIGLGEDGPTHQPVETLAALRAIPGLSVLRPADANETAQAWAAALEYN HHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHCC EGPKGLALTRQNVPVLEGTKEKAAEGVRRGGYVLVEGSKETPDVILMGSGSEVQLAVNAA CCCCCEEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCEEEEEEEHH KALEAEGVAARVVSVPCMDWFQEQDAEYIESVLPAAVTARVSVEAGIAMPWYRFLGTQGR HHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHCCCCC AVSLEHFGASADYQTLFEKFGITTDAVVAAAKDSING EEEHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]