| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yejH [C]
Identifier: 145295694
GI number: 145295694
Start: 1798632
End: 1800983
Strand: Direct
Name: yejH [C]
Synonym: cgR_1621
Alternate gene names: 145295694
Gene position: 1798632-1800983 (Clockwise)
Preceding gene: 145295693
Following gene: 145295695
Centisome position: 54.27
GC content: 55.99
Gene sequence:
>2352_bases ATGTCCGAACAAAGACTCGATCAGCTTGAGCGACGGCTTTCTGAACTGGAACGGGAGATCGCCGCGATTCGTCAGGAGAT CCGCCAGGAACGCCTAGTGCTTCCGGAACCGGAACCTGTGAAAGATGATACAGTCATCGCCACCGAAGCGACCGGAGTCA ATGCATCGTCGGGTCCGGAGGCGAAGATCGCTTTGTTCATGGAGAGGTTTAGTGGTCGCCACGATGTGTATGCGAGGCGC TGGACCAGCAGAAAAACGGGCAAAAGTGGATGGTCGCCGGCTACTCGCCAGGGTTTTTACTCAAAAGACACCACACCGAA GGACTATCTCCCCTTCACCGCTGACACTGTCAATGCGCATCTGCGCCGGGGTGGTGACCATATCGGTGTCTATGTGATGT TCCCCAACGACACGTGCAAACTTCTCGCCTGCGATTTCGACGATGGCACCTGGAAACAAGATGCGGCCGCTTTCGTGTCA GCCTGCACCGACCACGGAATCGATGCGTTGGCTGAAATTTCTCGATCCGGCGACGGCGCCCACGTATGGATATTTTTCGA TGCCCCAATCTCCGCGATGCTGGCTCGGCGCCTAGGTTTTGCCATGCTCCGCCAAGCCATGAACTCCCGCCCTGACATGG ATATGTCTTCTTATGATCGCTTTTTCCCTGCGCAAGACACCATCGCAACGCGCGCAAACGGAAGCGCACGGCTGGGAAAT TTGATCGCGCTACCCCTCAATGGCGACTGTAGAGCCCGCAACACCGCCGTCTTCGCAGATCCAGAAACGTGGGTCCCTTT TGAAGATCCTTTCGCAGCACTCGCCTCCACCGCACCACTAGCCACCGAAAAAATCGACCAGATCCTTGCCACCACGCAGG AAAAATTTGGCCCCGAACCCGAACACATCAAACGCCCCACCCGCGCCGAACTCAAACAGGTTAAAGCCAACGGCGAAACC ATCAAACTCACCATCACCAACGAACTGTCCGTCCCCACCGAAGGGTTGCCCGCGGCCGTCATCGCGGAGATTAAACACCG GGCGGTAATCCCAAACCCTGAGTTTTATCGTCGACAAGCGCAAAGATTTTCGACCTTCGGCGTGCCGCGCATCGTCATCC GCTTCGCCCAGGCCGAGCAGCGCTTGCTGCTCCCACGCGGGCTTGTCGACGACACCCTCCGGATCCTCACCCTCGCCGGG TACACAGTCAGCGTCATCTGGCCTCGGCAAACTCGGAAAACCATCGACGTGTCCTTCGAGGGCGAATTGCGACCGATGCA ACAGGAGGGAATCGACTCGCTCAAAGGCCAACGCACCGGCGTGTTGGTAGCACCGCCGGGCGCTGGAAAAACAGTGATGG CCTGCGCTCTCATCGCAGATCGTAAAATCTCCACCGCAGTGATAGTCAACCGTGCAGAATTGATTTCCCAATGGCGGGAT CGTCTCGCGCAATACCTGAGCATCGACGCAGACTCCATCGGACAGATCGGCGCGGGCCGACGCAAAACCACCGGAATCAT CGATCTCATCACCGTCCAATCCTTGAGCCGCAAAGATTCCGATCCGAAAATTTTAGAACAATACGGCCAAATCATCGTCG ACGAGTGCCACAACATCGCAGCCCCAGGCGCCGAAGCCGCATTGAACCAGGTCAAAGCCCCCTATTGGCTGGGACTAACT GCCACGCCGTTTCGTTCAGACCACATGGATGAAATCATCACCATGCAGTGCGGTCCTGTGCGCCACCGCATGGAAGTAGT AACAGACAATGAACAGCGCTTGATTCACATCCACGAAACCTCTTTCGACTCTGAGGAAACCACCGAAATCCAGGATCTCT ACAATGAGCTCGCGGTCGATTCTGCCCGAAATGCGCAAATCACTGCCGAAGTGCACAAAGCGCTTGAAGCTGGCGACCGA TGTCTAGTTTTGGTCAACCGAATTGCAGCCCTTGAAGCACTGACCAGCAGCATCTCAGAGTCTGGCGATCACACTGTCTT AGTAATGCATGGCCGCCAAACTCAAGAAGAGCGAGTTCACCTTCGTGCGCAACTTGCCTCATTGAGTGAAAAGCAGGATC CTTTTGTGCTCGTCGCGATGAATAAGGTTGCCGGCGAAGGCCTTGACATCCCCAGCCTCAACACGCTGTTTTTAGCAGCG CCGGTGTCCTTCAAGGGGCTGGTGATTCAGCAAATCGGCCGAGTTACTCGCGCAACCGGTGATCAAAACGCTCCTCCGGT GACTGCCACGGTCCATGATTTTGTTGATTCCAAGATTCCGACACTCAAACGCATGCACGGTCGCCGATTGCGGGCTATGC AAAAGGAAGGATTCGCTGTTTCGGAGCCTTGA
Upstream 100 bases:
>100_bases GTATCGGTAAAAGGCCCAATCAAGGATTCTTGGTTGGGTCTTTTTCCATGCTTTTCATGCTTCGAACAGTCCAGAATAGC CCTGACCTAGACTTAGAGCT
Downstream 100 bases:
>100_bases GGAGGACCAGACCAAACCAGCGTGCCCACGGTTGGCCATTTCAGGATCCGTGGGCACGCTGGTTTGGTTTATCAACCTCG AAACCGGCCACAGCTGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Type III Restriction Res Subunit; Helicase; DNA Repair Helicase; DNA Repair Helicase Rad; DNA Repair Helicase RAD; Superfamily II DNA/RNA Helicase; ATP-Dependent Helicase; Type III Restriction Res Subunit Family; Helicase Domain Protein; DNA Repair Protein Rad; Helicase Domain-Containing Protein; DNA/RNA Helicase; Helicase-Like Protein; ATP-Dependent DNA Helicase; DNA Or RNA Helicase Of Superfamily II; DNA/RNA Repair Helicase; DNA Repair Protein RAD; Phage DEAD Box Family Helicase; DNA Helicase; Helicase DNA Repair; Helicase DNA Repair Rad; XPB/RAD25-Related Helicase; Helicase Protein; ATP-Dependet DEAD/DEAH Box Helicase; Type III Restriction Protein; Nucleic Acid ATP-Dependent Helicase; DNA Repair Protein; DEAD/DEAH Box Helicase; Type III Restriction- System Subunit Res; ATP-Dependent RNA Helicase; RAD25-Type DNA Repair Helicase; DNA Or RNA Helicase Of Superfamily II-Like Protein; Restriction Endonuclease Family Protein; Helicase ATP-Dependent Intein-Containing; Type III Restriction; DNA Or RNA Helicases Of Superfamily II; DEAD/DEAH Box Family Helicase; DNA/RNA Helicase Superfamily II
Number of amino acids: Translated: 783; Mature: 782
Protein sequence:
>783_residues MSEQRLDQLERRLSELEREIAAIRQEIRQERLVLPEPEPVKDDTVIATEATGVNASSGPEAKIALFMERFSGRHDVYARR WTSRKTGKSGWSPATRQGFYSKDTTPKDYLPFTADTVNAHLRRGGDHIGVYVMFPNDTCKLLACDFDDGTWKQDAAAFVS ACTDHGIDALAEISRSGDGAHVWIFFDAPISAMLARRLGFAMLRQAMNSRPDMDMSSYDRFFPAQDTIATRANGSARLGN LIALPLNGDCRARNTAVFADPETWVPFEDPFAALASTAPLATEKIDQILATTQEKFGPEPEHIKRPTRAELKQVKANGET IKLTITNELSVPTEGLPAAVIAEIKHRAVIPNPEFYRRQAQRFSTFGVPRIVIRFAQAEQRLLLPRGLVDDTLRILTLAG YTVSVIWPRQTRKTIDVSFEGELRPMQQEGIDSLKGQRTGVLVAPPGAGKTVMACALIADRKISTAVIVNRAELISQWRD RLAQYLSIDADSIGQIGAGRRKTTGIIDLITVQSLSRKDSDPKILEQYGQIIVDECHNIAAPGAEAALNQVKAPYWLGLT ATPFRSDHMDEIITMQCGPVRHRMEVVTDNEQRLIHIHETSFDSEETTEIQDLYNELAVDSARNAQITAEVHKALEAGDR CLVLVNRIAALEALTSSISESGDHTVLVMHGRQTQEERVHLRAQLASLSEKQDPFVLVAMNKVAGEGLDIPSLNTLFLAA PVSFKGLVIQQIGRVTRATGDQNAPPVTATVHDFVDSKIPTLKRMHGRRLRAMQKEGFAVSEP
Sequences:
>Translated_783_residues MSEQRLDQLERRLSELEREIAAIRQEIRQERLVLPEPEPVKDDTVIATEATGVNASSGPEAKIALFMERFSGRHDVYARR WTSRKTGKSGWSPATRQGFYSKDTTPKDYLPFTADTVNAHLRRGGDHIGVYVMFPNDTCKLLACDFDDGTWKQDAAAFVS ACTDHGIDALAEISRSGDGAHVWIFFDAPISAMLARRLGFAMLRQAMNSRPDMDMSSYDRFFPAQDTIATRANGSARLGN LIALPLNGDCRARNTAVFADPETWVPFEDPFAALASTAPLATEKIDQILATTQEKFGPEPEHIKRPTRAELKQVKANGET IKLTITNELSVPTEGLPAAVIAEIKHRAVIPNPEFYRRQAQRFSTFGVPRIVIRFAQAEQRLLLPRGLVDDTLRILTLAG YTVSVIWPRQTRKTIDVSFEGELRPMQQEGIDSLKGQRTGVLVAPPGAGKTVMACALIADRKISTAVIVNRAELISQWRD RLAQYLSIDADSIGQIGAGRRKTTGIIDLITVQSLSRKDSDPKILEQYGQIIVDECHNIAAPGAEAALNQVKAPYWLGLT ATPFRSDHMDEIITMQCGPVRHRMEVVTDNEQRLIHIHETSFDSEETTEIQDLYNELAVDSARNAQITAEVHKALEAGDR CLVLVNRIAALEALTSSISESGDHTVLVMHGRQTQEERVHLRAQLASLSEKQDPFVLVAMNKVAGEGLDIPSLNTLFLAA PVSFKGLVIQQIGRVTRATGDQNAPPVTATVHDFVDSKIPTLKRMHGRRLRAMQKEGFAVSEP >Mature_782_residues SEQRLDQLERRLSELEREIAAIRQEIRQERLVLPEPEPVKDDTVIATEATGVNASSGPEAKIALFMERFSGRHDVYARRW TSRKTGKSGWSPATRQGFYSKDTTPKDYLPFTADTVNAHLRRGGDHIGVYVMFPNDTCKLLACDFDDGTWKQDAAAFVSA CTDHGIDALAEISRSGDGAHVWIFFDAPISAMLARRLGFAMLRQAMNSRPDMDMSSYDRFFPAQDTIATRANGSARLGNL IALPLNGDCRARNTAVFADPETWVPFEDPFAALASTAPLATEKIDQILATTQEKFGPEPEHIKRPTRAELKQVKANGETI KLTITNELSVPTEGLPAAVIAEIKHRAVIPNPEFYRRQAQRFSTFGVPRIVIRFAQAEQRLLLPRGLVDDTLRILTLAGY TVSVIWPRQTRKTIDVSFEGELRPMQQEGIDSLKGQRTGVLVAPPGAGKTVMACALIADRKISTAVIVNRAELISQWRDR LAQYLSIDADSIGQIGAGRRKTTGIIDLITVQSLSRKDSDPKILEQYGQIIVDECHNIAAPGAEAALNQVKAPYWLGLTA TPFRSDHMDEIITMQCGPVRHRMEVVTDNEQRLIHIHETSFDSEETTEIQDLYNELAVDSARNAQITAEVHKALEAGDRC LVLVNRIAALEALTSSISESGDHTVLVMHGRQTQEERVHLRAQLASLSEKQDPFVLVAMNKVAGEGLDIPSLNTLFLAAP VSFKGLVIQQIGRVTRATGDQNAPPVTATVHDFVDSKIPTLKRMHGRRLRAMQKEGFAVSEP
Specific function: Unknown
COG id: COG1061
COG function: function code KL; DNA or RNA helicases of superfamily II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557563, Length=396, Percent_Identity=22.7272727272727, Blast_Score=71, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6322048, Length=354, Percent_Identity=20.3389830508475, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86645; Mature: 86513
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQRLDQLERRLSELEREIAAIRQEIRQERLVLPEPEPVKDDTVIATEATGVNASSGPE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCC AKIALFMERFSGRHDVYARRWTSRKTGKSGWSPATRQGFYSKDTTPKDYLPFTADTVNAH HHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHH LRRGGDHIGVYVMFPNDTCKLLACDFDDGTWKQDAAAFVSACTDHGIDALAEISRSGDGA HHCCCCEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCE HVWIFFDAPISAMLARRLGFAMLRQAMNSRPDMDMSSYDRFFPAQDTIATRANGSARLGN EEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHCCCCCCCCCCC LIALPLNGDCRARNTAVFADPETWVPFEDPFAALASTAPLATEKIDQILATTQEKFGPEP EEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCH EHIKRPTRAELKQVKANGETIKLTITNELSVPTEGLPAAVIAEIKHRAVIPNPEFYRRQA HHHCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH QRFSTFGVPRIVIRFAQAEQRLLLPRGLVDDTLRILTLAGYTVSVIWPRQTRKTIDVSFE HHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCEEEEEECCCCCCEEEEEEC GELRPMQQEGIDSLKGQRTGVLVAPPGAGKTVMACALIADRKISTAVIVNRAELISQWRD CCCCCHHHHCHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RLAQYLSIDADSIGQIGAGRRKTTGIIDLITVQSLSRKDSDPKILEQYGQIIVDECHNIA HHHHHHCCCCHHCCCCCCCCCCCCCEEEHEEHHHHHCCCCCHHHHHHHHHHHHHHHHCCC APGAEAALNQVKAPYWLGLTATPFRSDHMDEIITMQCGPVRHRMEVVTDNEQRLIHIHET CCCHHHHHHHCCCCEEECCCCCCCCCCCHHHEEEECCCCHHHHHEEEECCCCEEEEEECC SFDSEETTEIQDLYNELAVDSARNAQITAEVHKALEAGDRCLVLVNRIAALEALTSSISE CCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC SGDHTVLVMHGRQTQEERVHLRAQLASLSEKQDPFVLVAMNKVAGEGLDIPSLNTLFLAA CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCCCCCCCCCEEEEEC PVSFKGLVIQQIGRVTRATGDQNAPPVTATVHDFVDSKIPTLKRMHGRRLRAMQKEGFAV CCCCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC SEP CCC >Mature Secondary Structure SEQRLDQLERRLSELEREIAAIRQEIRQERLVLPEPEPVKDDTVIATEATGVNASSGPE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCC AKIALFMERFSGRHDVYARRWTSRKTGKSGWSPATRQGFYSKDTTPKDYLPFTADTVNAH HHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHH LRRGGDHIGVYVMFPNDTCKLLACDFDDGTWKQDAAAFVSACTDHGIDALAEISRSGDGA HHCCCCEEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCE HVWIFFDAPISAMLARRLGFAMLRQAMNSRPDMDMSSYDRFFPAQDTIATRANGSARLGN EEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCHHHHCCCCCCCCCCC LIALPLNGDCRARNTAVFADPETWVPFEDPFAALASTAPLATEKIDQILATTQEKFGPEP EEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCH EHIKRPTRAELKQVKANGETIKLTITNELSVPTEGLPAAVIAEIKHRAVIPNPEFYRRQA HHHCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH QRFSTFGVPRIVIRFAQAEQRLLLPRGLVDDTLRILTLAGYTVSVIWPRQTRKTIDVSFE HHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCEEEEEECCCCCCEEEEEEC GELRPMQQEGIDSLKGQRTGVLVAPPGAGKTVMACALIADRKISTAVIVNRAELISQWRD CCCCCHHHHCHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH RLAQYLSIDADSIGQIGAGRRKTTGIIDLITVQSLSRKDSDPKILEQYGQIIVDECHNIA HHHHHHCCCCHHCCCCCCCCCCCCCEEEHEEHHHHHCCCCCHHHHHHHHHHHHHHHHCCC APGAEAALNQVKAPYWLGLTATPFRSDHMDEIITMQCGPVRHRMEVVTDNEQRLIHIHET CCCHHHHHHHCCCCEEECCCCCCCCCCCHHHEEEECCCCHHHHHEEEECCCCEEEEEECC SFDSEETTEIQDLYNELAVDSARNAQITAEVHKALEAGDRCLVLVNRIAALEALTSSISE CCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC SGDHTVLVMHGRQTQEERVHLRAQLASLSEKQDPFVLVAMNKVAGEGLDIPSLNTLFLAA CCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCCCCCCCCCCEEEEEC PVSFKGLVIQQIGRVTRATGDQNAPPVTATVHDFVDSKIPTLKRMHGRRLRAMQKEGFAV CCCCCHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCC SEP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA