| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is 145295692
Identifier: 145295692
GI number: 145295692
Start: 1796556
End: 1797362
Strand: Direct
Name: 145295692
Synonym: cgR_1619
Alternate gene names: NA
Gene position: 1796556-1797362 (Clockwise)
Preceding gene: 145295691
Following gene: 145295693
Centisome position: 54.21
GC content: 54.89
Gene sequence:
>807_bases ATGTCTAAACCTTTTGAAAACTCTGCGCTCCACGGTTCTTCTCGATTCCCAGCTGGAACGTTCACCCCTGCTCCCAAAAG AGCCACCCCGGCAAAAATGTTGGCTGCTCAGGGCAAGATGGAATCCCTGCTGTTTCTTCGCCACGGCGAACAGCAACTGC TCAGCATCATCATTCCCTTGGTCGCGCTCATCGCACTAGCGAATTTTGATTTCATCCCTGGTGAGAACTCCCTCGACAAG ACTTTCCCCTTCGCGCTGGCCACAGCAGCCATGAGCGCTGGTTTTACAGGTCAAGCCATCAGCCTAGCTTTTGACCGCCG CTATGGTGCCCTCAAGCGCACCGGCGCCAGCGGTGTTCCCGCCTGGACGATTATTTTTGGCAAAGTCATCGCAGTCATTG CAGTCACCATTGTGCAGATCATCATTCTCGGTGTGACTGCACTGCTGTTGGGCTGGTCCGCACCTGTCGGTGGTGTGCTC TTTGGCATCGTGACCCTATTTGTGGGTGTTTCCAGCTTCACCGCGCTCGGCATGCTGATGGGCGGAACGTTGTCCTCCGA ATTGGTATTGGCACTGGCTAACTTGATTTGGATTGTACTGTCCGGCCTTGCAGCATGGGCGGTCTTTTCCCCTTCCGTCA ACGCTGAAGGAGTGCTGTCCATCATCCCATCCGTTGCGCTGTCCCAAGGTATGGTTGACGCATTCAACGGCGAACTTCCG TGGCTCCAGCTAGGAATTTTGGTGGGCTGGCTAATTATCACCGGCGTGGCCGCAAACAAGCTATTTAACTTCTCTGCGAG CCGCTAG
Upstream 100 bases:
>100_bases GCCAAAACGTCATGATTCGCTCTTTGGATACGGGACACCGCTCATTGGAAGATGTCTTCCTGGACATCACCGGAAAAGAA CTGAGGAGTTAACGCACACC
Downstream 100 bases:
>100_bases ATATACCCTTAGTCGGAAAATATCCTTAAAAGTTCCCGGGAGTTTCAGTGGCAAATACCACCACTTCCATACCGGGAACA ATTGTATAAAACTAGCCATG
Product: hypothetical protein
Products: NA
Alternate protein names: ABC Transporter Permease Protein; ABC-Type Multidrug Transport System Permease Component; Integral Membrane Transporter; Multidrug ABC Transporter Inner Membrane Protein; ABC Transporter Permease; ABC-Type Efflux System Permease; ABC Transport System Permease Protein; ABC Drug Efflux Pump Inner Membrane Subunit DrrB Family; ABC Transporter; Multidrug ABC Transporter Permease; ABC Transporter Protein; Abc-2 Type Transporter Integral Membrane Subunit; ABC Transporter Efflux Protein DrrB Family Protein; ABC Transporter Membrane Protein; ABC Transporter-Associated Permease; Antibiotic ABC Transporter Transmembrane Protein; ABC Drug Resistance Transporter Inner Membrane Subunit; ABC-2 Type Transport System Permease Protein
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSKPFENSALHGSSRFPAGTFTPAPKRATPAKMLAAQGKMESLLFLRHGEQQLLSIIIPLVALIALANFDFIPGENSLDK TFPFALATAAMSAGFTGQAISLAFDRRYGALKRTGASGVPAWTIIFGKVIAVIAVTIVQIIILGVTALLLGWSAPVGGVL FGIVTLFVGVSSFTALGMLMGGTLSSELVLALANLIWIVLSGLAAWAVFSPSVNAEGVLSIIPSVALSQGMVDAFNGELP WLQLGILVGWLIITGVAANKLFNFSASR
Sequences:
>Translated_268_residues MSKPFENSALHGSSRFPAGTFTPAPKRATPAKMLAAQGKMESLLFLRHGEQQLLSIIIPLVALIALANFDFIPGENSLDK TFPFALATAAMSAGFTGQAISLAFDRRYGALKRTGASGVPAWTIIFGKVIAVIAVTIVQIIILGVTALLLGWSAPVGGVL FGIVTLFVGVSSFTALGMLMGGTLSSELVLALANLIWIVLSGLAAWAVFSPSVNAEGVLSIIPSVALSQGMVDAFNGELP WLQLGILVGWLIITGVAANKLFNFSASR >Mature_267_residues SKPFENSALHGSSRFPAGTFTPAPKRATPAKMLAAQGKMESLLFLRHGEQQLLSIIIPLVALIALANFDFIPGENSLDKT FPFALATAAMSAGFTGQAISLAFDRRYGALKRTGASGVPAWTIIFGKVIAVIAVTIVQIIILGVTALLLGWSAPVGGVLF GIVTLFVGVSSFTALGMLMGGTLSSELVLALANLIWIVLSGLAAWAVFSPSVNAEGVLSIIPSVALSQGMVDAFNGELPW LQLGILVGWLIITGVAANKLFNFSASR
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27971; Mature: 27840
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPFENSALHGSSRFPAGTFTPAPKRATPAKMLAAQGKMESLLFLRHGEQQLLSIIIPL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHH VALIALANFDFIPGENSLDKTFPFALATAAMSAGFTGQAISLAFDRRYGALKRTGASGVP HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC AWTIIFGKVIAVIAVTIVQIIILGVTALLLGWSAPVGGVLFGIVTLFVGVSSFTALGMLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GGTLSSELVLALANLIWIVLSGLAAWAVFSPSVNAEGVLSIIPSVALSQGMVDAFNGELP CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCC WLQLGILVGWLIITGVAANKLFNFSASR HHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SKPFENSALHGSSRFPAGTFTPAPKRATPAKMLAAQGKMESLLFLRHGEQQLLSIIIPL CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHH VALIALANFDFIPGENSLDKTFPFALATAAMSAGFTGQAISLAFDRRYGALKRTGASGVP HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCC AWTIIFGKVIAVIAVTIVQIIILGVTALLLGWSAPVGGVLFGIVTLFVGVSSFTALGMLM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GGTLSSELVLALANLIWIVLSGLAAWAVFSPSVNAEGVLSIIPSVALSQGMVDAFNGELP CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCC WLQLGILVGWLIITGVAANKLFNFSASR HHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA