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The map label for this gene is sufD [C]

Identifier: 145295687

GI number: 145295687

Start: 1790091

End: 1791269

Strand: Reverse

Name: sufD [C]

Synonym: cgR_1614

Alternate gene names: 145295687

Gene position: 1791269-1790091 (Counterclockwise)

Preceding gene: 145295688

Following gene: 145295686

Centisome position: 54.05

GC content: 58.35

Gene sequence:

>1179_bases
ATGACTGAAGTAGCAACCGTAAAGGCCGCAACCCCGCACAACACCAAGGGCGACCTCTTTTCCTCATTTAATGTTGAGGA
CTTTGAGATCCCACGCGGACGCGACGAAGAATGGCGTTTCATTTCCCTACGCCGTCTTCGCGGACTCCACAACGGCGAGT
TCGCACCTGCAACCACCTCTGACGTCACCGTCGAGATCCCTGCAGATGCAGAAGGCGCAAGCCACGAAGTTGTCGCAAAG
GACGATGCTCGACTGGGTCGCGCAGGCGCACCAGTAGACCGCGTCGCAGCTCAGGCCTGGACCTCCAAGGAACAGGGCAA
TGTTGTCACCTTTGCCAAAAACTCCCACAACCCAACCCCAGTAACCATCACGGTTACTGGCAAGGGTGAAGGCGTCACCT
CTTTCGGCGCAATCTCCATCGAGGTTGAAGCAGGCGCAGACGCTATCGTCGCACTGCAGTACGTGGGATCCGGCACCCAT
GCTGACAACGTCGAATTCATCGTTGGTGACAACGCACGCCTGACCGTCATCACCGACACCCACTGGAACGGCGACGCAGT
TCACCTGAGCAACCAGCTAGCACAGCTGGGACGCGACGCAACTCTACGCCACACCGTGGCAACCTTCGGTGGAGAAGTAG
TCCGCATCGTCCCACGCGTGCGTTTCACCGCACCAGGTGGCGACGCAGAAATGCTCGGCGTCTACTTCGCAGATGATGGA
CAGTACTTCGAGCAGCGCCTGCTGGTTGACCACGCTGTACCAAACTGCCGCTCCAACGTCTTGTACAAGGGCGCGCTTCA
GGGTGACAAGAACTCTGCCAAGCCAGATGCCCGTACCTGCTGGGTTGGCGATGTGCTCATCCGCTCAAACGCCCACGGCA
CTGACACCTACGAAGCTAACCGCTCACTCGTCCTCACCGAGGGTGCACGCGCAGACGCTATTCCAAACCTCGAGATTGAA
ACCGGCCAGATCGTTGGCGCAGGACACGCAGCAACCGTCGGTCGTTTCGACGACGAGCACGTGTTCTACCTCCAGGCCCG
TGGTATTCCTGCAGAGGAAGCACGCCGCCTCATCGTCCGCGGTTTCTTCAACGAAGTGATCAACAAGGTCCCAGTTGAAT
CCATCCGCGAGGAATTGGACAACCGAGTCAGCTCGGAACTCGCAGTTCTTGGCATGTAA

Upstream 100 bases:

>100_bases
GCTTCGTTGAGCCAATCGCTAAGGAACTCCCAATGGAGTACGCCCTTGAGCTCAACCGACTGATCGAACTGCAGATGGAA
GGATCGGTGGGCTAAGCCCA

Downstream 100 bases:

>100_bases
TTAAGCCAAAGTAACTAAGCCAAGTGGCTAAGCACAGTTACTTGGCCAAGCTGGGCGGTAGAAAAACCGGCCCAGCTAAT
ACTTCAGTTTAAAATTCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 391

Protein sequence:

>392_residues
MTEVATVKAATPHNTKGDLFSSFNVEDFEIPRGRDEEWRFISLRRLRGLHNGEFAPATTSDVTVEIPADAEGASHEVVAK
DDARLGRAGAPVDRVAAQAWTSKEQGNVVTFAKNSHNPTPVTITVTGKGEGVTSFGAISIEVEAGADAIVALQYVGSGTH
ADNVEFIVGDNARLTVITDTHWNGDAVHLSNQLAQLGRDATLRHTVATFGGEVVRIVPRVRFTAPGGDAEMLGVYFADDG
QYFEQRLLVDHAVPNCRSNVLYKGALQGDKNSAKPDARTCWVGDVLIRSNAHGTDTYEANRSLVLTEGARADAIPNLEIE
TGQIVGAGHAATVGRFDDEHVFYLQARGIPAEEARRLIVRGFFNEVINKVPVESIREELDNRVSSELAVLGM

Sequences:

>Translated_392_residues
MTEVATVKAATPHNTKGDLFSSFNVEDFEIPRGRDEEWRFISLRRLRGLHNGEFAPATTSDVTVEIPADAEGASHEVVAK
DDARLGRAGAPVDRVAAQAWTSKEQGNVVTFAKNSHNPTPVTITVTGKGEGVTSFGAISIEVEAGADAIVALQYVGSGTH
ADNVEFIVGDNARLTVITDTHWNGDAVHLSNQLAQLGRDATLRHTVATFGGEVVRIVPRVRFTAPGGDAEMLGVYFADDG
QYFEQRLLVDHAVPNCRSNVLYKGALQGDKNSAKPDARTCWVGDVLIRSNAHGTDTYEANRSLVLTEGARADAIPNLEIE
TGQIVGAGHAATVGRFDDEHVFYLQARGIPAEEARRLIVRGFFNEVINKVPVESIREELDNRVSSELAVLGM
>Mature_391_residues
TEVATVKAATPHNTKGDLFSSFNVEDFEIPRGRDEEWRFISLRRLRGLHNGEFAPATTSDVTVEIPADAEGASHEVVAKD
DARLGRAGAPVDRVAAQAWTSKEQGNVVTFAKNSHNPTPVTITVTGKGEGVTSFGAISIEVEAGADAIVALQYVGSGTHA
DNVEFIVGDNARLTVITDTHWNGDAVHLSNQLAQLGRDATLRHTVATFGGEVVRIVPRVRFTAPGGDAEMLGVYFADDGQ
YFEQRLLVDHAVPNCRSNVLYKGALQGDKNSAKPDARTCWVGDVLIRSNAHGTDTYEANRSLVLTEGARADAIPNLEIET
GQIVGAGHAATVGRFDDEHVFYLQARGIPAEEARRLIVRGFFNEVINKVPVESIREELDNRVSSELAVLGM

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=394, Percent_Identity=26.6497461928934, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 42295; Mature: 42163

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEVATVKAATPHNTKGDLFSSFNVEDFEIPRGRDEEWRFISLRRLRGLHNGEFAPATTS
CCCEEEEEECCCCCCCCCCEECCCCCEEECCCCCCCCCEEEEEHHHCCCCCCCCCCCCCC
DVTVEIPADAEGASHEVVAKDDARLGRAGAPVDRVAAQAWTSKEQGNVVTFAKNSHNPTP
CEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCC
VTITVTGKGEGVTSFGAISIEVEAGADAIVALQYVGSGTHADNVEFIVGDNARLTVITDT
EEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEECCCCEEEEEEEC
HWNGDAVHLSNQLAQLGRDATLRHTVATFGGEVVRIVPRVRFTAPGGDAEMLGVYFADDG
CCCCCEEEHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEEEEECCCCCCEEEEEEEECCC
QYFEQRLLVDHAVPNCRSNVLYKGALQGDKNSAKPDARTCWVGDVLIRSNAHGTDTYEAN
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCC
RSLVLTEGARADAIPNLEIETGQIVGAGHAATVGRFDDEHVFYLQARGIPAEEARRLIVR
CEEEEECCCCCCCCCCCEEECCEEEECCCCEEECCCCCCEEEEEEECCCCHHHHHHHHHH
GFFNEVINKVPVESIREELDNRVSSELAVLGM
HHHHHHHHHCCHHHHHHHHHHHHHHCEEEECC
>Mature Secondary Structure 
TEVATVKAATPHNTKGDLFSSFNVEDFEIPRGRDEEWRFISLRRLRGLHNGEFAPATTS
CCEEEEEECCCCCCCCCCEECCCCCEEECCCCCCCCCEEEEEHHHCCCCCCCCCCCCCC
DVTVEIPADAEGASHEVVAKDDARLGRAGAPVDRVAAQAWTSKEQGNVVTFAKNSHNPTP
CEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCC
VTITVTGKGEGVTSFGAISIEVEAGADAIVALQYVGSGTHADNVEFIVGDNARLTVITDT
EEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEECCCCEEEEEEEC
HWNGDAVHLSNQLAQLGRDATLRHTVATFGGEVVRIVPRVRFTAPGGDAEMLGVYFADDG
CCCCCEEEHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEEEEECCCCCCEEEEEEEECCC
QYFEQRLLVDHAVPNCRSNVLYKGALQGDKNSAKPDARTCWVGDVLIRSNAHGTDTYEAN
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCC
RSLVLTEGARADAIPNLEIETGQIVGAGHAATVGRFDDEHVFYLQARGIPAEEARRLIVR
CEEEEECCCCCCCCCCCEEECCEEEECCCCEEECCCCCCEEEEEEECCCCHHHHHHHHHH
GFFNEVINKVPVESIREELDNRVSSELAVLGM
HHHHHHHHHCCHHHHHHHHHHHHHHCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]