| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is hemH
Identifier: 145295668
GI number: 145295668
Start: 1764961
End: 1766073
Strand: Reverse
Name: hemH
Synonym: cgR_1595
Alternate gene names: 145295668
Gene position: 1766073-1764961 (Counterclockwise)
Preceding gene: 145295669
Following gene: 145295666
Centisome position: 53.29
GC content: 55.62
Gene sequence:
>1113_bases ATGAATGAACGCACATCGGATGCATTTGACGCCCTCCTTGTGCTCTCCTTCGGTGGTCCCGAAGGGCACGAGGAGGTTCG TCCATTTTTGGAGAATGTCACTCGCGGAAGGGGGATCCCGCCGGAACGTCTAGATGATGTGGCGGTTCATTACCACCACT TCGGTGGTATCAGCCCGATCAATGCGCTGAACAGGGAAATTATCGCCAATGTGGAAAAAGAATTGGCGTCTCGAAACCGC GAGCTGCCTGTCTATTTTGGCAACCGCAACTGGAAGCCGTTTGGTAATGAGGCCGCTGAACAAATGGCTGATGACGGCGT GAAGAACGCGCTGGTGTTGGCAACTTCCGCGTGGGGTGGCTACTCAGGTTGCCAGCAATACCAGGAAGATATTCGGGGCA TGATCAAGCACTTGGAGTCCCAGGGGCAGTCGGTCACGTTCACCAAGTTGCGTCAGTTCTACGATCACCCTCGTTTTGTC TCCACCATGGCTCAATTGGTTCAGGATTCCTACGCGAAGCTTCCTGATGAGCTGCGCGACGAGGCGCGTTTGGTTTTCAC TGCGCACTCCATTCCGCTGGCTGCGGACAATGCTGCGGGAACCCCTCAGGATGGTTCCTTGTATTCCTCACAGGTCAAGG AAGCATCAGCGTTGATTGCTAAGGCTGTTGGTGTGTCAGATTTTGATGTGGTGTGGCAGTCGCGTTCAGGCAGTCCGCAC ACTCCGTGGCTGGAGCCTGACATCGTGGATCACGCAGTTGAGCTCAACGAGAAGGGTCAGAAAGCACTCGTTGTCTGCCC TGTAGGCTTTATTTCCGATCATATGGAAGTCATTTGGGATCTTGATTCCGAGCTGATGGAAGAAGCAGAGAAGCGCAACA TGGTGGTCGAGCGCGTCGCTACCGTTGGCCCCACCGATGAATTCGCAGCCCTAGTGGTTGATCTCATCGAGGAAGCGGAG CTCAAGCGCGTTATCGAGCGTCTTGGAAAGCTACCAGCTCGCGGAAGCTCCATCAATGGCGCACCGTGTAGCGAAGGCTG CTGTGGCACCGCCAAGCATCAAACTGCGCGGGTGAACCCCAACGCTCGCTCAGCGGCGCCAGCTGCCAACTAG
Upstream 100 bases:
>100_bases ACTGAGAGTGTGGTACGCCTCATTTAGTTTCATCCTATGAATCTTGGTGTGGTTCATGCGTTTTTATGCAATATCAATCA AAAGTTGGTACGATGCTCGT
Downstream 100 bases:
>100_bases GAGTGACAGTCCCTCGCAAACTCTGCGAGGGCATAACTCACCCCAGCCATGCGCGCGGTCCGAATATGGCTCCACAGGGA AATCAATTGCGGATCCAGGC
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase
Number of amino acids: Translated: 370; Mature: 370
Protein sequence:
>370_residues MNERTSDAFDALLVLSFGGPEGHEEVRPFLENVTRGRGIPPERLDDVAVHYHHFGGISPINALNREIIANVEKELASRNR ELPVYFGNRNWKPFGNEAAEQMADDGVKNALVLATSAWGGYSGCQQYQEDIRGMIKHLESQGQSVTFTKLRQFYDHPRFV STMAQLVQDSYAKLPDELRDEARLVFTAHSIPLAADNAAGTPQDGSLYSSQVKEASALIAKAVGVSDFDVVWQSRSGSPH TPWLEPDIVDHAVELNEKGQKALVVCPVGFISDHMEVIWDLDSELMEEAEKRNMVVERVATVGPTDEFAALVVDLIEEAE LKRVIERLGKLPARGSSINGAPCSEGCCGTAKHQTARVNPNARSAAPAAN
Sequences:
>Translated_370_residues MNERTSDAFDALLVLSFGGPEGHEEVRPFLENVTRGRGIPPERLDDVAVHYHHFGGISPINALNREIIANVEKELASRNR ELPVYFGNRNWKPFGNEAAEQMADDGVKNALVLATSAWGGYSGCQQYQEDIRGMIKHLESQGQSVTFTKLRQFYDHPRFV STMAQLVQDSYAKLPDELRDEARLVFTAHSIPLAADNAAGTPQDGSLYSSQVKEASALIAKAVGVSDFDVVWQSRSGSPH TPWLEPDIVDHAVELNEKGQKALVVCPVGFISDHMEVIWDLDSELMEEAEKRNMVVERVATVGPTDEFAALVVDLIEEAE LKRVIERLGKLPARGSSINGAPCSEGCCGTAKHQTARVNPNARSAAPAAN >Mature_370_residues MNERTSDAFDALLVLSFGGPEGHEEVRPFLENVTRGRGIPPERLDDVAVHYHHFGGISPINALNREIIANVEKELASRNR ELPVYFGNRNWKPFGNEAAEQMADDGVKNALVLATSAWGGYSGCQQYQEDIRGMIKHLESQGQSVTFTKLRQFYDHPRFV STMAQLVQDSYAKLPDELRDEARLVFTAHSIPLAADNAAGTPQDGSLYSSQVKEASALIAKAVGVSDFDVVWQSRSGSPH TPWLEPDIVDHAVELNEKGQKALVVCPVGFISDHMEVIWDLDSELMEEAEKRNMVVERVATVGPTDEFAALVVDLIEEAE LKRVIERLGKLPARGSSINGAPCSEGCCGTAKHQTARVNPNARSAAPAAN
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family
Homologues:
Organism=Homo sapiens, GI60499025, Length=286, Percent_Identity=25.5244755244755, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI60499021, Length=286, Percent_Identity=25.5244755244755, Blast_Score=93, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6324750, Length=326, Percent_Identity=23.6196319018405, Blast_Score=87, Evalue=4e-18, Organism=Drosophila melanogaster, GI17864156, Length=315, Percent_Identity=24.7619047619048, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI45552018, Length=163, Percent_Identity=28.2208588957055, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI24651774, Length=255, Percent_Identity=24.3137254901961, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HEMH_CORGB (A4QEC1)
Other databases:
- EMBL: AP009044 - RefSeq: YP_001138489.1 - ProteinModelPortal: A4QEC1 - SMR: A4QEC1 - STRING: A4QEC1 - GeneID: 4992908 - GenomeReviews: AP009044_GR - KEGG: cgt:cgR_1595 - eggNOG: COG0276 - HOGENOM: HBG697135 - OMA: GNRNWHP - ProtClustDB: PRK00035 - GO: GO:0005737 - HAMAP: MF_00323 - InterPro: IPR001015 - PANTHER: PTHR11108 - TIGRFAMs: TIGR00109
Pfam domain/function: PF00762 Ferrochelatase
EC number: =4.99.1.1
Molecular weight: Translated: 40544; Mature: 40544
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNERTSDAFDALLVLSFGGPEGHEEVRPFLENVTRGRGIPPERLDDVAVHYHHFGGISPI CCCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHH NALNREIIANVEKELASRNRELPVYFGNRNWKPFGNEAAEQMADDGVKNALVLATSAWGG HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCC YSGCQQYQEDIRGMIKHLESQGQSVTFTKLRQFYDHPRFVSTMAQLVQDSYAKLPDELRD HHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHH EARLVFTAHSIPLAADNAAGTPQDGSLYSSQVKEASALIAKAVGVSDFDVVWQSRSGSPH CCEEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCCC TPWLEPDIVDHAVELNEKGQKALVVCPVGFISDHMEVIWDLDSELMEEAEKRNMVVERVA CCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH TVGPTDEFAALVVDLIEEAELKRVIERLGKLPARGSSINGAPCSEGCCGTAKHQTARVNP HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC NARSAAPAAN CCCCCCCCCC >Mature Secondary Structure MNERTSDAFDALLVLSFGGPEGHEEVRPFLENVTRGRGIPPERLDDVAVHYHHFGGISPI CCCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHH NALNREIIANVEKELASRNRELPVYFGNRNWKPFGNEAAEQMADDGVKNALVLATSAWGG HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCC YSGCQQYQEDIRGMIKHLESQGQSVTFTKLRQFYDHPRFVSTMAQLVQDSYAKLPDELRD HHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHH EARLVFTAHSIPLAADNAAGTPQDGSLYSSQVKEASALIAKAVGVSDFDVVWQSRSGSPH CCEEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHEECCCCCCC TPWLEPDIVDHAVELNEKGQKALVVCPVGFISDHMEVIWDLDSELMEEAEKRNMVVERVA CCCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH TVGPTDEFAALVVDLIEEAELKRVIERLGKLPARGSSINGAPCSEGCCGTAKHQTARVNP HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCC NARSAAPAAN CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA