| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is trmI [H]
Identifier: 145295631
GI number: 145295631
Start: 1723062
End: 1723898
Strand: Reverse
Name: trmI [H]
Synonym: cgR_1558
Alternate gene names: 145295631
Gene position: 1723898-1723062 (Counterclockwise)
Preceding gene: 145295632
Following gene: 145295630
Centisome position: 52.02
GC content: 56.39
Gene sequence:
>837_bases ATGCCCTACTCAGGTCCGTTCCAAGCAGGCGACCGCGTTCAGCTCACAGACGCTAAACGCCGCCATTTCACCATCATTTT GGAACCAGGAACCACCTACCACACCCACCGTGGACAAATCGCACACGATGACATCATCGGCGCCGATGAGGGCACTGTTG TCCACTCCACCATGGGCTCTGATTACTTGTGCTTCCGTCACCTCATGGTTGATCACGTGCTGAGCATGCCTCGTGGCGCT GCAGTTATTTATCCAAAGGACTCTGCACAGATTCTGGTCGAGGGCGATATTTTCCCTGGTGCCCGAGTTCTGGAAGCTGG CGCTGGTTCCGGTGCACTGTCCATGTCGCTGCTTCGTGCAGTGGGTGAAAAGGGCAATGTCATCTCCTACGAAATCCGTG AGGATCACCTGGAGTACGCAGTCTCCAACGTGGAGGAGTACTTCGGTGAGCGTCCAGCAACCTGGGATCCACGTCTTGGT GACCTGAAAGAAGTCACCGTTGAGGATCTCGGCGGACCTGTTGACCGCATCATCTTGGATATGCTTGAGCCGTGGGAAAT GCTGGAGACCTGCAAGGATCTTCTCATCCCTGGTGGTGTGTTTATGACGTATGTGGCGACCGTGCCACAGCTGATGAAGG TCATGGAAGGCATCCGCGAGCAGAAGTGCTTCACGGAGCCACGCGCGTGGGAATCTTTGGTTCGTGATTGGAAGGTGGAG GGCTTGGCAACACGCCCTGAGCACCGCATGAATGCCCACACCGCGTTCTTGGTGTTGACCAGGCGTTTGGCTGATGGCGT GGAGCCTCCTCGTCCGCAGCGTAAGGCACGTCGATAA
Upstream 100 bases:
>100_bases AGTGAAGGATCTGATGTGGTTTGAACAAGCCCTGGAAGCCTATCTGGTAAATTAACGCCGAGTTCAATCAAGACAAGCAC ACAGAAGAAAGTGAGGGCTC
Downstream 100 bases:
>100_bases AAAGACCTAGTTGGAGGGCGTAAAGGGTTAGAGTGGTGACCATGAGTTCACCAACTGATTCTTCGCCCTCTAATTCTTTT AGCGACTTCAACCGGGAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: tRNA(m1A58)-methyltransferase; tRNA(m1A58)MTase [H]
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MPYSGPFQAGDRVQLTDAKRRHFTIILEPGTTYHTHRGQIAHDDIIGADEGTVVHSTMGSDYLCFRHLMVDHVLSMPRGA AVIYPKDSAQILVEGDIFPGARVLEAGAGSGALSMSLLRAVGEKGNVISYEIREDHLEYAVSNVEEYFGERPATWDPRLG DLKEVTVEDLGGPVDRIILDMLEPWEMLETCKDLLIPGGVFMTYVATVPQLMKVMEGIREQKCFTEPRAWESLVRDWKVE GLATRPEHRMNAHTAFLVLTRRLADGVEPPRPQRKARR
Sequences:
>Translated_278_residues MPYSGPFQAGDRVQLTDAKRRHFTIILEPGTTYHTHRGQIAHDDIIGADEGTVVHSTMGSDYLCFRHLMVDHVLSMPRGA AVIYPKDSAQILVEGDIFPGARVLEAGAGSGALSMSLLRAVGEKGNVISYEIREDHLEYAVSNVEEYFGERPATWDPRLG DLKEVTVEDLGGPVDRIILDMLEPWEMLETCKDLLIPGGVFMTYVATVPQLMKVMEGIREQKCFTEPRAWESLVRDWKVE GLATRPEHRMNAHTAFLVLTRRLADGVEPPRPQRKARR >Mature_277_residues PYSGPFQAGDRVQLTDAKRRHFTIILEPGTTYHTHRGQIAHDDIIGADEGTVVHSTMGSDYLCFRHLMVDHVLSMPRGAA VIYPKDSAQILVEGDIFPGARVLEAGAGSGALSMSLLRAVGEKGNVISYEIREDHLEYAVSNVEEYFGERPATWDPRLGD LKEVTVEDLGGPVDRIILDMLEPWEMLETCKDLLIPGGVFMTYVATVPQLMKVMEGIREQKCFTEPRAWESLVRDWKVEG LATRPEHRMNAHTAFLVLTRRLADGVEPPRPQRKARR
Specific function: Catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in tRNA. Is required for cell growth at extreme temperatures [H]
COG id: COG2519
COG function: function code J; tRNA(1-methyladenosine) methyltransferase and related methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. TrmI family [H]
Homologues:
Organism=Homo sapiens, GI222831587, Length=246, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014816 [H]
Pfam domain/function: PF08704 GCD14 [H]
EC number: =2.1.1.36 [H]
Molecular weight: Translated: 31178; Mature: 31047
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYSGPFQAGDRVQLTDAKRRHFTIILEPGTTYHTHRGQIAHDDIIGADEGTVVHSTMGS CCCCCCCCCCCEEEEECCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCEEEECCCC DYLCFRHLMVDHVLSMPRGAAVIYPKDSAQILVEGDIFPGARVLEAGAGSGALSMSLLRA HHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCHHHHHCCCCCCHHHHHHHHH VGEKGNVISYEIREDHLEYAVSNVEEYFGERPATWDPRLGDLKEVTVEDLGGPVDRIILD HCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH MLEPWEMLETCKDLLIPGGVFMTYVATVPQLMKVMEGIREQKCFTEPRAWESLVRDWKVE HHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC GLATRPEHRMNAHTAFLVLTRRLADGVEPPRPQRKARR CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC >Mature Secondary Structure PYSGPFQAGDRVQLTDAKRRHFTIILEPGTTYHTHRGQIAHDDIIGADEGTVVHSTMGS CCCCCCCCCCEEEEECCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCCCEEEECCCC DYLCFRHLMVDHVLSMPRGAAVIYPKDSAQILVEGDIFPGARVLEAGAGSGALSMSLLRA HHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCCCHHHHHCCCCCCHHHHHHHHH VGEKGNVISYEIREDHLEYAVSNVEEYFGERPATWDPRLGDLKEVTVEDLGGPVDRIILD HCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHH MLEPWEMLETCKDLLIPGGVFMTYVATVPQLMKVMEGIREQKCFTEPRAWESLVRDWKVE HHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC GLATRPEHRMNAHTAFLVLTRRLADGVEPPRPQRKARR CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA