| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is lnt [H]
Identifier: 145295614
GI number: 145295614
Start: 1702300
End: 1703937
Strand: Reverse
Name: lnt [H]
Synonym: cgR_1541
Alternate gene names: 145295614
Gene position: 1703937-1702300 (Counterclockwise)
Preceding gene: 145295615
Following gene: 145295613
Centisome position: 51.41
GC content: 53.11
Gene sequence:
>1638_bases GTGACACTGTTTATTCGGCTCGCCCTTGCTGCTGTGGGCGGGCTTTTTGTCTTTGCTTCCAATGAACCGATCGGCTGGTT TGTCGCGGGAATTGTTGGCACTGCATTATTTTTTATCTCCCTTGCGCCGTGGGATCTGGGAGTTCCCCAAAAGCGGCGGA AGAAGAATGAGCCAGTCCCATTTTTGCAACAGATGTCCACGGGCCCAACTGTTGTGCAGGGCATGCTTTTAGGTTTTGTT CATGGCCTGGTGACATATTTGCTGCTGTTGCCGTGGATCGGTGAGTTTGTTGGCTCACTGCCTTATGTCGCGTTGTCAGT TGTGGAGGCGCTTTATTCCATTGCTCTTGGTGCTTTCGGCGTGCTCATTGCGCGTTGGAGGGACTGGAAGGTTCTCCTGT TTCCGGCGATGTATGTGGCTGTGGAGTATCTAAGAAGCTCGTGGCCATTTGATGGATTCGCGTGGGTTCGCCTGGCATGG GGTCAAATTAACGGTCCGTTGGCTAATCTCGCAGCGCTTGGTGGGGTAGCGTTTGTCACTTTTTCCACGGTGCTGGCTGC CGTGGGTGTGGCCATGGTGATTATTTCTAAGAAGCGACTGGCCGGCGCAATCATCACCGCGAGTGTGATTGCTATCGGCG CGGTGTCATCCCTGTACGTTGACCGCAATGGCACGAGCGATGAAAGCATCGAAGTAGCCGCAATTCAGGGCAATGTGCCT CGGATGGGATTGGACTTCAATGCGCAGCGCCGCGCGGTGCTGGCGAATCACGCACGGGAAACCCTCAAGCTGGATGAACA AGTGGATTTGGTGATCTGGCCGGAGAATTCCTCTGACGTCAACCCATTTTCCGATGCACAGGCCAGAGCCATTATCGATG GAGCAGTAGAACATGTTCAGGCACCTATTTTGGTGGGCACGATCACCGTCGATGAGGTTGGTCCGCGCAACACCATGCAA GTATTTGATCCTGTTGAAGGCGCCACGGAGTACCACAATAAGAAGTTCTTGCAGCCGTTTGGTGAGTACATGCCGTTTCG CGAATTCCTGAGAATTTTCTCGCCTTACGTTGATTCCGCTGGAAACTTCCAACCCGGTGATGGCACCGGCGTGGTGGAGA TGAATGCTGCGAACCTGGGCCGTGCTGTGACAGTGGGCGTGATGACGTGTTACGAGGTTATCTTCGACCGCGCTGGCCGC GACGCCATCGCCAATGGGGCTGAATTTTTGACCACGCCCACCAACAACGCCACCTTCGGATTCACGGACATGACGTATCA GCAATTAGCTATGAGCCGGATGCGCGCCATCGAATTTGATAGGGCAGTGGTTGTTGCAGCTACATCGGGTGTTTCGGCTA TCGTCAACCCTGATGGAAGCATTTCCCAAAACACCCGAATTTTTGAGGCCGCCACCTTGACGGAATCCATTCCACTCAAG GACACTGTCACCATCGCAGCGCGGGTTGGTTTCTATGTTGAATTACTGTTGGTTATCATTGGTGTATTAGCTGGACTATT CGCCATTCGAATGAATAGCCGTTCAAAGTCTGCGAAAGGTTCCGCTCGGCCCGCACAAGTTCGGGTTAAGAAGGTGCCTG CGAAAAAGGCAGCAACTAATCGTCGAAAAGCAAAATAA
Upstream 100 bases:
>100_bases GCCGATCGTGATCGATGAAGACGAGATCCAAGCCTGGACTTCTGATCTCAAGCCTGAAGATTTCACCAAAGGTAAAGATG AATCCGACGGTGAGAAATAA
Downstream 100 bases:
>100_bases AAACGTCCCGAAGGGACGAGGAGGACAACACCATGAGCAGTGAGGCAGTAGATGCTACGACGCTGGTGATTATTCCAACG TACAACGAGCTGGAAAACCT
Product: hypothetical protein
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 545; Mature: 544
Protein sequence:
>545_residues MTLFIRLALAAVGGLFVFASNEPIGWFVAGIVGTALFFISLAPWDLGVPQKRRKKNEPVPFLQQMSTGPTVVQGMLLGFV HGLVTYLLLLPWIGEFVGSLPYVALSVVEALYSIALGAFGVLIARWRDWKVLLFPAMYVAVEYLRSSWPFDGFAWVRLAW GQINGPLANLAALGGVAFVTFSTVLAAVGVAMVIISKKRLAGAIITASVIAIGAVSSLYVDRNGTSDESIEVAAIQGNVP RMGLDFNAQRRAVLANHARETLKLDEQVDLVIWPENSSDVNPFSDAQARAIIDGAVEHVQAPILVGTITVDEVGPRNTMQ VFDPVEGATEYHNKKFLQPFGEYMPFREFLRIFSPYVDSAGNFQPGDGTGVVEMNAANLGRAVTVGVMTCYEVIFDRAGR DAIANGAEFLTTPTNNATFGFTDMTYQQLAMSRMRAIEFDRAVVVAATSGVSAIVNPDGSISQNTRIFEAATLTESIPLK DTVTIAARVGFYVELLLVIIGVLAGLFAIRMNSRSKSAKGSARPAQVRVKKVPAKKAATNRRKAK
Sequences:
>Translated_545_residues MTLFIRLALAAVGGLFVFASNEPIGWFVAGIVGTALFFISLAPWDLGVPQKRRKKNEPVPFLQQMSTGPTVVQGMLLGFV HGLVTYLLLLPWIGEFVGSLPYVALSVVEALYSIALGAFGVLIARWRDWKVLLFPAMYVAVEYLRSSWPFDGFAWVRLAW GQINGPLANLAALGGVAFVTFSTVLAAVGVAMVIISKKRLAGAIITASVIAIGAVSSLYVDRNGTSDESIEVAAIQGNVP RMGLDFNAQRRAVLANHARETLKLDEQVDLVIWPENSSDVNPFSDAQARAIIDGAVEHVQAPILVGTITVDEVGPRNTMQ VFDPVEGATEYHNKKFLQPFGEYMPFREFLRIFSPYVDSAGNFQPGDGTGVVEMNAANLGRAVTVGVMTCYEVIFDRAGR DAIANGAEFLTTPTNNATFGFTDMTYQQLAMSRMRAIEFDRAVVVAATSGVSAIVNPDGSISQNTRIFEAATLTESIPLK DTVTIAARVGFYVELLLVIIGVLAGLFAIRMNSRSKSAKGSARPAQVRVKKVPAKKAATNRRKAK >Mature_544_residues TLFIRLALAAVGGLFVFASNEPIGWFVAGIVGTALFFISLAPWDLGVPQKRRKKNEPVPFLQQMSTGPTVVQGMLLGFVH GLVTYLLLLPWIGEFVGSLPYVALSVVEALYSIALGAFGVLIARWRDWKVLLFPAMYVAVEYLRSSWPFDGFAWVRLAWG QINGPLANLAALGGVAFVTFSTVLAAVGVAMVIISKKRLAGAIITASVIAIGAVSSLYVDRNGTSDESIEVAAIQGNVPR MGLDFNAQRRAVLANHARETLKLDEQVDLVIWPENSSDVNPFSDAQARAIIDGAVEHVQAPILVGTITVDEVGPRNTMQV FDPVEGATEYHNKKFLQPFGEYMPFREFLRIFSPYVDSAGNFQPGDGTGVVEMNAANLGRAVTVGVMTCYEVIFDRAGRD AIANGAEFLTTPTNNATFGFTDMTYQQLAMSRMRAIEFDRAVVVAATSGVSAIVNPDGSISQNTRIFEAATLTESIPLKD TVTIAARVGFYVELLLVIIGVLAGLFAIRMNSRSKSAKGSARPAQVRVKKVPAKKAATNRRKAK
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=406, Percent_Identity=26.3546798029557, Blast_Score=135, Evalue=7e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 58859; Mature: 58728
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFIRLALAAVGGLFVFASNEPIGWFVAGIVGTALFFISLAPWDLGVPQKRRKKNEPVP CEEHHEEHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCC FLQQMSTGPTVVQGMLLGFVHGLVTYLLLLPWIGEFVGSLPYVALSVVEALYSIALGAFG HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VLIARWRDWKVLLFPAMYVAVEYLRSSWPFDGFAWVRLAWGQINGPLANLAALGGVAFVT HHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH FSTVLAAVGVAMVIISKKRLAGAIITASVIAIGAVSSLYVDRNGTSDESIEVAAIQGNVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEEECCCC RMGLDFNAQRRAVLANHARETLKLDEQVDLVIWPENSSDVNPFSDAQARAIIDGAVEHVQ CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC APILVGTITVDEVGPRNTMQVFDPVEGATEYHNKKFLQPFGEYMPFREFLRIFSPYVDSA CCEEEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC GNFQPGDGTGVVEMNAANLGRAVTVGVMTCYEVIFDRAGRDAIANGAEFLTTPTNNATFG CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEEECCCCCCEEC FTDMTYQQLAMSRMRAIEFDRAVVVAATSGVSAIVNPDGSISQNTRIFEAATLTESIPLK CCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCCCCCEEEEEHHHHCCCCCC DTVTIAARVGFYVELLLVIIGVLAGLFAIRMNSRSKSAKGSARPAQVRVKKVPAKKAATN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEECCCCHHHHCC RRKAK CCCCC >Mature Secondary Structure TLFIRLALAAVGGLFVFASNEPIGWFVAGIVGTALFFISLAPWDLGVPQKRRKKNEPVP EEHHEEHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCC FLQQMSTGPTVVQGMLLGFVHGLVTYLLLLPWIGEFVGSLPYVALSVVEALYSIALGAFG HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH VLIARWRDWKVLLFPAMYVAVEYLRSSWPFDGFAWVRLAWGQINGPLANLAALGGVAFVT HHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH FSTVLAAVGVAMVIISKKRLAGAIITASVIAIGAVSSLYVDRNGTSDESIEVAAIQGNVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEEECCCC RMGLDFNAQRRAVLANHARETLKLDEQVDLVIWPENSSDVNPFSDAQARAIIDGAVEHVQ CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC APILVGTITVDEVGPRNTMQVFDPVEGATEYHNKKFLQPFGEYMPFREFLRIFSPYVDSA CCEEEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC GNFQPGDGTGVVEMNAANLGRAVTVGVMTCYEVIFDRAGRDAIANGAEFLTTPTNNATFG CCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEEECCCCCCEEC FTDMTYQQLAMSRMRAIEFDRAVVVAATSGVSAIVNPDGSISQNTRIFEAATLTESIPLK CCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCCCCCEEEEEHHHHCCCCCC DTVTIAARVGFYVELLLVIIGVLAGLFAIRMNSRSKSAKGSARPAQVRVKKVPAKKAATN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEEECCCCHHHHCC RRKAK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]