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The map label for this gene is 145295575

Identifier: 145295575

GI number: 145295575

Start: 1664536

End: 1665294

Strand: Direct

Name: 145295575

Synonym: cgR_1502

Alternate gene names: NA

Gene position: 1664536-1665294 (Clockwise)

Preceding gene: 145295574

Following gene: 145295576

Centisome position: 50.22

GC content: 54.55

Gene sequence:

>759_bases
GTGAGTGCACTCCGTAAAACATCCCCAAACGGCTCCATCGGCGCATCCGCCACCAGAACCGTTCCGGTGAAACCAACCAA
GACCATGTCAATTGGTGTGGTACTTGAACGTCTAAACGCAGAGTTCCCCGATGTCACTGTGTCCAAAATTCGCTTCCTCG
AATCAGAGGGGCTGATCACCCCTGAGCGAACCGCATCTGGATACCGCCGTTTTACGGAATCAGATGTGGAACGCCTCCGC
TACATCCTGGTCACCCAGCGTGACAACTACCTTCCGCTGAAGGTCATCAGGGAACAGCTGGAAGCCATGGACAACGGCTC
TGTCACCGCCATCCTTGGTTCCTCCTCGGAGCCTTTGGTCAGCCCGGAGAAGTTTCAGGCACCTGCGATTACTCGCCTCA
CTGACTCTGATGTGGCCGAAAAGGCTGGCGTCAACGTCGAATTGGTTGTTGATTTAGTCAACGCCCGATTGATTAAGCCG
GACGCCGCCGGATTTTTCACCAATGATGACGTGGCGATCGCCAGCACCGCAGCTAGCCTGAAAGCAATGGGCTTTGATCT
CCGTCGACTGAAATCCCTGGGAAATGCGGCATCGCGCCAGGCAGATCTTATTTCCCAAGTGGCATCTCCGATTGCGCAGG
GAAAAAGCGATGTTGCCCGCCAGCAAGCTGAAGAAATGGCACAACAAATGTGCTCCCTAGTTGTGTCAATGCACGCCTCC
TTGGTGAAAAACGCAACTCGCGAGCAGCTTGGATACTGA

Upstream 100 bases:

>100_bases
ATACATACCTATCTTGCAACCGTTTTGCGTATAGAATGCCTAAAATAGTGGTACATGTCCCTGTCCGCCCATTTAATTCA
CAGCAGGTAGCAGCAACATC

Downstream 100 bases:

>100_bases
TAGAAAAAATGAGTTTTGTTGAACTTGAATTCCATGGCATTCACACCATGGAACCAGATGGCTTTACCTGCGCGCTGTTC
CGATGGGATGAAGGGAACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSALRKTSPNGSIGASATRTVPVKPTKTMSIGVVLERLNAEFPDVTVSKIRFLESEGLITPERTASGYRRFTESDVERLR
YILVTQRDNYLPLKVIREQLEAMDNGSVTAILGSSSEPLVSPEKFQAPAITRLTDSDVAEKAGVNVELVVDLVNARLIKP
DAAGFFTNDDVAIASTAASLKAMGFDLRRLKSLGNAASRQADLISQVASPIAQGKSDVARQQAEEMAQQMCSLVVSMHAS
LVKNATREQLGY

Sequences:

>Translated_252_residues
MSALRKTSPNGSIGASATRTVPVKPTKTMSIGVVLERLNAEFPDVTVSKIRFLESEGLITPERTASGYRRFTESDVERLR
YILVTQRDNYLPLKVIREQLEAMDNGSVTAILGSSSEPLVSPEKFQAPAITRLTDSDVAEKAGVNVELVVDLVNARLIKP
DAAGFFTNDDVAIASTAASLKAMGFDLRRLKSLGNAASRQADLISQVASPIAQGKSDVARQQAEEMAQQMCSLVVSMHAS
LVKNATREQLGY
>Mature_251_residues
SALRKTSPNGSIGASATRTVPVKPTKTMSIGVVLERLNAEFPDVTVSKIRFLESEGLITPERTASGYRRFTESDVERLRY
ILVTQRDNYLPLKVIREQLEAMDNGSVTAILGSSSEPLVSPEKFQAPAITRLTDSDVAEKAGVNVELVVDLVNARLIKPD
AAGFFTNDDVAIASTAASLKAMGFDLRRLKSLGNAASRQADLISQVASPIAQGKSDVARQQAEEMAQQMCSLVVSMHASL
VKNATREQLGY

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: PF00376 MerR [H]

EC number: NA

Molecular weight: Translated: 27227; Mature: 27096

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALRKTSPNGSIGASATRTVPVKPTKTMSIGVVLERLNAEFPDVTVSKIRFLESEGLIT
CCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
PERTASGYRRFTESDVERLRYILVTQRDNYLPLKVIREQLEAMDNGSVTAILGSSSEPLV
CHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
SPEKFQAPAITRLTDSDVAEKAGVNVELVVDLVNARLIKPDAAGFFTNDDVAIASTAASL
CHHHHCCCCHHHCCCHHHHHHHCCCHHHHHHHHHCEEECCCCCCCCCCCCCHHHHHHHHH
KAMGFDLRRLKSLGNAASRQADLISQVASPIAQGKSDVARQQAEEMAQQMCSLVVSMHAS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LVKNATREQLGY
HHHHHHHHHHCC
>Mature Secondary Structure 
SALRKTSPNGSIGASATRTVPVKPTKTMSIGVVLERLNAEFPDVTVSKIRFLESEGLIT
CCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
PERTASGYRRFTESDVERLRYILVTQRDNYLPLKVIREQLEAMDNGSVTAILGSSSEPLV
CHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCC
SPEKFQAPAITRLTDSDVAEKAGVNVELVVDLVNARLIKPDAAGFFTNDDVAIASTAASL
CHHHHCCCCHHHCCCHHHHHHHCCCHHHHHHHHHCEEECCCCCCCCCCCCCHHHHHHHHH
KAMGFDLRRLKSLGNAASRQADLISQVASPIAQGKSDVARQQAEEMAQQMCSLVVSMHAS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LVKNATREQLGY
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]