| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145295565
Identifier: 145295565
GI number: 145295565
Start: 1652294
End: 1653109
Strand: Reverse
Name: 145295565
Synonym: cgR_1492
Alternate gene names: NA
Gene position: 1653109-1652294 (Counterclockwise)
Preceding gene: 145295569
Following gene: 145295564
Centisome position: 49.88
GC content: 54.17
Gene sequence:
>816_bases ATGAATGATCCAGCTCATCCCCCAATTCCACCAGTATCAAAACGAGACGCTCCGGCGTTTAGCGATCTTCAACATCGAGC AACCAGCGCCAGTGCTTTTACCCAAGGCAGCACGACTTATCACGATGTCCGACCTGGATATCCGGCTGAGGCCGTGGAGT TAGCCCGTGGGTTTGGCCGAGTCCTGGATGTCGGTGCAGGTACCGGAAAACTGACCAGTGAGCTAACAGCTGATCAGGTC CTAGCCCTTGACCCAAGCATGGACATGTTGCGGGTGTTTCGCTCCGCGCTTCCGGCGGTTCCCTGCTGGCAAGCGACAGC AGAACACACAGGAATACGTGACAACGTGGTTGATCTGATTACGTGCGCACAAACGTGGCATTGGGTTGACGTGACGGCTG CCTCAGCGGAATTTGATCGGGTGATTGCACCTGAGGGTGCAGTCCTGCTCGTGTGGAATAACCTGGACACCTCCATCGCG TGGGTGCACCGACTCAGCCGCATTATGCATGCCGGCGATGTACTCAAGCCGGGATTCACCCCAGAAACCGCAGCTCCCTG GATAATTGATCGAGAAATTCGCACCACGTGGAATCAGCACCTCACCCCTGAAGAAATCATCCAGCTCGCTCACACGAGGT CCTACTGGTTAAACGCGTCAGAGAAAATCAAAGAGCGTGTTGATCAGAACCTTCGGTGGTATCTCTACGAGCATTTGGGT TTCAGTCCCGACAATCCAGTGGAACTTCCCTATCGCTGTGATGCATTTTTACTTTCACGTTCCGGTACCCTGGCAGGCAG ATCTTCCAATCTTTAG
Upstream 100 bases:
>100_bases GATTTCGTTTGTTGCACAAGGAGATACTGTATCGCATTGAGGAGTTAAGCGATATATCGCTAGTGAAGGTGGTGGTAGCC CGCTAGGATTAACATCTGAT
Downstream 100 bases:
>100_bases GAGCCCTCGCCATGTACCTGTTGAATCCACCAGTCACTGAACCCGAGATCCTCACTGTCAACGAGATTCCGACCGTCGTC GCTGTCTTTGACAACCACCC
Product: SAM-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MNDPAHPPIPPVSKRDAPAFSDLQHRATSASAFTQGSTTYHDVRPGYPAEAVELARGFGRVLDVGAGTGKLTSELTADQV LALDPSMDMLRVFRSALPAVPCWQATAEHTGIRDNVVDLITCAQTWHWVDVTAASAEFDRVIAPEGAVLLVWNNLDTSIA WVHRLSRIMHAGDVLKPGFTPETAAPWIIDREIRTTWNQHLTPEEIIQLAHTRSYWLNASEKIKERVDQNLRWYLYEHLG FSPDNPVELPYRCDAFLLSRSGTLAGRSSNL
Sequences:
>Translated_271_residues MNDPAHPPIPPVSKRDAPAFSDLQHRATSASAFTQGSTTYHDVRPGYPAEAVELARGFGRVLDVGAGTGKLTSELTADQV LALDPSMDMLRVFRSALPAVPCWQATAEHTGIRDNVVDLITCAQTWHWVDVTAASAEFDRVIAPEGAVLLVWNNLDTSIA WVHRLSRIMHAGDVLKPGFTPETAAPWIIDREIRTTWNQHLTPEEIIQLAHTRSYWLNASEKIKERVDQNLRWYLYEHLG FSPDNPVELPYRCDAFLLSRSGTLAGRSSNL >Mature_271_residues MNDPAHPPIPPVSKRDAPAFSDLQHRATSASAFTQGSTTYHDVRPGYPAEAVELARGFGRVLDVGAGTGKLTSELTADQV LALDPSMDMLRVFRSALPAVPCWQATAEHTGIRDNVVDLITCAQTWHWVDVTAASAEFDRVIAPEGAVLLVWNNLDTSIA WVHRLSRIMHAGDVLKPGFTPETAAPWIIDREIRTTWNQHLTPEEIIQLAHTRSYWLNASEKIKERVDQNLRWYLYEHLG FSPDNPVELPYRCDAFLLSRSGTLAGRSSNL
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 30145; Mature: 30145
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDPAHPPIPPVSKRDAPAFSDLQHRATSASAFTQGSTTYHDVRPGYPAEAVELARGFGR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHH VLDVGAGTGKLTSELTADQVLALDPSMDMLRVFRSALPAVPCWQATAEHTGIRDNVVDLI HEECCCCCCCHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHH TCAQTWHWVDVTAASAEFDRVIAPEGAVLLVWNNLDTSIAWVHRLSRIMHAGDVLKPGFT HHHHCCEEEEEEECCCCHHHEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC PETAAPWIIDREIRTTWNQHLTPEEIIQLAHTRSYWLNASEKIKERVDQNLRWYLYEHLG CCCCCCEEECHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCC FSPDNPVELPYRCDAFLLSRSGTLAGRSSNL CCCCCCCCCCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MNDPAHPPIPPVSKRDAPAFSDLQHRATSASAFTQGSTTYHDVRPGYPAEAVELARGFGR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHH VLDVGAGTGKLTSELTADQVLALDPSMDMLRVFRSALPAVPCWQATAEHTGIRDNVVDLI HEECCCCCCCHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHH TCAQTWHWVDVTAASAEFDRVIAPEGAVLLVWNNLDTSIAWVHRLSRIMHAGDVLKPGFT HHHHCCEEEEEEECCCCHHHEECCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCC PETAAPWIIDREIRTTWNQHLTPEEIIQLAHTRSYWLNASEKIKERVDQNLRWYLYEHLG CCCCCCEEECHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCC FSPDNPVELPYRCDAFLLSRSGTLAGRSSNL CCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]