| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145295549
Identifier: 145295549
GI number: 145295549
Start: 1635323
End: 1636516
Strand: Direct
Name: 145295549
Synonym: cgR_1476
Alternate gene names: NA
Gene position: 1635323-1636516 (Clockwise)
Preceding gene: 145295548
Following gene: 145295550
Centisome position: 49.34
GC content: 56.78
Gene sequence:
>1194_bases ATGGGCTGCATGAGTCTGTTCAACCGCAAAGCCGACCTGCCCGGCCTGCAAGGTGTCACCCGAATCTGCACCCCGCAGGG CAAAGGGCTAAAGCGCCTGTCCGAAGGCGATCTCGCAATCATTGATGCACCAGATCTATCCAGGACCTTCGCCCAACGAT TGCTAGCAGCAAAACCCGCCGCAGTCCTCAACGTTTCCCGGTTCACCACCGGATCGGTGCCCAACTTCGGACCGCAAATG CTTATCGACGGCGGCATCCAGCTCGTGGAAGGCTTTGGCCAGGAGCTGCTCGACGGCACCAAAGACGGTAAGAAAGGTCG CCTGACAGAAGATGGACAGCTCTTCTACGGCGAACGACTGATCTCTAACGGCAGTGTCCTCAGTGGACCTGCGGCTGAAA ATGCATTTGCAGACGCCCAGCAATCACTGTTGGACCGCATGGAAGCCTATTTCGGCAACACCATTCAGTTCATTCACTCA GAAGCGCCGCTCCTGATCGATGGCCTCGGCATTCCCGATACCGGAAATGCCATTGAAGGCCGCAAAGTTCTCATTGCCTC ACCAGGGGATAACCACCGCAGCAGGCTCAAAGAACTCCGCAGCTTCATCCGCGAATACGATCCAGTACTCATCGGTGTCG ATGGGGCAGCAGACACCTTGGTGGAATTGGGATACAAGCCCGCGCTGATCGTCGGCAATCCCACTGGCATCGGCGCAGAT GCGCTGCGCAGTGGCGCCAACGTAATTTTGCCAGCTGATCCAGACGGCCACGCTGTTGGTCTGGAGCGCATCCAGGATCT TGGCATCGGTGCGATGACCTTCCCATCCTCAGTAAATTCCTCCACGGATCTGGCGCTCCTGCTTGCGGATTTCCACAACC CGCAGATGATCGTCAATGTCGGCGGTCCTGTCACGCTTGATGGTGTTTTTGAAAACCGCGAGGATTCCGATCCCGCAGCG TTGTTGACGCGCGCCAAGCTAGGCACCAAGCTTGTCGACGGATCCGTCATCGCAAGCCTTTACACAGTGCGCAGCTCCAG CAACCTTGGATGGATGTGGGCGCTGTTAGCCACTTTGGTGGTTCTTTCAGTCGTGATTGTTATCGCTGGCACCGCAGGAT CAGGCTCTTTTACCGACAACCTCATTGACACCTGGAACAGCTTCGCGCTGACAGTCCAGGGTTGGTTCAAATAG
Upstream 100 bases:
>100_bases ACGAGGAGCGAGTAGAACCACTTCTCGCCGCCAGTGCATAAGAGTTTTCTCGGATTTTTTTAGGCGCGCCTCCACCAAAG GTTGAGACTTTGGTTCCACA
Downstream 100 bases:
>100_bases GAAGGCAACATGGCTAAACGACGTGGAAGAGGCGCCGCAACCTTCGCCGCACTGGGATTTGGTGCAGCAGCCGGCATTGC CTTTGGAACTTATGTGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Membrane-Anchored Protein; Thiamin Pyrophosphokinase Catalytic Subunit; Pyrophosphokinase; Thiamine Pyrophosphokinase-Like
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MGCMSLFNRKADLPGLQGVTRICTPQGKGLKRLSEGDLAIIDAPDLSRTFAQRLLAAKPAAVLNVSRFTTGSVPNFGPQM LIDGGIQLVEGFGQELLDGTKDGKKGRLTEDGQLFYGERLISNGSVLSGPAAENAFADAQQSLLDRMEAYFGNTIQFIHS EAPLLIDGLGIPDTGNAIEGRKVLIASPGDNHRSRLKELRSFIREYDPVLIGVDGAADTLVELGYKPALIVGNPTGIGAD ALRSGANVILPADPDGHAVGLERIQDLGIGAMTFPSSVNSSTDLALLLADFHNPQMIVNVGGPVTLDGVFENREDSDPAA LLTRAKLGTKLVDGSVIASLYTVRSSSNLGWMWALLATLVVLSVVIVIAGTAGSGSFTDNLIDTWNSFALTVQGWFK
Sequences:
>Translated_397_residues MGCMSLFNRKADLPGLQGVTRICTPQGKGLKRLSEGDLAIIDAPDLSRTFAQRLLAAKPAAVLNVSRFTTGSVPNFGPQM LIDGGIQLVEGFGQELLDGTKDGKKGRLTEDGQLFYGERLISNGSVLSGPAAENAFADAQQSLLDRMEAYFGNTIQFIHS EAPLLIDGLGIPDTGNAIEGRKVLIASPGDNHRSRLKELRSFIREYDPVLIGVDGAADTLVELGYKPALIVGNPTGIGAD ALRSGANVILPADPDGHAVGLERIQDLGIGAMTFPSSVNSSTDLALLLADFHNPQMIVNVGGPVTLDGVFENREDSDPAA LLTRAKLGTKLVDGSVIASLYTVRSSSNLGWMWALLATLVVLSVVIVIAGTAGSGSFTDNLIDTWNSFALTVQGWFK >Mature_396_residues GCMSLFNRKADLPGLQGVTRICTPQGKGLKRLSEGDLAIIDAPDLSRTFAQRLLAAKPAAVLNVSRFTTGSVPNFGPQML IDGGIQLVEGFGQELLDGTKDGKKGRLTEDGQLFYGERLISNGSVLSGPAAENAFADAQQSLLDRMEAYFGNTIQFIHSE APLLIDGLGIPDTGNAIEGRKVLIASPGDNHRSRLKELRSFIREYDPVLIGVDGAADTLVELGYKPALIVGNPTGIGADA LRSGANVILPADPDGHAVGLERIQDLGIGAMTFPSSVNSSTDLALLLADFHNPQMIVNVGGPVTLDGVFENREDSDPAAL LTRAKLGTKLVDGSVIASLYTVRSSSNLGWMWALLATLVVLSVVIVIAGTAGSGSFTDNLIDTWNSFALTVQGWFK
Specific function: Unknown
COG id: COG4825
COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41931; Mature: 41800
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCMSLFNRKADLPGLQGVTRICTPQGKGLKRLSEGDLAIIDAPDLSRTFAQRLLAAKPA CCCHHHHCCCCCCCCCCCHHHHCCCCCCCCHHCCCCCEEEEECCCHHHHHHHHHHHCCCH AVLNVSRFTTGSVPNFGPQMLIDGGIQLVEGFGQELLDGTKDGKKGRLTEDGQLFYGERL HHEEEHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHH ISNGSVLSGPAAENAFADAQQSLLDRMEAYFGNTIQFIHSEAPLLIDGLGIPDTGNAIEG HCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHCCCCCEEEECCCCCCCCCCCCC RKVLIASPGDNHRSRLKELRSFIREYDPVLIGVDGAADTLVELGYKPALIVGNPTGIGAD CEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCEEEEECCCCCCHH ALRSGANVILPADPDGHAVGLERIQDLGIGAMTFPSSVNSSTDLALLLADFHNPQMIVNV HHHCCCCEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEECCCCEEEEEC GGPVTLDGVFENREDSDPAALLTRAKLGTKLVDGSVIASLYTVRSSSNLGWMWALLATLV CCCEEECCCCCCCCCCCHHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHH VLSVVIVIAGTAGSGSFTDNLIDTWNSFALTVQGWFK HHHHHHHHCCCCCCCCCCHHHHHCCCCEEEEEEECCC >Mature Secondary Structure GCMSLFNRKADLPGLQGVTRICTPQGKGLKRLSEGDLAIIDAPDLSRTFAQRLLAAKPA CCHHHHCCCCCCCCCCCHHHHCCCCCCCCHHCCCCCEEEEECCCHHHHHHHHHHHCCCH AVLNVSRFTTGSVPNFGPQMLIDGGIQLVEGFGQELLDGTKDGKKGRLTEDGQLFYGERL HHEEEHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHH ISNGSVLSGPAAENAFADAQQSLLDRMEAYFGNTIQFIHSEAPLLIDGLGIPDTGNAIEG HCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHCCCCCEEEECCCCCCCCCCCCC RKVLIASPGDNHRSRLKELRSFIREYDPVLIGVDGAADTLVELGYKPALIVGNPTGIGAD CEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCEEEEECCCCCCHH ALRSGANVILPADPDGHAVGLERIQDLGIGAMTFPSSVNSSTDLALLLADFHNPQMIVNV HHHCCCCEEEECCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEEECCCCEEEEEC GGPVTLDGVFENREDSDPAALLTRAKLGTKLVDGSVIASLYTVRSSSNLGWMWALLATLV CCCEEECCCCCCCCCCCHHHHHHHHHHCCHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHH VLSVVIVIAGTAGSGSFTDNLIDTWNSFALTVQGWFK HHHHHHHHCCCCCCCCCCHHHHHCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA