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The map label for this gene is nagD [H]

Identifier: 145295544

GI number: 145295544

Start: 1630421

End: 1631407

Strand: Direct

Name: nagD [H]

Synonym: cgR_1471

Alternate gene names: 145295544

Gene position: 1630421-1631407 (Clockwise)

Preceding gene: 145295543

Following gene: 145295545

Centisome position: 49.2

GC content: 56.94

Gene sequence:

>987_bases
ATGAGTGTAATCACGGAATATGACAGCCTTCTTCTTGATCTAGATGGAACCGTTTACGAGGGCGGCCGAGCCATTGAGCA
CGTAGTTTCTGCGCTCTCTGGCGCCGGCCTACCTGTCATTTATGTCACCAATAATGCCTCCCGCGCTCCGGAGGTGGTGG
CTGCGCAACTCCGTGAGATCGGCCTTGCCGACACCACTGCGGCCAATGTGATGACATCTGCTCAAGCTGCCTGCAAGATG
GCGGCGGAGAAGATTCCCGCTGGATCCAAGGTGTATGTTTTGGGTTCAGAATCCTTCCGCGAGCTAGCTACTGAAGCTGG
TTTTGTGGTGGTTGATTCGGCTGATGATAAACCTGTGGCTGTGCTTCACGGCCACAACCCTGAGACCGGTTGGGCTCAAT
TGAGCGAGGCTGCGCTGTCAATTAATGCTGGCGCGCAGTATTTTGCATCAAATTTGGATTCCACCCTTCCCATGGAACGC
GGTCGTCACATTGGCAACGGTTCCATGGTGGCTGCCGTGGTCAACGCGACTGGGGTAAAGCCTCTTTCCGCAGGTAAGCC
AGGCCCCGCGATGTTCTATGCGGCGGCTAAAACTCTTAATTCTTCAAAGCCTTTGGCTGTCGGCGATCGTCTCGATACTG
ATATTGCAGGCGGAAACGCTGCAGGCATGGACACATTCCAGGTCCTGACCGGTGTCAGCGGCTACTACGATTTGGTGCGC
GCCATTCCAGAGCAGCGCCCTACCTATATCGCTACCTCAATGCAGGATCTCTACAGCGATCCGGGCGAGCTCAAGCCAGG
TGCCCAGGGCGGTTTTTCAGCGCTTATCGACGGCGACACCCTGGTCATTTCCGGCGGCGATGCCGGCGCAACTCCGGTTG
CAGCACTCCGCACTGCGTTGGATGTGGCCTGGGCGGCCACAGAGCCAGTCACCGAGGTACGCGCTGATTCAGAGGCAGCT
GCTACTGCATTGCAGAGCTGGTGGTAA

Upstream 100 bases:

>100_bases
AGTGGTTCCAGCACGCTGCCACCTTGGATGAGGACGGCTACCTCGATGCAGAGGAGCGTATCGAGCAGCTCGATAAGGGC
AACAACTAGACTATTGGTCT

Downstream 100 bases:

>100_bases
ACGGTGAATTCACCAAAGCCTCATGATCCTCGCGCAGCTCATGTGACCAACCCGGAAGAAATTGCGGGAAAAGTCAATGA
GGTTTTAAGCCGCGAAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSVITEYDSLLLDLDGTVYEGGRAIEHVVSALSGAGLPVIYVTNNASRAPEVVAAQLREIGLADTTAANVMTSAQAACKM
AAEKIPAGSKVYVLGSESFRELATEAGFVVVDSADDKPVAVLHGHNPETGWAQLSEAALSINAGAQYFASNLDSTLPMER
GRHIGNGSMVAAVVNATGVKPLSAGKPGPAMFYAAAKTLNSSKPLAVGDRLDTDIAGGNAAGMDTFQVLTGVSGYYDLVR
AIPEQRPTYIATSMQDLYSDPGELKPGAQGGFSALIDGDTLVISGGDAGATPVAALRTALDVAWAATEPVTEVRADSEAA
ATALQSWW

Sequences:

>Translated_328_residues
MSVITEYDSLLLDLDGTVYEGGRAIEHVVSALSGAGLPVIYVTNNASRAPEVVAAQLREIGLADTTAANVMTSAQAACKM
AAEKIPAGSKVYVLGSESFRELATEAGFVVVDSADDKPVAVLHGHNPETGWAQLSEAALSINAGAQYFASNLDSTLPMER
GRHIGNGSMVAAVVNATGVKPLSAGKPGPAMFYAAAKTLNSSKPLAVGDRLDTDIAGGNAAGMDTFQVLTGVSGYYDLVR
AIPEQRPTYIATSMQDLYSDPGELKPGAQGGFSALIDGDTLVISGGDAGATPVAALRTALDVAWAATEPVTEVRADSEAA
ATALQSWW
>Mature_327_residues
SVITEYDSLLLDLDGTVYEGGRAIEHVVSALSGAGLPVIYVTNNASRAPEVVAAQLREIGLADTTAANVMTSAQAACKMA
AEKIPAGSKVYVLGSESFRELATEAGFVVVDSADDKPVAVLHGHNPETGWAQLSEAALSINAGAQYFASNLDSTLPMERG
RHIGNGSMVAAVVNATGVKPLSAGKPGPAMFYAAAKTLNSSKPLAVGDRLDTDIAGGNAAGMDTFQVLTGVSGYYDLVRA
IPEQRPTYIATSMQDLYSDPGELKPGAQGGFSALIDGDTLVISGGDAGATPVAALRTALDVAWAATEPVTEVRADSEAAA
TALQSWW

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. NagD family [H]

Homologues:

Organism=Homo sapiens, GI10092677, Length=283, Percent_Identity=31.4487632508834, Blast_Score=113, Evalue=2e-25,
Organism=Homo sapiens, GI108796653, Length=304, Percent_Identity=29.2763157894737, Blast_Score=86, Evalue=3e-17,
Organism=Escherichia coli, GI1786890, Length=254, Percent_Identity=29.5275590551181, Blast_Score=96, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17562458, Length=287, Percent_Identity=25.0871080139373, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17560956, Length=287, Percent_Identity=25.0871080139373, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17558880, Length=284, Percent_Identity=25.3521126760563, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI193210059, Length=270, Percent_Identity=26.6666666666667, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI86563050, Length=251, Percent_Identity=26.6932270916335, Blast_Score=71, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6319965, Length=242, Percent_Identity=25.2066115702479, Blast_Score=78, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24666141, Length=265, Percent_Identity=27.5471698113208, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI221329670, Length=285, Percent_Identity=25.9649122807018, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24641437, Length=250, Percent_Identity=25.2, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24656330, Length=276, Percent_Identity=25, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24656326, Length=271, Percent_Identity=25.4612546125461, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR006354
- InterPro:   IPR023215 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 33733; Mature: 33602

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVITEYDSLLLDLDGTVYEGGRAIEHVVSALSGAGLPVIYVTNNASRAPEVVAAQLREI
CCCHHCCCCEEEECCCCEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHC
GLADTTAANVMTSAQAACKMAAEKIPAGSKVYVLGSESFRELATEAGFVVVDSADDKPVA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCEEEEECCCCCCEE
VLHGHNPETGWAQLSEAALSINAGAQYFASNLDSTLPMERGRHIGNGSMVAAVVNATGVK
EEECCCCCHHHHHHHHHHEEECCCHHHHHHCCCCCCCHHHCCCCCCCCEEEEEECCCCCC
PLSAGKPGPAMFYAAAKTLNSSKPLAVGDRLDTDIAGGNAAGMDTFQVLTGVSGYYDLVR
CCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHH
AIPEQRPTYIATSMQDLYSDPGELKPGAQGGFSALIDGDTLVISGGDAGATPVAALRTAL
HHHCCCCCEEHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHH
DVAWAATEPVTEVRADSEAAATALQSWW
HHHHHCCCCHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure 
SVITEYDSLLLDLDGTVYEGGRAIEHVVSALSGAGLPVIYVTNNASRAPEVVAAQLREI
CCHHCCCCEEEECCCCEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHC
GLADTTAANVMTSAQAACKMAAEKIPAGSKVYVLGSESFRELATEAGFVVVDSADDKPVA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCEEEEECCCCCCEE
VLHGHNPETGWAQLSEAALSINAGAQYFASNLDSTLPMERGRHIGNGSMVAAVVNATGVK
EEECCCCCHHHHHHHHHHEEECCCHHHHHHCCCCCCCHHHCCCCCCCCEEEEEECCCCCC
PLSAGKPGPAMFYAAAKTLNSSKPLAVGDRLDTDIAGGNAAGMDTFQVLTGVSGYYDLVR
CCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHH
AIPEQRPTYIATSMQDLYSDPGELKPGAQGGFSALIDGDTLVISGGDAGATPVAALRTAL
HHHCCCCCEEHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHH
DVAWAATEPVTEVRADSEAAATALQSWW
HHHHHCCCCHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA