| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is pheT [H]
Identifier: 145295525
GI number: 145295525
Start: 1604046
End: 1606553
Strand: Direct
Name: pheT [H]
Synonym: cgR_1453
Alternate gene names: 145295525
Gene position: 1604046-1606553 (Clockwise)
Preceding gene: 145295524
Following gene: 145295526
Centisome position: 48.4
GC content: 58.93
Gene sequence:
>2508_bases ATGTTGATTGCACAAAACTGGGTGACGGGACTGCTGGGCCACGCAAACGAAGGCTGGAAGGTGCCATCGTCTGATTTGGA CTCAGGTTATGTCCGCGTCGGCTTCGAAACCGAAGGCTACTGGCCAATCCCTGAAACCACCGGACCACTCGTTTTCGGCC GCGTGGAAACCATCGAAGAGCTCACCGAGTTCAAGAAGCCCATCCGCCACTGCCACGTCAATGTTGGCGACGCCAACGGA ACCGGCGAACTGCAGTCCATCGTTTGTGGCGCCCGCAACTTCAAGGAAGGCGACACCGTTGTCGTGTCCCTTCCTGGCGC TGTGCTGCCTGGCGATTTCGCGATCTCTGCTCGTGAAACTTACGGACGCATGTCTGCAGGCATGATCTGTTCTGCCTCTG AGCTGGGTCTTGCTGATAAGCAGAACTCCGGCATCATCACCCTGGATCCTTCTTACGGCGAGCCTGGCGAAGACGCACGT CAAGCACTGGGACTTGAAGATACCGTTTTCGATGTCAACGTCACCCCAGACCGCGGTTACGCACTGTCTGCTCGTGGCCT GACCCGCGAACTGGCATCGGCTTTCAGCCTGACCTTCACCGACCCTGCGATCGAGCCAGGTGTAGCAGGCATTGAGGTCA AGGTCCCAGCAGTTGAAGGTTCCTTGATTAACGTGGAGCTGCGTGAAGAGACCAAGGCAATCCGTTTCGGTCTGCGTAAA GTCTCTGGCATTGATCCAGCAGCAGAATCCCCATTCTGGATGCAGCGTGAACTCATGCTCTCTGGTCAGCGACCAGTCAA CGCCGCCACCGACGTCACCAACTACGTCATGTTGCTGCTCGGCCAGCCGATGCATGCTTTCGACGCAGCCAAGGTTACTG GCGATCTTGTTGTCCGCAACGCAACTGCAGGCGAGAAGTTCGAAACCCTCGATCACGTCAAGCGCACCCTCAATGAGGAA GACGTTGTGATCACCGATGACAACGGCATTCAGTCTTTGGCTGGCGTTATGGGTGGTCTCACCTCCGAGATCTCTGACAC CACCACCGATGTCTACTTCGAGGCCGCAACCTGGGACACCATCACCGTTGCGCGCACCTCACGTCGTCACAAGTTGAGCT CCGAAGCTTCTCGACGTTTCGAGCGTGGCGTTGACCCTGCGATCGTGGAAATCGCCCTCGATATCGCAGCAACCCTTCTC GTGGAGATCGCAGGCGGCACCGTCGATGCGGGTCGCACCCTCGTTGGTGATGTCCCTGCCATGCACCCCATCACCATGAA GGTCACTCGACCTTCCGAGCTCGCAGGCGTGGATTATTCCGCAGAAACTGTGATCGCTCGTCTGGAAGAGGTCGGATGCA CCGTCGCTGTTTCCGGCGACACCTTGGAAGTAACCCCTCCAACCTGGCGCGGTGACCTCACCATGTCCGCTGACCTCGTG GAAGAAGTACTCCGCCTCGAAGGTTTGGAAGCAATTCCAACCATCATCCCAACCGCACCAGCAGGCCGTGGACTAACCGA TGCACAGAAGCGCCGCCGCGCCGTTGGCCACGCTTTGGCTTACGCTGGCTACGCCGAAATCATCCCAAGCCCATTCATGG ACCCAGAGGTCTTCGATGTATGGGGACTCGCAGCAGACGACGAGCGCCGCAAGACCGTTTCCGTTCTCAACCCACTTGAG GCAGAACGCAACGTCCTGAGCACCTCCTTGCTGCCCTCCATGCTCGATGCTGTCAAGCGCAACGTTGCACGTGGACACAA CGATTTCTCCCTGTTCGGCCTGCAGCAGGTCGCCTTCGAGCACGGATCCGGCGTTTCCCCAATGCCATCTGTTGCTTCAC GCCCTGAAGAGTCTGTCGTGGCAGAACTGGTGGATTCACTGCCAAACCAGCCACTGCATGTCGCAACCGTGGGCACCGGC AACATCGAGTTCGAAGGCCCATGGGGCAAGGGCCGCGCCTACACCTTCGCCGACGCGATTGAATCCGCGCGCGCAGTCGC CCGCGCTGCTGGCGTCACCTTGGAGCTGGCCAACGCCGACGCGCTTCCTTGGCACCCAGGTCGTTGCGCCGCATTGCTTA TCGACGGTACCCCCGTCGGTTACGCTGGCGAACTTCACCCACAGGTCCTGGAAAAGGCCGGTCTACCAGCACGCACCTGT GCAATGGAACTGGATCTCAGCGCACTGCCACTGGTAGAAAACCTCCCAGCGCCAGTCCTGTCCTCCTTCCCAGCACTGCA CCAAGACATCGCCCTAGTTGTGGATGAAACCATCCCGGCCGAAGATGTCCGCGCAGTTGTCGAAGCCGGCGCCGGCGAAC TTATCGAAACGGTCGAGCTTTTCGACGTCTACCGCTCCGAACAGCTCGGCGAGAACAAGAAATCCCTCGCGTTCTCCCTG CGTTTCCGCGCAACCGACCGCACCCTCACCGATGAGGAAGCCAACGAAGCACGACTTCAGGCAGCAGAGCTAGCAAAGGA GAAATTCAACGCTGAAATGCGTGGCTAG
Upstream 100 bases:
>100_bases GCGCGACATGGTTGAGGGCGATATTCGCTTCACCCTCCCATTCGGCATTCAGGCATAACTCATCCCGCACACGACTTATA TATAGGAGCAAAATTCCACC
Downstream 100 bases:
>100_bases TTTCACATAGGTTCTATAGGCGCCCTGGTGGTTAATCCCACCGGGGCGTCTTTTGCTGTGCTGTGAACTGCGACACCGAC TTCACGTGGTCGACTTGAGT
Product: phenylalanyl-tRNA synthetase subunit beta
Products: NA
Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]
Number of amino acids: Translated: 835; Mature: 835
Protein sequence:
>835_residues MLIAQNWVTGLLGHANEGWKVPSSDLDSGYVRVGFETEGYWPIPETTGPLVFGRVETIEELTEFKKPIRHCHVNVGDANG TGELQSIVCGARNFKEGDTVVVSLPGAVLPGDFAISARETYGRMSAGMICSASELGLADKQNSGIITLDPSYGEPGEDAR QALGLEDTVFDVNVTPDRGYALSARGLTRELASAFSLTFTDPAIEPGVAGIEVKVPAVEGSLINVELREETKAIRFGLRK VSGIDPAAESPFWMQRELMLSGQRPVNAATDVTNYVMLLLGQPMHAFDAAKVTGDLVVRNATAGEKFETLDHVKRTLNEE DVVITDDNGIQSLAGVMGGLTSEISDTTTDVYFEAATWDTITVARTSRRHKLSSEASRRFERGVDPAIVEIALDIAATLL VEIAGGTVDAGRTLVGDVPAMHPITMKVTRPSELAGVDYSAETVIARLEEVGCTVAVSGDTLEVTPPTWRGDLTMSADLV EEVLRLEGLEAIPTIIPTAPAGRGLTDAQKRRRAVGHALAYAGYAEIIPSPFMDPEVFDVWGLAADDERRKTVSVLNPLE AERNVLSTSLLPSMLDAVKRNVARGHNDFSLFGLQQVAFEHGSGVSPMPSVASRPEESVVAELVDSLPNQPLHVATVGTG NIEFEGPWGKGRAYTFADAIESARAVARAAGVTLELANADALPWHPGRCAALLIDGTPVGYAGELHPQVLEKAGLPARTC AMELDLSALPLVENLPAPVLSSFPALHQDIALVVDETIPAEDVRAVVEAGAGELIETVELFDVYRSEQLGENKKSLAFSL RFRATDRTLTDEEANEARLQAAELAKEKFNAEMRG
Sequences:
>Translated_835_residues MLIAQNWVTGLLGHANEGWKVPSSDLDSGYVRVGFETEGYWPIPETTGPLVFGRVETIEELTEFKKPIRHCHVNVGDANG TGELQSIVCGARNFKEGDTVVVSLPGAVLPGDFAISARETYGRMSAGMICSASELGLADKQNSGIITLDPSYGEPGEDAR QALGLEDTVFDVNVTPDRGYALSARGLTRELASAFSLTFTDPAIEPGVAGIEVKVPAVEGSLINVELREETKAIRFGLRK VSGIDPAAESPFWMQRELMLSGQRPVNAATDVTNYVMLLLGQPMHAFDAAKVTGDLVVRNATAGEKFETLDHVKRTLNEE DVVITDDNGIQSLAGVMGGLTSEISDTTTDVYFEAATWDTITVARTSRRHKLSSEASRRFERGVDPAIVEIALDIAATLL VEIAGGTVDAGRTLVGDVPAMHPITMKVTRPSELAGVDYSAETVIARLEEVGCTVAVSGDTLEVTPPTWRGDLTMSADLV EEVLRLEGLEAIPTIIPTAPAGRGLTDAQKRRRAVGHALAYAGYAEIIPSPFMDPEVFDVWGLAADDERRKTVSVLNPLE AERNVLSTSLLPSMLDAVKRNVARGHNDFSLFGLQQVAFEHGSGVSPMPSVASRPEESVVAELVDSLPNQPLHVATVGTG NIEFEGPWGKGRAYTFADAIESARAVARAAGVTLELANADALPWHPGRCAALLIDGTPVGYAGELHPQVLEKAGLPARTC AMELDLSALPLVENLPAPVLSSFPALHQDIALVVDETIPAEDVRAVVEAGAGELIETVELFDVYRSEQLGENKKSLAFSL RFRATDRTLTDEEANEARLQAAELAKEKFNAEMRG >Mature_835_residues MLIAQNWVTGLLGHANEGWKVPSSDLDSGYVRVGFETEGYWPIPETTGPLVFGRVETIEELTEFKKPIRHCHVNVGDANG TGELQSIVCGARNFKEGDTVVVSLPGAVLPGDFAISARETYGRMSAGMICSASELGLADKQNSGIITLDPSYGEPGEDAR QALGLEDTVFDVNVTPDRGYALSARGLTRELASAFSLTFTDPAIEPGVAGIEVKVPAVEGSLINVELREETKAIRFGLRK VSGIDPAAESPFWMQRELMLSGQRPVNAATDVTNYVMLLLGQPMHAFDAAKVTGDLVVRNATAGEKFETLDHVKRTLNEE DVVITDDNGIQSLAGVMGGLTSEISDTTTDVYFEAATWDTITVARTSRRHKLSSEASRRFERGVDPAIVEIALDIAATLL VEIAGGTVDAGRTLVGDVPAMHPITMKVTRPSELAGVDYSAETVIARLEEVGCTVAVSGDTLEVTPPTWRGDLTMSADLV EEVLRLEGLEAIPTIIPTAPAGRGLTDAQKRRRAVGHALAYAGYAEIIPSPFMDPEVFDVWGLAADDERRKTVSVLNPLE AERNVLSTSLLPSMLDAVKRNVARGHNDFSLFGLQQVAFEHGSGVSPMPSVASRPEESVVAELVDSLPNQPLHVATVGTG NIEFEGPWGKGRAYTFADAIESARAVARAAGVTLELANADALPWHPGRCAALLIDGTPVGYAGELHPQVLEKAGLPARTC AMELDLSALPLVENLPAPVLSSFPALHQDIALVVDETIPAEDVRAVVEAGAGELIETVELFDVYRSEQLGENKKSLAFSL RFRATDRTLTDEEANEARLQAAELAKEKFNAEMRG
Specific function: Unknown
COG id: COG0072
COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1788006, Length=776, Percent_Identity=34.4072164948454, Blast_Score=363, Evalue=1e-101,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005146 - InterPro: IPR005147 - InterPro: IPR009061 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR004532 - InterPro: IPR020825 - InterPro: IPR005121 - InterPro: IPR002547 [H]
Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]
EC number: =6.1.1.20 [H]
Molecular weight: Translated: 89418; Mature: 89418
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIAQNWVTGLLGHANEGWKVPSSDLDSGYVRVGFETEGYWPIPETTGPLVFGRVETIEE CEECCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCEEECHHHHHHH LTEFKKPIRHCHVNVGDANGTGELQSIVCGARNFKEGDTVVVSLPGAVLPGDFAISARET HHHHHHHHHHEEEECCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEECHHH YGRMSAGMICSASELGLADKQNSGIITLDPSYGEPGEDARQALGLEDTVFDVNVTPDRGY HCCCCCCEEECHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHCCCCCEEEEEEECCCCCC ALSARGLTRELASAFSLTFTDPAIEPGVAGIEVKVPAVEGSLINVELREETKAIRFGLRK EEECCHHHHHHHHHHEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEHHHHHHHHHHHHH VSGIDPAAESPFWMQRELMLSGQRPVNAATDVTNYVMLLLGQPMHAFDAAKVTGDLVVRN HCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEE ATAGEKFETLDHVKRTLNEEDVVITDDNGIQSLAGVMGGLTSEISDTTTDVYFEAATWDT CCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCHHHHHCCCCCEEEEEECCCCE ITVARTSRRHKLSSEASRRFERGVDPAIVEIALDIAATLLVEIAGGTVDAGRTLVGDVPA EEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC MHPITMKVTRPSELAGVDYSAETVIARLEEVGCTVAVSGDTLEVTPPTWRGDLTMSADLV CCCEEEEEECCHHHCCCCCCHHHHHHHHHHCCEEEEECCCEEEECCCCCCCCCEECHHHH EEVLRLEGLEAIPTIIPTAPAGRGLTDAQKRRRAVGHALAYAGYAEIIPSPFMDPEVFDV HHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHH WGLAADDERRKTVSVLNPLEAERNVLSTSLLPSMLDAVKRNVARGHNDFSLFGLQQVAFE CCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH HGSGVSPMPSVASRPEESVVAELVDSLPNQPLHVATVGTGNIEFEGPWGKGRAYTFADAI CCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCEEEHHHHH ESARAVARAAGVTLELANADALPWHPGRCAALLIDGTPVGYAGELHPQVLEKAGLPARTC HHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCHHHH AMELDLSALPLVENLPAPVLSSFPALHQDIALVVDETIPAEDVRAVVEAGAGELIETVEL EEECCCCCCCHHHCCCCHHHHHCHHHHHCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHH FDVYRSEQLGENKKSLAFSLRFRATDRTLTDEEANEARLQAAELAKEKFNAEMRG HHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLIAQNWVTGLLGHANEGWKVPSSDLDSGYVRVGFETEGYWPIPETTGPLVFGRVETIEE CEECCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCEEECHHHHHHH LTEFKKPIRHCHVNVGDANGTGELQSIVCGARNFKEGDTVVVSLPGAVLPGDFAISARET HHHHHHHHHHEEEECCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEEECHHH YGRMSAGMICSASELGLADKQNSGIITLDPSYGEPGEDARQALGLEDTVFDVNVTPDRGY HCCCCCCEEECHHHCCCCCCCCCCEEEECCCCCCCCHHHHHHCCCCCEEEEEEECCCCCC ALSARGLTRELASAFSLTFTDPAIEPGVAGIEVKVPAVEGSLINVELREETKAIRFGLRK EEECCHHHHHHHHHHEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEHHHHHHHHHHHHH VSGIDPAAESPFWMQRELMLSGQRPVNAATDVTNYVMLLLGQPMHAFDAAKVTGDLVVRN HCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEE ATAGEKFETLDHVKRTLNEEDVVITDDNGIQSLAGVMGGLTSEISDTTTDVYFEAATWDT CCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCHHHHHCCCCCEEEEEECCCCE ITVARTSRRHKLSSEASRRFERGVDPAIVEIALDIAATLLVEIAGGTVDAGRTLVGDVPA EEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCC MHPITMKVTRPSELAGVDYSAETVIARLEEVGCTVAVSGDTLEVTPPTWRGDLTMSADLV CCCEEEEEECCHHHCCCCCCHHHHHHHHHHCCEEEEECCCEEEECCCCCCCCCEECHHHH EEVLRLEGLEAIPTIIPTAPAGRGLTDAQKRRRAVGHALAYAGYAEIIPSPFMDPEVFDV HHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHH WGLAADDERRKTVSVLNPLEAERNVLSTSLLPSMLDAVKRNVARGHNDFSLFGLQQVAFE CCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHH HGSGVSPMPSVASRPEESVVAELVDSLPNQPLHVATVGTGNIEFEGPWGKGRAYTFADAI CCCCCCCCCHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCEEEHHHHH ESARAVARAAGVTLELANADALPWHPGRCAALLIDGTPVGYAGELHPQVLEKAGLPARTC HHHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCHHHH AMELDLSALPLVENLPAPVLSSFPALHQDIALVVDETIPAEDVRAVVEAGAGELIETVEL EEECCCCCCCHHHCCCCHHHHHCHHHHHCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHH FDVYRSEQLGENKKSLAFSLRFRATDRTLTDEEANEARLQAAELAKEKFNAEMRG HHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]