| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is ubiE [H]
Identifier: 145295495
GI number: 145295495
Start: 1563939
End: 1564769
Strand: Reverse
Name: ubiE [H]
Synonym: cgR_1423
Alternate gene names: 145295495
Gene position: 1564769-1563939 (Counterclockwise)
Preceding gene: 145295500
Following gene: 145295494
Centisome position: 47.21
GC content: 56.32
Gene sequence:
>831_bases ATGGGCACAGACGATACTGATGGGACCAATGGGAAAACCTCAAGCCACCAATTGAGCCAGTTCTCTCAAGCAAACCGATA CTGGTGGGATGTGGACGCGGCCGACTATCACGAACGCCACCCTTCTTATTTAGGCACGGATTCCGCTCACGGCGAGTTCT ACTGGTGCCCCGAGATGCTGCATGAAAAAGATGTACGTCTTCTTGGCACTCCCGCAGCACTCTCCGGCAAGAAAATTCTA GAGATCGGTTGCGGCTCAGCACCATGTGCTCGGTGGCTGGCCAATGATGTTCCGGATGCCTTTGTCACCGCTTTCGACAT TTCTTCACAAATGCTCAAATACGCAGGCCACGACCATAACGCACACCTCGTGCAGGCCGATGCAATGTCACTCCCCTACG CCGACAGTTCCTTTGACGTGGTCTTTTCCGTTTTCGGCGCCATCCCCTTTGTGGAGGACTCCGGCACGCTCATGAAGGAA ATCGCGCGCGTCCTCAAACCCGGCGGACGCCTCATTTTCTCCATCACCCACCCGATGCGCTGGATTTTCCTCGACGATCC CGGCCCCGCAGGTCTCACCGCGATCACCAGCTACTTCGACCAGCGCGGCTACGTCGAAGAGGACGAGGAAACCGGTGCGT TAAGCTATGCGGAACAGCACCGCACCATGGGCGCGCGGATTAATGAGCTTATCGACGCCTCCCTCCACTTAGATCACCTC ATCGAACCAGAATGGCCAGATGAGTTGGAAGAAAACTGGGGCCAATGGTCGCCTCTTCGAGGAAAACTCTTCCCCGGGAC AGCAATCTTCCTCGCCACGTACCACCCCTAA
Upstream 100 bases:
>100_bases TCAATGTGCTTTCCTACATGAACACACCGATACATGACGCAACGACACGCCTAATAAACAGTACGCCGTTTGCGCAGCTA GAGCAAATAGAATGGCAAGA
Downstream 100 bases:
>100_bases AAAAAGAAACCAAAGACGCTCATTTTTAAGCTGCCTTTGGCCTGGAATGCACGTTTTTGGTGCTCAGAACTGTCGAATCA GACCAAGCGCTCCCCTAATT
Product: SAM-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MGTDDTDGTNGKTSSHQLSQFSQANRYWWDVDAADYHERHPSYLGTDSAHGEFYWCPEMLHEKDVRLLGTPAALSGKKIL EIGCGSAPCARWLANDVPDAFVTAFDISSQMLKYAGHDHNAHLVQADAMSLPYADSSFDVVFSVFGAIPFVEDSGTLMKE IARVLKPGGRLIFSITHPMRWIFLDDPGPAGLTAITSYFDQRGYVEEDEETGALSYAEQHRTMGARINELIDASLHLDHL IEPEWPDELEENWGQWSPLRGKLFPGTAIFLATYHP
Sequences:
>Translated_276_residues MGTDDTDGTNGKTSSHQLSQFSQANRYWWDVDAADYHERHPSYLGTDSAHGEFYWCPEMLHEKDVRLLGTPAALSGKKIL EIGCGSAPCARWLANDVPDAFVTAFDISSQMLKYAGHDHNAHLVQADAMSLPYADSSFDVVFSVFGAIPFVEDSGTLMKE IARVLKPGGRLIFSITHPMRWIFLDDPGPAGLTAITSYFDQRGYVEEDEETGALSYAEQHRTMGARINELIDASLHLDHL IEPEWPDELEENWGQWSPLRGKLFPGTAIFLATYHP >Mature_275_residues GTDDTDGTNGKTSSHQLSQFSQANRYWWDVDAADYHERHPSYLGTDSAHGEFYWCPEMLHEKDVRLLGTPAALSGKKILE IGCGSAPCARWLANDVPDAFVTAFDISSQMLKYAGHDHNAHLVQADAMSLPYADSSFDVVFSVFGAIPFVEDSGTLMKEI ARVLKPGGRLIFSITHPMRWIFLDDPGPAGLTAITSYFDQRGYVEEDEETGALSYAEQHRTMGARINELIDASLHLDHLI EPEWPDELEENWGQWSPLRGKLFPGTAIFLATYHP
Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014122 - InterPro: IPR004033 [H]
Pfam domain/function: PF01209 Ubie_methyltran [H]
EC number: NA
Molecular weight: Translated: 30794; Mature: 30662
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTDDTDGTNGKTSSHQLSQFSQANRYWWDVDAADYHERHPSYLGTDSAHGEFYWCPEML CCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHCCCCCCCCCCCCCCEEECHHHH HEKDVRLLGTPAALSGKKILEIGCGSAPCARWLANDVPDAFVTAFDISSQMLKYAGHDHN CCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC AHLVQADAMSLPYADSSFDVVFSVFGAIPFVEDSGTLMKEIARVLKPGGRLIFSITHPMR CEEEEECCCCCCCCCCHHHHHHHHHHCCCEECCCCHHHHHHHHHHCCCCEEEEEEECCEE WIFLDDPGPAGLTAITSYFDQRGYVEEDEETGALSYAEQHRTMGARINELIDASLHLDHL EEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC IEPEWPDELEENWGQWSPLRGKLFPGTAIFLATYHP CCCCCCHHHHHCCCCCCCCCCEECCCEEEEEEEECC >Mature Secondary Structure GTDDTDGTNGKTSSHQLSQFSQANRYWWDVDAADYHERHPSYLGTDSAHGEFYWCPEML CCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHCCCCCCCCCCCCCCEEECHHHH HEKDVRLLGTPAALSGKKILEIGCGSAPCARWLANDVPDAFVTAFDISSQMLKYAGHDHN CCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC AHLVQADAMSLPYADSSFDVVFSVFGAIPFVEDSGTLMKEIARVLKPGGRLIFSITHPMR CEEEEECCCCCCCCCCHHHHHHHHHHCCCEECCCCHHHHHHHHHHCCCCEEEEEEECCEE WIFLDDPGPAGLTAITSYFDQRGYVEEDEETGALSYAEQHRTMGARINELIDASLHLDHL EEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC IEPEWPDELEENWGQWSPLRGKLFPGTAIFLATYHP CCCCCCHHHHHCCCCCCCCCCEECCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]