Definition Corynebacterium glutamicum R chromosome, complete genome.
Accession NC_009342
Length 3,314,179

Click here to switch to the map view.

The map label for this gene is ubiE [H]

Identifier: 145295495

GI number: 145295495

Start: 1563939

End: 1564769

Strand: Reverse

Name: ubiE [H]

Synonym: cgR_1423

Alternate gene names: 145295495

Gene position: 1564769-1563939 (Counterclockwise)

Preceding gene: 145295500

Following gene: 145295494

Centisome position: 47.21

GC content: 56.32

Gene sequence:

>831_bases
ATGGGCACAGACGATACTGATGGGACCAATGGGAAAACCTCAAGCCACCAATTGAGCCAGTTCTCTCAAGCAAACCGATA
CTGGTGGGATGTGGACGCGGCCGACTATCACGAACGCCACCCTTCTTATTTAGGCACGGATTCCGCTCACGGCGAGTTCT
ACTGGTGCCCCGAGATGCTGCATGAAAAAGATGTACGTCTTCTTGGCACTCCCGCAGCACTCTCCGGCAAGAAAATTCTA
GAGATCGGTTGCGGCTCAGCACCATGTGCTCGGTGGCTGGCCAATGATGTTCCGGATGCCTTTGTCACCGCTTTCGACAT
TTCTTCACAAATGCTCAAATACGCAGGCCACGACCATAACGCACACCTCGTGCAGGCCGATGCAATGTCACTCCCCTACG
CCGACAGTTCCTTTGACGTGGTCTTTTCCGTTTTCGGCGCCATCCCCTTTGTGGAGGACTCCGGCACGCTCATGAAGGAA
ATCGCGCGCGTCCTCAAACCCGGCGGACGCCTCATTTTCTCCATCACCCACCCGATGCGCTGGATTTTCCTCGACGATCC
CGGCCCCGCAGGTCTCACCGCGATCACCAGCTACTTCGACCAGCGCGGCTACGTCGAAGAGGACGAGGAAACCGGTGCGT
TAAGCTATGCGGAACAGCACCGCACCATGGGCGCGCGGATTAATGAGCTTATCGACGCCTCCCTCCACTTAGATCACCTC
ATCGAACCAGAATGGCCAGATGAGTTGGAAGAAAACTGGGGCCAATGGTCGCCTCTTCGAGGAAAACTCTTCCCCGGGAC
AGCAATCTTCCTCGCCACGTACCACCCCTAA

Upstream 100 bases:

>100_bases
TCAATGTGCTTTCCTACATGAACACACCGATACATGACGCAACGACACGCCTAATAAACAGTACGCCGTTTGCGCAGCTA
GAGCAAATAGAATGGCAAGA

Downstream 100 bases:

>100_bases
AAAAAGAAACCAAAGACGCTCATTTTTAAGCTGCCTTTGGCCTGGAATGCACGTTTTTGGTGCTCAGAACTGTCGAATCA
GACCAAGCGCTCCCCTAATT

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MGTDDTDGTNGKTSSHQLSQFSQANRYWWDVDAADYHERHPSYLGTDSAHGEFYWCPEMLHEKDVRLLGTPAALSGKKIL
EIGCGSAPCARWLANDVPDAFVTAFDISSQMLKYAGHDHNAHLVQADAMSLPYADSSFDVVFSVFGAIPFVEDSGTLMKE
IARVLKPGGRLIFSITHPMRWIFLDDPGPAGLTAITSYFDQRGYVEEDEETGALSYAEQHRTMGARINELIDASLHLDHL
IEPEWPDELEENWGQWSPLRGKLFPGTAIFLATYHP

Sequences:

>Translated_276_residues
MGTDDTDGTNGKTSSHQLSQFSQANRYWWDVDAADYHERHPSYLGTDSAHGEFYWCPEMLHEKDVRLLGTPAALSGKKIL
EIGCGSAPCARWLANDVPDAFVTAFDISSQMLKYAGHDHNAHLVQADAMSLPYADSSFDVVFSVFGAIPFVEDSGTLMKE
IARVLKPGGRLIFSITHPMRWIFLDDPGPAGLTAITSYFDQRGYVEEDEETGALSYAEQHRTMGARINELIDASLHLDHL
IEPEWPDELEENWGQWSPLRGKLFPGTAIFLATYHP
>Mature_275_residues
GTDDTDGTNGKTSSHQLSQFSQANRYWWDVDAADYHERHPSYLGTDSAHGEFYWCPEMLHEKDVRLLGTPAALSGKKILE
IGCGSAPCARWLANDVPDAFVTAFDISSQMLKYAGHDHNAHLVQADAMSLPYADSSFDVVFSVFGAIPFVEDSGTLMKEI
ARVLKPGGRLIFSITHPMRWIFLDDPGPAGLTAITSYFDQRGYVEEDEETGALSYAEQHRTMGARINELIDASLHLDHLI
EPEWPDELEENWGQWSPLRGKLFPGTAIFLATYHP

Specific function: Methyltransferase required for the conversion of dimethylmenaquinone (DMKH2) to menaquinone (MKH2) [H]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. UbiE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014122
- InterPro:   IPR004033 [H]

Pfam domain/function: PF01209 Ubie_methyltran [H]

EC number: NA

Molecular weight: Translated: 30794; Mature: 30662

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTDDTDGTNGKTSSHQLSQFSQANRYWWDVDAADYHERHPSYLGTDSAHGEFYWCPEML
CCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHCCCCCCCCCCCCCCEEECHHHH
HEKDVRLLGTPAALSGKKILEIGCGSAPCARWLANDVPDAFVTAFDISSQMLKYAGHDHN
CCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
AHLVQADAMSLPYADSSFDVVFSVFGAIPFVEDSGTLMKEIARVLKPGGRLIFSITHPMR
CEEEEECCCCCCCCCCHHHHHHHHHHCCCEECCCCHHHHHHHHHHCCCCEEEEEEECCEE
WIFLDDPGPAGLTAITSYFDQRGYVEEDEETGALSYAEQHRTMGARINELIDASLHLDHL
EEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IEPEWPDELEENWGQWSPLRGKLFPGTAIFLATYHP
CCCCCCHHHHHCCCCCCCCCCEECCCEEEEEEEECC
>Mature Secondary Structure 
GTDDTDGTNGKTSSHQLSQFSQANRYWWDVDAADYHERHPSYLGTDSAHGEFYWCPEML
CCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHCCCCCCCCCCCCCCEEECHHHH
HEKDVRLLGTPAALSGKKILEIGCGSAPCARWLANDVPDAFVTAFDISSQMLKYAGHDHN
CCCCCEEEECCCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
AHLVQADAMSLPYADSSFDVVFSVFGAIPFVEDSGTLMKEIARVLKPGGRLIFSITHPMR
CEEEEECCCCCCCCCCHHHHHHHHHHCCCEECCCCHHHHHHHHHHCCCCEEEEEEECCEE
WIFLDDPGPAGLTAITSYFDQRGYVEEDEETGALSYAEQHRTMGARINELIDASLHLDHL
EEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IEPEWPDELEENWGQWSPLRGKLFPGTAIFLATYHP
CCCCCCHHHHHCCCCCCCCCCEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]