| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is gltX
Identifier: 145295434
GI number: 145295434
Start: 1505056
End: 1506546
Strand: Direct
Name: gltX
Synonym: cgR_1371
Alternate gene names: 145295434
Gene position: 1505056-1506546 (Clockwise)
Preceding gene: 145295432
Following gene: 145295439
Centisome position: 45.41
GC content: 56.81
Gene sequence:
>1491_bases ATGGCCTGCATGACTGATGTTCGTGTTCGTTTCTGCCCATCGCCCACCGGCACCCCACACGTTGGACTTGTGCGCACCGC GCTGTTCAACTGGGCATATGCTCGCCACACTGGAGGCAAGTTAGTTTTCCGCATTGAGGACACTGACGCTGCCCGCGATT CCGAGGAGTCTTACTCCGCCATCATCGATTCCCTGCGCTGGTTGGGAATGGACTGGGATGAGGGTGTGGAAAAGGGCGGC CCGCATGAGCCCTACCGCCAGTCGCAGCGCAAGGACATCTATCAGGATGTGCTGAAGCAGCTTATCGACGCCGGCGAGGT CTATCCTGCTTACTCCACTGCCGAAGAGGTTGAGGAGCGACACAAGGCTGCTGGCCGCGATCCTAAGCTTGGCTACGACA ACTTTGACCGTGATCTCACCGAAGAGCAGGTCGCAGCATTTGAGGCTGAGGGGCGTAAGCCTGTGTGGCGTCTGCGCATG CCAGAGCAGGATTGGAAGTGGACTGACCTGGTCCGCGGTGAAGTTGAGTTCAAGTCGTTCACCCAGCCTGACTTCGTGGT TGCTCGTTCCAACGGTGAGCCTTTGTACACCCTGGTCAACCCTGTTGATGATGCGTTGATGGAAGTCACCCATGTGCTGC GTGGTGAGGATCTTTTGCCATCGACTCCTCGTCAGCTTGCTCTGTATGAGGCGCTCAAGCGCATTGGCGTGGCAAAGGTC ACCCCAGCCTTTGGTCACCTGCCATTCGTGATGGGTGAGGGCAACAAGAAGCTGTCTAAGCGTGATCCACAGTCCAGCCT GTTCAACCACCGTGACAACGGCATCATCCCAGAGGGCATGCTCAACTACCTGGCGCTGCTGGGTTGGTCGCTGTCTGCTG ATCAGGACATCTTCGGTGTTGATGAGTTGATCGCTAACTTTGATGTCGCTGACGTATTGGGCAACCCAGCGCGCTTTGAC CAGAAGAAGCTCGAGGCTATCAATGCGGATCACATCCGACTGCTGGAGCCTAAGGATTTCGAGGCTCGCCTGCGCGCGTA CATGACTGAGTACACCGAGTTCCCTGCGGATTACCCAGCTGAGAAGTTTGCCATTGCTGCGGAGCTGGTTCAGACCCGCA TCAAGGTGCTCAGCGAGGCGTGGGATCTGCTGAAGTTCCTGGTCACCGCTGACGAAGATCTGGTGCTCAATGAGAAGGCT GCCAAGAAGAACCTCAAGGAGACCGCTGTTGAGCCTCTCAACGCAGGTATCGCAGCGCTGGAGGCAGTGGAGGAGTGGAC CACTCCAAACATTGAAGCAGCGTTGAACAAGGCTCTCATTGAGGATCTTGGTCTGAAGCCTCGCGTGGCGTTCGGTGCGT TGCGCATTGGTATCTCCGGTGAGGCTGTATCCCCACCACTGTTTGAGTCCATGGAGCTTTTGGGCAAGGAATCCACGTTG GTTCGTCTGAAGGCTACTCGTGAGCAGACCCCATTCGTGGTCGCTGAGTAA
Upstream 100 bases:
>100_bases GTGTTGGGGGCAGAGGGGTTGCGGTGGGCAGACATGGTTAGCCATTCTAATCCCAGTAGAACTGGGGTAAACGCGCGGGC GGTGGGTGCGGGCTATTAAC
Downstream 100 bases:
>100_bases AACCTGTAGATGAACAAAAGCCCGCCTCCGTTCAGAATTTCTGAGGGAGGTAGGCTCTTTGCGTTTCGGATTTAGTTGTG GAGGGAGACGTCGTAACGCA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MACMTDVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGKLVFRIEDTDAARDSEESYSAIIDSLRWLGMDWDEGVEKGG PHEPYRQSQRKDIYQDVLKQLIDAGEVYPAYSTAEEVEERHKAAGRDPKLGYDNFDRDLTEEQVAAFEAEGRKPVWRLRM PEQDWKWTDLVRGEVEFKSFTQPDFVVARSNGEPLYTLVNPVDDALMEVTHVLRGEDLLPSTPRQLALYEALKRIGVAKV TPAFGHLPFVMGEGNKKLSKRDPQSSLFNHRDNGIIPEGMLNYLALLGWSLSADQDIFGVDELIANFDVADVLGNPARFD QKKLEAINADHIRLLEPKDFEARLRAYMTEYTEFPADYPAEKFAIAAELVQTRIKVLSEAWDLLKFLVTADEDLVLNEKA AKKNLKETAVEPLNAGIAALEAVEEWTTPNIEAALNKALIEDLGLKPRVAFGALRIGISGEAVSPPLFESMELLGKESTL VRLKATREQTPFVVAE
Sequences:
>Translated_496_residues MACMTDVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGKLVFRIEDTDAARDSEESYSAIIDSLRWLGMDWDEGVEKGG PHEPYRQSQRKDIYQDVLKQLIDAGEVYPAYSTAEEVEERHKAAGRDPKLGYDNFDRDLTEEQVAAFEAEGRKPVWRLRM PEQDWKWTDLVRGEVEFKSFTQPDFVVARSNGEPLYTLVNPVDDALMEVTHVLRGEDLLPSTPRQLALYEALKRIGVAKV TPAFGHLPFVMGEGNKKLSKRDPQSSLFNHRDNGIIPEGMLNYLALLGWSLSADQDIFGVDELIANFDVADVLGNPARFD QKKLEAINADHIRLLEPKDFEARLRAYMTEYTEFPADYPAEKFAIAAELVQTRIKVLSEAWDLLKFLVTADEDLVLNEKA AKKNLKETAVEPLNAGIAALEAVEEWTTPNIEAALNKALIEDLGLKPRVAFGALRIGISGEAVSPPLFESMELLGKESTL VRLKATREQTPFVVAE >Mature_495_residues ACMTDVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGKLVFRIEDTDAARDSEESYSAIIDSLRWLGMDWDEGVEKGGP HEPYRQSQRKDIYQDVLKQLIDAGEVYPAYSTAEEVEERHKAAGRDPKLGYDNFDRDLTEEQVAAFEAEGRKPVWRLRMP EQDWKWTDLVRGEVEFKSFTQPDFVVARSNGEPLYTLVNPVDDALMEVTHVLRGEDLLPSTPRQLALYEALKRIGVAKVT PAFGHLPFVMGEGNKKLSKRDPQSSLFNHRDNGIIPEGMLNYLALLGWSLSADQDIFGVDELIANFDVADVLGNPARFDQ KKLEAINADHIRLLEPKDFEARLRAYMTEYTEFPADYPAEKFAIAAELVQTRIKVLSEAWDLLKFLVTADEDLVLNEKAA KKNLKETAVEPLNAGIAALEAVEEWTTPNIEAALNKALIEDLGLKPRVAFGALRIGISGEAVSPPLFESMELLGKESTLV RLKATREQTPFVVAE
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=488, Percent_Identity=31.3524590163934, Blast_Score=199, Evalue=4e-51, Organism=Escherichia coli, GI1788743, Length=483, Percent_Identity=33.9544513457557, Blast_Score=264, Evalue=1e-71, Organism=Escherichia coli, GI226510925, Length=314, Percent_Identity=28.343949044586, Blast_Score=98, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71993394, Length=500, Percent_Identity=28.8, Blast_Score=192, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6324540, Length=347, Percent_Identity=36.5994236311239, Blast_Score=213, Evalue=8e-56, Organism=Saccharomyces cerevisiae, GI6321192, Length=230, Percent_Identity=27.8260869565217, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI24665321, Length=487, Percent_Identity=32.0328542094456, Blast_Score=218, Evalue=7e-57,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_CORGB (A4QDQ6)
Other databases:
- EMBL: AP009044 - RefSeq: YP_001138255.1 - ProteinModelPortal: A4QDQ6 - SMR: A4QDQ6 - STRING: A4QDQ6 - GeneID: 4993573 - GenomeReviews: AP009044_GR - KEGG: cgt:cgR_1371 - eggNOG: COG0008 - HOGENOM: HBG628189 - OMA: WINNQYV - ProtClustDB: PRK01406 - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 55663; Mature: 55531
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 260-260
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACMTDVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGKLVFRIEDTDAARDSEESYSA CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH IIDSLRWLGMDWDEGVEKGGPHEPYRQSQRKDIYQDVLKQLIDAGEVYPAYSTAEEVEER HHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH HKAAGRDPKLGYDNFDRDLTEEQVAAFEAEGRKPVWRLRMPEQDWKWTDLVRGEVEFKSF HHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHCCCCHHCCC TQPDFVVARSNGEPLYTLVNPVDDALMEVTHVLRGEDLLPSTPRQLALYEALKRIGVAKV CCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHC TPAFGHLPFVMGEGNKKLSKRDPQSSLFNHRDNGIIPEGMLNYLALLGWSLSADQDIFGV CCCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH DELIANFDVADVLGNPARFDQKKLEAINADHIRLLEPKDFEARLRAYMTEYTEFPADYPA HHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCH EKFAIAAELVQTRIKVLSEAWDLLKFLVTADEDLVLNEKAAKKNLKETAVEPLNAGIAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHH EAVEEWTTPNIEAALNKALIEDLGLKPRVAFGALRIGISGEAVSPPLFESMELLGKESTL HHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEE VRLKATREQTPFVVAE EEEEECCCCCCEEEEC >Mature Secondary Structure ACMTDVRVRFCPSPTGTPHVGLVRTALFNWAYARHTGGKLVFRIEDTDAARDSEESYSA CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHH IIDSLRWLGMDWDEGVEKGGPHEPYRQSQRKDIYQDVLKQLIDAGEVYPAYSTAEEVEER HHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH HKAAGRDPKLGYDNFDRDLTEEQVAAFEAEGRKPVWRLRMPEQDWKWTDLVRGEVEFKSF HHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHCCCCHHCCC TQPDFVVARSNGEPLYTLVNPVDDALMEVTHVLRGEDLLPSTPRQLALYEALKRIGVAKV CCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHC TPAFGHLPFVMGEGNKKLSKRDPQSSLFNHRDNGIIPEGMLNYLALLGWSLSADQDIFGV CCCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHH DELIANFDVADVLGNPARFDQKKLEAINADHIRLLEPKDFEARLRAYMTEYTEFPADYPA HHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCH EKFAIAAELVQTRIKVLSEAWDLLKFLVTADEDLVLNEKAAKKNLKETAVEPLNAGIAAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHH EAVEEWTTPNIEAALNKALIEDLGLKPRVAFGALRIGISGEAVSPPLFESMELLGKESTL HHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEE VRLKATREQTPFVVAE EEEEECCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA