| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145295424
Identifier: 145295424
GI number: 145295424
Start: 1492097
End: 1493842
Strand: Direct
Name: 145295424
Synonym: cgR_1361
Alternate gene names: NA
Gene position: 1492097-1493842 (Clockwise)
Preceding gene: 145295423
Following gene: 145295425
Centisome position: 45.02
GC content: 56.47
Gene sequence:
>1746_bases TTGGCACATCTTGTTTTTCCGGTACGTCGCATTATTGCAACAACCACCACAGCAGTGGTGGCGCTAGGCCTGGTTTCCTG TTCAACGGACAGCAGCCAGGAAGGCGCCAACGGTGCTGCGGAGGTGATGGCGGAGGGCGCGTCGACAAGCGAAGTTGTCG ACGATTCGCCCTACCGCGAAGCGCGCGCTGAAAACGTGGCGCGTGTGGTGTCGGAGGATTTTCCGAGTACCCCGACGGTG ATCAGTGACGCCGACTACTCCGGAATCAAGGCTAGCGAGTTGTTTTTTGCTTCCTCTGACAATGTTGTTGTCGCTGGCAA TGGTATTGCAGAGGAGCTGCGCGCGGCCTCGATCGGTGTGGTTGCGCATGCGCCGGTTCTGCATGCGCGCGGTGATAATA ACGCCGCAGTCATGGCGGAAATTAAGCGTCTCGGCGCTTCAACGGTGTTGTTGATTGGCGATGCGCTGCCAGAACTTCCC AAGGATGAGACGATCACCAAAGTCATTCATGACGACGGTACCGAAGAAGGATTAGCGCAGCTCACCGCTTTGCAATTTGA GACGAAACAGGTTGACACGGTGGAGGATCTGGTTCGGGAAACCGCCAGCCTCACCCCTGAAGATCAAACACTGCTCGTAC CTGCGTGGGGTGGTGTGGCGCCGACGCCTTCCGACGACAAGCTGGCTGCCTTCCCGCTGCAGTCCAAACGTGACGGTGAA ATGTCGCCGATCGTGATTGCCAGCCCAGAATCTGGAATCTCCGCTGTGGCGACTGCGCGTGCATTCGGCGCAGAAATTCG ATTCATGGATTATCCCGACCCGCGATTCAACCAAGAGCAGATGAAGATGGTTGCCGGCCTGGCTGACCGTCCTTTGCTTG CACTCGGTGATCAATTTGGGACCGGCGAACAGCTCGCGGAAAAGATCAAGCGTGGGGAAGAAGTAACCACTGAACTACCC GGCGGTGGAGGACTTGTTTTCCCAGGTCGACGCATGGTGGCACTGTACGGACACCCATCCGGACCAGCTTTAGGCGCACT TGGTGAACAACCAGCCGCCGAAGCCGTGGCGCGCGCGACCGACATGGCTGCGCAGTACCAAGAGTTCGAAGACCAGCCCG TGATTCCGGCATTCGAAGTAATCGCAACGGTTGCCTCTGAATTCGCAGGCGACGACGGCAACTACTCCAACGAATTCCCC GTGGAAGATCTAGTCGGATACGTTGACGCCATCACCGAAGCCGGCGGATACGCAGTCCTGGACCTTCAACCCGGACGCGC CAACTTCCTCGACCAAGCCAAAATGTATGAAGAACTCCTCAAACGACCAAACGTTGGATTGGCGCTAGATCCCGAGTGGA AAATCGGACCCGATGAGCAACCCATGACCCGAGTGGGCTCTGCAGATGCCGCCGAAATCAACGAAGTATCCCAGTGGCTC GCCGACCTGACCGCTGAGAATGATCTGCCGCAAAAGGCATTTGTGCTGCACCAATTTCAATTGGCAATGCTCACCAACCG GGATCAAATCAATACCGATCACCTGGAACTGGCTTTCGTGTTGCACGCAGATGGACACGGAAACGCAGGGGATAAGTACG CAACTTGGAACATGCTTCGCGAGGGACTGAGCCCGAACTACTTCATGGCGTGGAAAAACTTCTACGACGAGGATTTCCCG ACCTTCACTCCGCAACAAACCTATGAAGAGGTCGATCCGCGACCATGGTTTGTGTCGTATCAGTAG
Upstream 100 bases:
>100_bases CACGATGGTCCCGATGCATTTGGAGACGCTGCCGAGGAGTAGTGTCCACCTGCTCGGTTAGGATTGACCGAAAGAGTACT TCAACCTTTAGGACATCCAT
Downstream 100 bases:
>100_bases TTTCGGGGAGCTTCGGGCTCGCTTCTTGGCAATGTAAGCGGTGAGTTAGCTTTCGACCAAACCACACTGCCCACGAATCC TAGAAATGGGATCCGTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: SH3 Type 3 Domain Protein; LigA Protein; Secreted Protein
Number of amino acids: Translated: 581; Mature: 580
Protein sequence:
>581_residues MAHLVFPVRRIIATTTTAVVALGLVSCSTDSSQEGANGAAEVMAEGASTSEVVDDSPYREARAENVARVVSEDFPSTPTV ISDADYSGIKASELFFASSDNVVVAGNGIAEELRAASIGVVAHAPVLHARGDNNAAVMAEIKRLGASTVLLIGDALPELP KDETITKVIHDDGTEEGLAQLTALQFETKQVDTVEDLVRETASLTPEDQTLLVPAWGGVAPTPSDDKLAAFPLQSKRDGE MSPIVIASPESGISAVATARAFGAEIRFMDYPDPRFNQEQMKMVAGLADRPLLALGDQFGTGEQLAEKIKRGEEVTTELP GGGGLVFPGRRMVALYGHPSGPALGALGEQPAAEAVARATDMAAQYQEFEDQPVIPAFEVIATVASEFAGDDGNYSNEFP VEDLVGYVDAITEAGGYAVLDLQPGRANFLDQAKMYEELLKRPNVGLALDPEWKIGPDEQPMTRVGSADAAEINEVSQWL ADLTAENDLPQKAFVLHQFQLAMLTNRDQINTDHLELAFVLHADGHGNAGDKYATWNMLREGLSPNYFMAWKNFYDEDFP TFTPQQTYEEVDPRPWFVSYQ
Sequences:
>Translated_581_residues MAHLVFPVRRIIATTTTAVVALGLVSCSTDSSQEGANGAAEVMAEGASTSEVVDDSPYREARAENVARVVSEDFPSTPTV ISDADYSGIKASELFFASSDNVVVAGNGIAEELRAASIGVVAHAPVLHARGDNNAAVMAEIKRLGASTVLLIGDALPELP KDETITKVIHDDGTEEGLAQLTALQFETKQVDTVEDLVRETASLTPEDQTLLVPAWGGVAPTPSDDKLAAFPLQSKRDGE MSPIVIASPESGISAVATARAFGAEIRFMDYPDPRFNQEQMKMVAGLADRPLLALGDQFGTGEQLAEKIKRGEEVTTELP GGGGLVFPGRRMVALYGHPSGPALGALGEQPAAEAVARATDMAAQYQEFEDQPVIPAFEVIATVASEFAGDDGNYSNEFP VEDLVGYVDAITEAGGYAVLDLQPGRANFLDQAKMYEELLKRPNVGLALDPEWKIGPDEQPMTRVGSADAAEINEVSQWL ADLTAENDLPQKAFVLHQFQLAMLTNRDQINTDHLELAFVLHADGHGNAGDKYATWNMLREGLSPNYFMAWKNFYDEDFP TFTPQQTYEEVDPRPWFVSYQ >Mature_580_residues AHLVFPVRRIIATTTTAVVALGLVSCSTDSSQEGANGAAEVMAEGASTSEVVDDSPYREARAENVARVVSEDFPSTPTVI SDADYSGIKASELFFASSDNVVVAGNGIAEELRAASIGVVAHAPVLHARGDNNAAVMAEIKRLGASTVLLIGDALPELPK DETITKVIHDDGTEEGLAQLTALQFETKQVDTVEDLVRETASLTPEDQTLLVPAWGGVAPTPSDDKLAAFPLQSKRDGEM SPIVIASPESGISAVATARAFGAEIRFMDYPDPRFNQEQMKMVAGLADRPLLALGDQFGTGEQLAEKIKRGEEVTTELPG GGGLVFPGRRMVALYGHPSGPALGALGEQPAAEAVARATDMAAQYQEFEDQPVIPAFEVIATVASEFAGDDGNYSNEFPV EDLVGYVDAITEAGGYAVLDLQPGRANFLDQAKMYEELLKRPNVGLALDPEWKIGPDEQPMTRVGSADAAEINEVSQWLA DLTAENDLPQKAFVLHQFQLAMLTNRDQINTDHLELAFVLHADGHGNAGDKYATWNMLREGLSPNYFMAWKNFYDEDFPT FTPQQTYEEVDPRPWFVSYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62553; Mature: 62422
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHLVFPVRRIIATTTTAVVALGLVSCSTDSSQEGANGAAEVMAEGASTSEVVDDSPYRE CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHCCCCCHHH ARAENVARVVSEDFPSTPTVISDADYSGIKASELFFASSDNVVVAGNGIAEELRAASIGV HHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHEEEECCCCEEEECCCHHHHHHHHHCCE VAHAPVLHARGDNNAAVMAEIKRLGASTVLLIGDALPELPKDETITKVIHDDGTEEGLAQ EECCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHH LTALQFETKQVDTVEDLVRETASLTPEDQTLLVPAWGGVAPTPSDDKLAAFPLQSKRDGE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCC MSPIVIASPESGISAVATARAFGAEIRFMDYPDPRFNQEQMKMVAGLADRPLLALGDQFG CCCEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHCCCCC TGEQLAEKIKRGEEVTTELPGGGGLVFPGRRMVALYGHPSGPALGALGEQPAAEAVARAT CHHHHHHHHHCCCCEEEECCCCCCEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHH DMAAQYQEFEDQPVIPAFEVIATVASEFAGDDGNYSNEFPVEDLVGYVDAITEAGGYAVL HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEE DLQPGRANFLDQAKMYEELLKRPNVGLALDPEWKIGPDEQPMTRVGSADAAEINEVSQWL EECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHH ADLTAENDLPQKAFVLHQFQLAMLTNRDQINTDHLELAFVLHADGHGNAGDKYATWNMLR HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHH EGLSPNYFMAWKNFYDEDFPTFTPQQTYEEVDPRPWFVSYQ HCCCCCEEEEEHHHCCCCCCCCCCHHHHHHCCCCCCEEECC >Mature Secondary Structure AHLVFPVRRIIATTTTAVVALGLVSCSTDSSQEGANGAAEVMAEGASTSEVVDDSPYRE CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHCCCCCHHH ARAENVARVVSEDFPSTPTVISDADYSGIKASELFFASSDNVVVAGNGIAEELRAASIGV HHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHEEEECCCCEEEECCCHHHHHHHHHCCE VAHAPVLHARGDNNAAVMAEIKRLGASTVLLIGDALPELPKDETITKVIHDDGTEEGLAQ EECCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHH LTALQFETKQVDTVEDLVRETASLTPEDQTLLVPAWGGVAPTPSDDKLAAFPLQSKRDGE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCC MSPIVIASPESGISAVATARAFGAEIRFMDYPDPRFNQEQMKMVAGLADRPLLALGDQFG CCCEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHCCCCC TGEQLAEKIKRGEEVTTELPGGGGLVFPGRRMVALYGHPSGPALGALGEQPAAEAVARAT CHHHHHHHHHCCCCEEEECCCCCCEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHH DMAAQYQEFEDQPVIPAFEVIATVASEFAGDDGNYSNEFPVEDLVGYVDAITEAGGYAVL HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEE DLQPGRANFLDQAKMYEELLKRPNVGLALDPEWKIGPDEQPMTRVGSADAAEINEVSQWL EECCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHH ADLTAENDLPQKAFVLHQFQLAMLTNRDQINTDHLELAFVLHADGHGNAGDKYATWNMLR HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHH EGLSPNYFMAWKNFYDEDFPTFTPQQTYEEVDPRPWFVSYQ HCCCCCEEEEEHHHCCCCCCCCCCHHHHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA