| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is ilvB [H]
Identifier: 145295410
GI number: 145295410
Start: 1480917
End: 1482776
Strand: Direct
Name: ilvB [H]
Synonym: cgR_1347
Alternate gene names: 145295410
Gene position: 1480917-1482776 (Clockwise)
Preceding gene: 145295405
Following gene: 145295411
Centisome position: 44.68
GC content: 57.26
Gene sequence:
>1860_bases GTGAATGTGGCAGCTTCTCAACAGCCCACTCCCGCCACGGTTGCAAGCCGTGGTCGATCCGCCGCCCCTGAGCGGATGAC AGGTGCACAGGCAATTGTTCGATCGCTCGAGGAGCTTAACGCCGACATCGTGTTCGGTATTCCTGGTGGTGCGGTGCTAC CGGTGTATGACCCGCTCTATTCCTCCACAAAGGTGCGCCACGTCTTGGTGCGCCACGAGCAGGGCGCAGGCCACGCAGCA ACCGGCTACGCGCAGGTTACTGGACGCGTTGGCGTCTGCATTGCAACCTCTGGCCCAGGAGCAACCAACTTGGTTACCCC AATCGCTGATGCAAACTTGGACTCCGTTCCCATGGTTGCCATCACCGGCCAGGTCGGAAGTGGCCTGCTGGGTACCGACG CTTTCCAGGAAGCCGATATCCGCGGCATCACCATGCCAGTGACCAAGCACAACTTCATGGTCACCGACCCCAACGACATT CCACAGGCATTGGCTGAGGCATTCCACCTCGCGATTACTGGTCGCCCTGGCCCTGTTCTGGTGGATATTCCTAAGGATGT CCAGAACGCTGAATTGGATTTCGTCTGGCCACCAAAGATCGACCTGCCAGGCTACCGCCCAGTTTCAACACCACATGCTC GCCAGATCGAGCAGGCAGTCAAGCTGATCGGTGAGGCCAAGAAGCCCGTCCTTTACGTTGGAGGCGGCGTTATCAAGGCT GACGCACACGAAGAGCTTCGTGCGTTCGCTGAGTACACCGGCATCCCAGTTGTCACCACCTTGATGGCTTTGGGTACTTT CCCAGAGTCTCACGAGCTGCACATGGGTATGCCAGGCATGCATGGCACTGTGTCCGCTGTTGGTGCACTGCAGCGCAGCG ACCTGCTGATTGCTATCGGCTCCCGCTTTGATGACCGCGTCACCGGTGACGTTGACACCTTCGCGCCTGACGCCAAGATC ATTCACGCCGATATTGATCCTGCCGAAATCGGAAAGATCAAGCAGGTTGAGGTTCCAATCGTGGGCGATGCCCGCGAAGT TCTTGCTCGTCTGCTGGAAACCACCAAGGCAAGCAAGGCAGAGACCGAGGACATCTCCGAGTGGGTTGACTACCTCAAGG GCCTCAAGGCACGTTTCCCACGTGGCTACGACGAGCAGCCAGGCGATCTGCTGGCACCACAGTTTGTCATTGAAACCCTG TCCAAGGAAGTTGGCCCCGACGCAATTTACTGCGCCGGCGTCGGACAGCACCAAATGTGGGCAGCTCAGTTCGTTGACTT TGAAAAGCCACGCACCTGGCTCAACTCCGGTGGACTGGGCACCATGGGCTACGCAGTTCCTGCGGCCCTTGGAGCAAAGG CTGGCGCACCTGACAAGGAAGTCTGGGCTATCGACGGCGACGGCTGTTTCCAGATGACCAACCAGGAACTCACCACCGCC GCAGTTGAAGGTTTCCCCATTAAGATCGCACTAATCAACAACGGAAACCTGGGCATGGTTCGCCAATGGCAGACCCTATT CTATGAAGGACGGTACTCAAATACTAAACTTCGTAACCAGGGCGAGTACATGCCCGACTTTGTTGCCCTTTCTGAGGGAC TTGGCTGTGTTGCCATCCGCGTCACCAAAGCGGAGGAAGTACTGCCAGCCATCCAAAAGGCTCGAGAAATCAACGACCGC CCAGTAGTCATCGACTTCATCGTCGGTGAAGACGCACAGGTATGGCCAATGGTGTCTGCTGGATCATCCAACTCCGATAT CCAGTACGCACTCGGATTGCGCCCATTCTTTGACGGCGACGAATCAGCTGCAGAAGACCCTGCAGACATTCATGCTTCCG TTGATTCGACCGAGGCATAA
Upstream 100 bases:
>100_bases ACAATTTTAAATGAGGGCTTTGTCTTTAGGCTGAGTTGAAATCGGCTTGGCTTGGACGGGTCCTGTGAAAATCCTTATTT AGTAAAGGAGCCAGAAAGTC
Downstream 100 bases:
>100_bases GGAGAGACCCAAGATGGCTAATTCTGACGTCACCCGCCACATCCTGTCCGTACTCGTTCAGGACGTAGACGGAATCATTT CCCGCGTATCAGGTATGTTC
Product: acetolactate synthase 1 catalytic subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MNVAASQQPTPATVASRGRSAAPERMTGAQAIVRSLEELNADIVFGIPGGAVLPVYDPLYSSTKVRHVLVRHEQGAGHAA TGYAQVTGRVGVCIATSGPGATNLVTPIADANLDSVPMVAITGQVGSGLLGTDAFQEADIRGITMPVTKHNFMVTDPNDI PQALAEAFHLAITGRPGPVLVDIPKDVQNAELDFVWPPKIDLPGYRPVSTPHARQIEQAVKLIGEAKKPVLYVGGGVIKA DAHEELRAFAEYTGIPVVTTLMALGTFPESHELHMGMPGMHGTVSAVGALQRSDLLIAIGSRFDDRVTGDVDTFAPDAKI IHADIDPAEIGKIKQVEVPIVGDAREVLARLLETTKASKAETEDISEWVDYLKGLKARFPRGYDEQPGDLLAPQFVIETL SKEVGPDAIYCAGVGQHQMWAAQFVDFEKPRTWLNSGGLGTMGYAVPAALGAKAGAPDKEVWAIDGDGCFQMTNQELTTA AVEGFPIKIALINNGNLGMVRQWQTLFYEGRYSNTKLRNQGEYMPDFVALSEGLGCVAIRVTKAEEVLPAIQKAREINDR PVVIDFIVGEDAQVWPMVSAGSSNSDIQYALGLRPFFDGDESAAEDPADIHASVDSTEA
Sequences:
>Translated_619_residues MNVAASQQPTPATVASRGRSAAPERMTGAQAIVRSLEELNADIVFGIPGGAVLPVYDPLYSSTKVRHVLVRHEQGAGHAA TGYAQVTGRVGVCIATSGPGATNLVTPIADANLDSVPMVAITGQVGSGLLGTDAFQEADIRGITMPVTKHNFMVTDPNDI PQALAEAFHLAITGRPGPVLVDIPKDVQNAELDFVWPPKIDLPGYRPVSTPHARQIEQAVKLIGEAKKPVLYVGGGVIKA DAHEELRAFAEYTGIPVVTTLMALGTFPESHELHMGMPGMHGTVSAVGALQRSDLLIAIGSRFDDRVTGDVDTFAPDAKI IHADIDPAEIGKIKQVEVPIVGDAREVLARLLETTKASKAETEDISEWVDYLKGLKARFPRGYDEQPGDLLAPQFVIETL SKEVGPDAIYCAGVGQHQMWAAQFVDFEKPRTWLNSGGLGTMGYAVPAALGAKAGAPDKEVWAIDGDGCFQMTNQELTTA AVEGFPIKIALINNGNLGMVRQWQTLFYEGRYSNTKLRNQGEYMPDFVALSEGLGCVAIRVTKAEEVLPAIQKAREINDR PVVIDFIVGEDAQVWPMVSAGSSNSDIQYALGLRPFFDGDESAAEDPADIHASVDSTEA >Mature_619_residues MNVAASQQPTPATVASRGRSAAPERMTGAQAIVRSLEELNADIVFGIPGGAVLPVYDPLYSSTKVRHVLVRHEQGAGHAA TGYAQVTGRVGVCIATSGPGATNLVTPIADANLDSVPMVAITGQVGSGLLGTDAFQEADIRGITMPVTKHNFMVTDPNDI PQALAEAFHLAITGRPGPVLVDIPKDVQNAELDFVWPPKIDLPGYRPVSTPHARQIEQAVKLIGEAKKPVLYVGGGVIKA DAHEELRAFAEYTGIPVVTTLMALGTFPESHELHMGMPGMHGTVSAVGALQRSDLLIAIGSRFDDRVTGDVDTFAPDAKI IHADIDPAEIGKIKQVEVPIVGDAREVLARLLETTKASKAETEDISEWVDYLKGLKARFPRGYDEQPGDLLAPQFVIETL SKEVGPDAIYCAGVGQHQMWAAQFVDFEKPRTWLNSGGLGTMGYAVPAALGAKAGAPDKEVWAIDGDGCFQMTNQELTTA AVEGFPIKIALINNGNLGMVRQWQTLFYEGRYSNTKLRNQGEYMPDFVALSEGLGCVAIRVTKAEEVLPAIQKAREINDR PVVIDFIVGEDAQVWPMVSAGSSNSDIQYALGLRPFFDGDESAAEDPADIHASVDSTEA
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=484, Percent_Identity=26.2396694214876, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI21361361, Length=591, Percent_Identity=24.5346869712352, Blast_Score=144, Evalue=2e-34, Organism=Escherichia coli, GI87081685, Length=560, Percent_Identity=45.7142857142857, Blast_Score=508, Evalue=1e-145, Organism=Escherichia coli, GI1790104, Length=577, Percent_Identity=44.5407279029463, Blast_Score=463, Evalue=1e-131, Organism=Escherichia coli, GI1786717, Length=564, Percent_Identity=38.6524822695035, Blast_Score=367, Evalue=1e-102, Organism=Escherichia coli, GI1787096, Length=565, Percent_Identity=29.9115044247788, Blast_Score=213, Evalue=3e-56, Organism=Escherichia coli, GI1788716, Length=555, Percent_Identity=27.7477477477477, Blast_Score=178, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17531299, Length=577, Percent_Identity=26.3431542461005, Blast_Score=148, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17531301, Length=577, Percent_Identity=26.3431542461005, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17542570, Length=511, Percent_Identity=26.8101761252446, Blast_Score=135, Evalue=9e-32, Organism=Saccharomyces cerevisiae, GI6323755, Length=609, Percent_Identity=44.0065681444992, Blast_Score=462, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6320816, Length=576, Percent_Identity=23.9583333333333, Blast_Score=97, Evalue=7e-21, Organism=Saccharomyces cerevisiae, GI6323163, Length=494, Percent_Identity=24.8987854251012, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI19922626, Length=554, Percent_Identity=25.6317689530686, Blast_Score=166, Evalue=7e-41,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 66090; Mature: 66090
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVAASQQPTPATVASRGRSAAPERMTGAQAIVRSLEELNADIVFGIPGGAVLPVYDPLY CCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCC SSTKVRHVLVRHEQGAGHAATGYAQVTGRVGVCIATSGPGATNLVTPIADANLDSVPMVA CCCCEEEEEEEECCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEE ITGQVGSGLLGTDAFQEADIRGITMPVTKHNFMVTDPNDIPQALAEAFHLAITGRPGPVL EECCCCCCCCCCCCHHCCCCCEEEEEEECCCEEEECCCHHHHHHHHHHEEEEECCCCCEE VDIPKDVQNAELDFVWPPKIDLPGYRPVSTPHARQIEQAVKLIGEAKKPVLYVGGGVIKA EECCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCEEEC DAHEELRAFAEYTGIPVVTTLMALGTFPESHELHMGMPGMHGTVSAVGALQRSDLLIAIG CCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHCCEEEEEC SRFDDRVTGDVDTFAPDAKIIHADIDPAEIGKIKQVEVPIVGDAREVLARLLETTKASKA CCCCCCCCCCHHHCCCCCEEEEECCCHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCC ETEDISEWVDYLKGLKARFPRGYDEQPGDLLAPQFVIETLSKEVGPDAIYCAGVGQHQMW CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHH AAQFVDFEKPRTWLNSGGLGTMGYAVPAALGAKAGAPDKEVWAIDGDGCFQMTNQELTTA HHHHHCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCHHHHH AVEGFPIKIALINNGNLGMVRQWQTLFYEGRYSNTKLRNQGEYMPDFVALSEGLGCVAIR EECCCEEEEEEEECCCCCHHHHEEHHEECCCCCCCEECCCCCCCCHHHHHHCCCCEEEEE VTKAEEVLPAIQKAREINDRPVVIDFIVGEDAQVWPMVSAGSSNSDIQYALGLRPFFDGD EECHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCCCCC ESAAEDPADIHASVDSTEA CCCCCCCCCEEECCCCCCC >Mature Secondary Structure MNVAASQQPTPATVASRGRSAAPERMTGAQAIVRSLEELNADIVFGIPGGAVLPVYDPLY CCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCCCCC SSTKVRHVLVRHEQGAGHAATGYAQVTGRVGVCIATSGPGATNLVTPIADANLDSVPMVA CCCCEEEEEEEECCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEE ITGQVGSGLLGTDAFQEADIRGITMPVTKHNFMVTDPNDIPQALAEAFHLAITGRPGPVL EECCCCCCCCCCCCHHCCCCCEEEEEEECCCEEEECCCHHHHHHHHHHEEEEECCCCCEE VDIPKDVQNAELDFVWPPKIDLPGYRPVSTPHARQIEQAVKLIGEAKKPVLYVGGGVIKA EECCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCEEEC DAHEELRAFAEYTGIPVVTTLMALGTFPESHELHMGMPGMHGTVSAVGALQRSDLLIAIG CCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEECCCCCCCHHHHHHHHHHHCCEEEEEC SRFDDRVTGDVDTFAPDAKIIHADIDPAEIGKIKQVEVPIVGDAREVLARLLETTKASKA CCCCCCCCCCHHHCCCCCEEEEECCCHHHCCCEEEEEEEECCCHHHHHHHHHHHHCCCCC ETEDISEWVDYLKGLKARFPRGYDEQPGDLLAPQFVIETLSKEVGPDAIYCAGVGQHQMW CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHH AAQFVDFEKPRTWLNSGGLGTMGYAVPAALGAKAGAPDKEVWAIDGDGCFQMTNQELTTA HHHHHCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCHHHHH AVEGFPIKIALINNGNLGMVRQWQTLFYEGRYSNTKLRNQGEYMPDFVALSEGLGCVAIR EECCCEEEEEEEECCCCCHHHHEEHHEECCCCCCCEECCCCCCCCHHHHHHCCCCEEEEE VTKAEEVLPAIQKAREINDRPVVIDFIVGEDAQVWPMVSAGSSNSDIQYALGLRPFFDGD EECHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCCCCC ESAAEDPADIHASVDSTEA CCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8366043; 12948626 [H]