| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yebQ [C]
Identifier: 145295381
GI number: 145295381
Start: 1448711
End: 1449913
Strand: Reverse
Name: yebQ [C]
Synonym: cgR_1319
Alternate gene names: 145295381
Gene position: 1449913-1448711 (Counterclockwise)
Preceding gene: 145295382
Following gene: 145295377
Centisome position: 43.75
GC content: 53.7
Gene sequence:
>1203_bases TTGTTACTGGCCGTTTGGGGCGACAAGTACGGTCCGAAAAATGTCTATGTCGCAGGCATGGTTATCTTCACAGTGAGCTC TTTGGCCTGTGGTTTGGCCCCAGACATGTTCACGTTGATTATCGCTCGTGGCGTTCAAGGTTTGGGCGCAGCCCTTTTGA CTCCACAAACCATGGCAACAATCAACCGCATCTTTGCTTTTGAGCGCCGCGGTGCAGCTCTTGGAGTGTGGGGTTCTACA GCTGGCCTTGCATCCCTAGCAGGACCGATCCTGGGTGGTGTCATCACCGAAAACTGGGGTTGGCAATGGGTCTTCTACAT CAACGTGCCCATCGGCGTGATCTCGGTGATCGCAGTAATGAAGTACGTTCCTGAATTCCCACCGCTGACCCGACCGCTTG ATCCGCTTTCTATCGTGTTGTCCATCGTGGCCGTGTTCTTCCTGGTGTTTGCTTTCCAGGAAGGCGAAGGCGCTGGCTGG GCGGCATGGGTGTGGATCATGATCGTTGCCGCCTTTTCGCTCTTTGCGTGGTTTATTTACCAACAAAGCAGGGCCGAGAA ATCCGGAAACGATCCTCTCGTCCCACTGGAGATTTTCAAGTTTAGAAACTTCAGCCTCGGCAATATCTGCATCATGGCCA TGGGATTCACCGTGGCTGGTACTCCTCTGCCCATCATGTTGTACTTCCAGCAAGCACACGGAATGAACGCCATGGAAGCG GGTTTCATGATGGTTCCTCAAGCTCTCATGGCAGCAGTACTGTCACCATTTGTTGGAAAGCTGGTTGATCGATCCAACCC TGGACTCATGGCAGCCCTCGGTTTTAGCACAGTGGCTGTGTCCATTGTACTGCTGTCAATGGTAATGATTTTCGATACGG GTCTAGTCTGGGCACTTGTTTCGATGACTTTGCTCGGCATCGGAAACGCCTTTGTGTGGGCACCGAACTCGACCTCCACC ATGCGCGACCTGCCACACAAGTTCATGGGAGCGGGCTCTGGCGTGTTCAATACAACCCGCCAATTAGGTTCAGTCATCGG CGCCGCTGCCATCGGAGCAGTAATGCAGATTCGACTGGCAGCAGGCGATGAGGGCGCAGCTTTTGGTCAAGCACTTCTAC TTGCCGCTGCGGTGCTGGTTATCGGCATTGTGGCATCAACGATGGCAGGAAAAAATGCACACCCAGCGCCGGTAAAGCCT TAA
Upstream 100 bases:
>100_bases GCCGTCTCTACCCCAGCGTTACAGGCCGACATGGGCGCGTCCTACAACGAGGTCATCTGGGTAACCTCGGTGTATCTCCT CACTTTCGCGGTGCCACTGC
Downstream 100 bases:
>100_bases AGGTCGCCTGAATCCTTCGACAACATCTCCGACATCACCCGGGCCATGCGATAAGCCTGCGCGGCCTCGGTGATGGTCCC CTGCACCAAATCCTCACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MLLAVWGDKYGPKNVYVAGMVIFTVSSLACGLAPDMFTLIIARGVQGLGAALLTPQTMATINRIFAFERRGAALGVWGST AGLASLAGPILGGVITENWGWQWVFYINVPIGVISVIAVMKYVPEFPPLTRPLDPLSIVLSIVAVFFLVFAFQEGEGAGW AAWVWIMIVAAFSLFAWFIYQQSRAEKSGNDPLVPLEIFKFRNFSLGNICIMAMGFTVAGTPLPIMLYFQQAHGMNAMEA GFMMVPQALMAAVLSPFVGKLVDRSNPGLMAALGFSTVAVSIVLLSMVMIFDTGLVWALVSMTLLGIGNAFVWAPNSTST MRDLPHKFMGAGSGVFNTTRQLGSVIGAAAIGAVMQIRLAAGDEGAAFGQALLLAAAVLVIGIVASTMAGKNAHPAPVKP
Sequences:
>Translated_400_residues MLLAVWGDKYGPKNVYVAGMVIFTVSSLACGLAPDMFTLIIARGVQGLGAALLTPQTMATINRIFAFERRGAALGVWGST AGLASLAGPILGGVITENWGWQWVFYINVPIGVISVIAVMKYVPEFPPLTRPLDPLSIVLSIVAVFFLVFAFQEGEGAGW AAWVWIMIVAAFSLFAWFIYQQSRAEKSGNDPLVPLEIFKFRNFSLGNICIMAMGFTVAGTPLPIMLYFQQAHGMNAMEA GFMMVPQALMAAVLSPFVGKLVDRSNPGLMAALGFSTVAVSIVLLSMVMIFDTGLVWALVSMTLLGIGNAFVWAPNSTST MRDLPHKFMGAGSGVFNTTRQLGSVIGAAAIGAVMQIRLAAGDEGAAFGQALLLAAAVLVIGIVASTMAGKNAHPAPVKP >Mature_400_residues MLLAVWGDKYGPKNVYVAGMVIFTVSSLACGLAPDMFTLIIARGVQGLGAALLTPQTMATINRIFAFERRGAALGVWGST AGLASLAGPILGGVITENWGWQWVFYINVPIGVISVIAVMKYVPEFPPLTRPLDPLSIVLSIVAVFFLVFAFQEGEGAGW AAWVWIMIVAAFSLFAWFIYQQSRAEKSGNDPLVPLEIFKFRNFSLGNICIMAMGFTVAGTPLPIMLYFQQAHGMNAMEA GFMMVPQALMAAVLSPFVGKLVDRSNPGLMAALGFSTVAVSIVLLSMVMIFDTGLVWALVSMTLLGIGNAFVWAPNSTST MRDLPHKFMGAGSGVFNTTRQLGSVIGAAAIGAVMQIRLAAGDEGAAFGQALLLAAAVLVIGIVASTMAGKNAHPAPVKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=374, Percent_Identity=30.2139037433155, Blast_Score=142, Evalue=5e-35, Organism=Escherichia coli, GI1790195, Length=378, Percent_Identity=28.042328042328, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI1789042, Length=362, Percent_Identity=27.0718232044199, Blast_Score=125, Evalue=5e-30, Organism=Escherichia coli, GI1788710, Length=347, Percent_Identity=26.2247838616715, Blast_Score=113, Evalue=2e-26, Organism=Escherichia coli, GI1788392, Length=356, Percent_Identity=28.9325842696629, Blast_Score=111, Evalue=8e-26, Organism=Saccharomyces cerevisiae, GI6323520, Length=420, Percent_Identity=25.4761904761905, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6321663, Length=115, Percent_Identity=33.0434782608696, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42303; Mature: 42303
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAVWGDKYGPKNVYVAGMVIFTVSSLACGLAPDMFTLIIARGVQGLGAALLTPQTMAT CEEEEECCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCHHHCCHHHHHH INRIFAFERRGAALGVWGSTAGLASLAGPILGGVITENWGWQWVFYINVPIGVISVIAVM HHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHH KYVPEFPPLTRPLDPLSIVLSIVAVFFLVFAFQEGEGAGWAAWVWIMIVAAFSLFAWFIY HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH QQSRAEKSGNDPLVPLEIFKFRNFSLGNICIMAMGFTVAGTPLPIMLYFQQAHGMNAMEA HHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEHEECCEECCCCCEEEEEEHHHCCCCHHHH GFMMVPQALMAAVLSPFVGKLVDRSNPGLMAALGFSTVAVSIVLLSMVMIFDTGLVWALV HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMTLLGIGNAFVWAPNSTSTMRDLPHKFMGAGSGVFNTTRQLGSVIGAAAIGAVMQIRLA HHHHHHCCCEEEECCCCCHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEE AGDEGAAFGQALLLAAAVLVIGIVASTMAGKNAHPAPVKP CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLLAVWGDKYGPKNVYVAGMVIFTVSSLACGLAPDMFTLIIARGVQGLGAALLTPQTMAT CEEEEECCCCCCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCHHHCCHHHHHH INRIFAFERRGAALGVWGSTAGLASLAGPILGGVITENWGWQWVFYINVPIGVISVIAVM HHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHH KYVPEFPPLTRPLDPLSIVLSIVAVFFLVFAFQEGEGAGWAAWVWIMIVAAFSLFAWFIY HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH QQSRAEKSGNDPLVPLEIFKFRNFSLGNICIMAMGFTVAGTPLPIMLYFQQAHGMNAMEA HHHHHHCCCCCCCCHHHHHHCCCCCCCCEEEHEECCEECCCCCEEEEEEHHHCCCCHHHH GFMMVPQALMAAVLSPFVGKLVDRSNPGLMAALGFSTVAVSIVLLSMVMIFDTGLVWALV HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMTLLGIGNAFVWAPNSTSTMRDLPHKFMGAGSGVFNTTRQLGSVIGAAAIGAVMQIRLA HHHHHHCCCEEEECCCCCHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEE AGDEGAAFGQALLLAAAVLVIGIVASTMAGKNAHPAPVKP CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]