| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is abcX [H]
Identifier: 145295366
GI number: 145295366
Start: 1434478
End: 1435371
Strand: Direct
Name: abcX [H]
Synonym: cgR_1304
Alternate gene names: 145295366
Gene position: 1434478-1435371 (Clockwise)
Preceding gene: 145295363
Following gene: 145295367
Centisome position: 43.28
GC content: 55.82
Gene sequence:
>894_bases ATGGGAGATGTGACTAACTCTATAAATAACTCTGCAGCTGCATCTTTTCCCTCTGATTCGAGTGAACTCAATGACGAATT CAATGAAGACCTCCTCATCGATTTCCAAGGAGTCTTCTTTAAGAGGGATGGTCGAAACCTCGTCGGCCCCGTCGACTGGC AAGTAGAACTAGATGAACGCTGGGTAATTATCGGACCAAACGGAGCCGGCAAAACCACACTCATCCGCATGGCATCCGCC GAAGAATTCCCCTCCGGAGGAATGGCACGCCTCATGGGAGAACGCATCGGCAAAACTGACATGCGCGACCTCCGCTCCAT GATCGGCGTCAGCTCCTCCGCATTAGGCAACCGAATCCCCTCCGAAGAAAAAGTCTCTGACCTAGTCATCTCCGCAGGCT ACGCAATCCTCGGCCGCTGGCGCGAAGACTACGACGAAATGGACTTCGGACAAGCCACCGAAATCCTCGAACAAGTCGGA GCCATGCACCTAGCCGACCGCACCTGGGGAACCCTCTCCGAAGGCGAACGCAAACGAGTCCTGGTCGCACGCGCACTCAT GACCAACCCGGAACTCCTCATCCTTGACGAACCAACCGCAGGAATGGACCTCGGCGGACGCGAAGACCTCGTCGGCTACC TCGGAGAACTTGCCATGGACCCAGACGCACCTGCCATCGTCATGATCACCCACCACGTCGAAGAAATCCCCGCCGGATTC ACCCACGCAATGCTCCTCGACGAAGGTGAAATCGTAGCCCAAGGCCTGATCAACACCGTCATGACAAACGAGAACCTATC CAAAGCATTCCACCAGCCAATCCAAGTAGATCGCATCGGGGAACGCTACTTTGCCCGCCGTGTGAGAACCGCCAGGAGTC ATAGGGCTCAGTAG
Upstream 100 bases:
>100_bases ATCAAGCAGACACACCGGCAGTTAGCCGGGGGTATGTCTCCATTACGAAAGCTTAATGGAGCTGTGTCACTTCCACACGG AACCGGAGAAATCAGTCAAG
Downstream 100 bases:
>100_bases GTTTTTTGGAGTTGTGGGCCGGTGTTGGAGGGGTGGTTGTTTAATAGGCGACTTCACGTATGCGGACTTCATGTGCGCTG ACTTCTTGCGCTCAACTTCT
Product: hypothetical protein
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MGDVTNSINNSAAASFPSDSSELNDEFNEDLLIDFQGVFFKRDGRNLVGPVDWQVELDERWVIIGPNGAGKTTLIRMASA EEFPSGGMARLMGERIGKTDMRDLRSMIGVSSSALGNRIPSEEKVSDLVISAGYAILGRWREDYDEMDFGQATEILEQVG AMHLADRTWGTLSEGERKRVLVARALMTNPELLILDEPTAGMDLGGREDLVGYLGELAMDPDAPAIVMITHHVEEIPAGF THAMLLDEGEIVAQGLINTVMTNENLSKAFHQPIQVDRIGERYFARRVRTARSHRAQ
Sequences:
>Translated_297_residues MGDVTNSINNSAAASFPSDSSELNDEFNEDLLIDFQGVFFKRDGRNLVGPVDWQVELDERWVIIGPNGAGKTTLIRMASA EEFPSGGMARLMGERIGKTDMRDLRSMIGVSSSALGNRIPSEEKVSDLVISAGYAILGRWREDYDEMDFGQATEILEQVG AMHLADRTWGTLSEGERKRVLVARALMTNPELLILDEPTAGMDLGGREDLVGYLGELAMDPDAPAIVMITHHVEEIPAGF THAMLLDEGEIVAQGLINTVMTNENLSKAFHQPIQVDRIGERYFARRVRTARSHRAQ >Mature_296_residues GDVTNSINNSAAASFPSDSSELNDEFNEDLLIDFQGVFFKRDGRNLVGPVDWQVELDERWVIIGPNGAGKTTLIRMASAE EFPSGGMARLMGERIGKTDMRDLRSMIGVSSSALGNRIPSEEKVSDLVISAGYAILGRWREDYDEMDFGQATEILEQVGA MHLADRTWGTLSEGERKRVLVARALMTNPELLILDEPTAGMDLGGREDLVGYLGELAMDPDAPAIVMITHHVEEIPAGFT HAMLLDEGEIVAQGLINTVMTNENLSKAFHQPIQVDRIGERYFARRVRTARSHRAQ
Specific function: Part Of The Binding-Protein-Dependent Transport System For Ferric Enterobactin. Probably Responsible For Energy Coupling To The Transport System. [C]
COG id: COG1119
COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI27881501, Length=191, Percent_Identity=26.7015706806283, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI30795238, Length=191, Percent_Identity=26.7015706806283, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI46592964, Length=239, Percent_Identity=26.3598326359833, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI46592915, Length=239, Percent_Identity=26.3598326359833, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI46592956, Length=239, Percent_Identity=26.3598326359833, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI46592898, Length=239, Percent_Identity=26.3598326359833, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI46592971, Length=239, Percent_Identity=26.3598326359833, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI46592978, Length=239, Percent_Identity=26.3598326359833, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI45446740, Length=203, Percent_Identity=26.6009852216749, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI47078218, Length=203, Percent_Identity=26.6009852216749, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI150417984, Length=198, Percent_Identity=27.7777777777778, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1786803, Length=211, Percent_Identity=31.7535545023697, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1786975, Length=221, Percent_Identity=30.316742081448, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1786319, Length=202, Percent_Identity=31.6831683168317, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1787089, Length=203, Percent_Identity=32.0197044334975, Blast_Score=85, Evalue=6e-18, Organism=Escherichia coli, GI1788761, Length=189, Percent_Identity=30.1587301587302, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788225, Length=233, Percent_Identity=28.3261802575107, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1789593, Length=230, Percent_Identity=30.4347826086957, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1788165, Length=225, Percent_Identity=27.5555555555556, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1786345, Length=254, Percent_Identity=24.8031496062992, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789864, Length=254, Percent_Identity=24.0157480314961, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1787029, Length=235, Percent_Identity=26.3829787234043, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1790739, Length=208, Percent_Identity=28.3653846153846, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI87081709, Length=216, Percent_Identity=26.3888888888889, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788450, Length=201, Percent_Identity=30.3482587064677, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1786253, Length=216, Percent_Identity=25.462962962963, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1788506, Length=251, Percent_Identity=28.2868525896414, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI87081791, Length=233, Percent_Identity=26.6094420600858, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1786872, Length=191, Percent_Identity=28.7958115183246, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788897, Length=223, Percent_Identity=25.5605381165919, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI87081834, Length=185, Percent_Identity=28.6486486486486, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1790544, Length=219, Percent_Identity=26.9406392694064, Blast_Score=65, Evalue=8e-12, Organism=Escherichia coli, GI1786398, Length=241, Percent_Identity=25.7261410788382, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI87081782, Length=208, Percent_Identity=27.8846153846154, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1787112, Length=278, Percent_Identity=24.4604316546763, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1789891, Length=230, Percent_Identity=25.6521739130435, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787758, Length=213, Percent_Identity=25.8215962441315, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1787041, Length=222, Percent_Identity=30.1801801801802, Blast_Score=62, Evalue=7e-11, Organism=Escherichia coli, GI1789962, Length=219, Percent_Identity=24.6575342465753, Blast_Score=61, Evalue=7e-11, Organism=Escherichia coli, GI1787370, Length=237, Percent_Identity=24.0506329113924, Blast_Score=61, Evalue=9e-11, Organism=Caenorhabditis elegans, GI115533608, Length=174, Percent_Identity=29.8850574712644, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71983516, Length=233, Percent_Identity=27.0386266094421, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71983523, Length=233, Percent_Identity=27.0386266094421, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71983510, Length=233, Percent_Identity=27.0386266094421, Blast_Score=72, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6320266, Length=239, Percent_Identity=29.7071129707113, Blast_Score=74, Evalue=3e-14, Organism=Drosophila melanogaster, GI161076684, Length=219, Percent_Identity=25.1141552511416, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24581617, Length=219, Percent_Identity=25.1141552511416, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24581615, Length=219, Percent_Identity=25.1141552511416, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI161076682, Length=219, Percent_Identity=25.1141552511416, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI28574744, Length=256, Percent_Identity=24.609375, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI85724858, Length=203, Percent_Identity=30.5418719211823, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI85724856, Length=203, Percent_Identity=30.5418719211823, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24580547, Length=203, Percent_Identity=30.5418719211823, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24580551, Length=203, Percent_Identity=30.5418719211823, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24580549, Length=203, Percent_Identity=30.5418719211823, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24580545, Length=203, Percent_Identity=30.5418719211823, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24643674, Length=219, Percent_Identity=27.3972602739726, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 32777; Mature: 32646
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDVTNSINNSAAASFPSDSSELNDEFNEDLLIDFQGVFFKRDGRNLVGPVDWQVELDER CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCEEEEECCCCCCCCCCEEEEECCE WVIIGPNGAGKTTLIRMASAEEFPSGGMARLMGERIGKTDMRDLRSMIGVSSSALGNRIP EEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCC SEEKVSDLVISAGYAILGRWREDYDEMDFGQATEILEQVGAMHLADRTWGTLSEGERKRV CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH LVARALMTNPELLILDEPTAGMDLGGREDLVGYLGELAMDPDAPAIVMITHHVEEIPAGF HHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCC THAMLLDEGEIVAQGLINTVMTNENLSKAFHQPIQVDRIGERYFARRVRTARSHRAQ EEEEEECCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GDVTNSINNSAAASFPSDSSELNDEFNEDLLIDFQGVFFKRDGRNLVGPVDWQVELDER CCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCEEEEECCCCCCCCCCEEEEECCE WVIIGPNGAGKTTLIRMASAEEFPSGGMARLMGERIGKTDMRDLRSMIGVSSSALGNRIP EEEECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCC SEEKVSDLVISAGYAILGRWREDYDEMDFGQATEILEQVGAMHLADRTWGTLSEGERKRV CHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH LVARALMTNPELLILDEPTAGMDLGGREDLVGYLGELAMDPDAPAIVMITHHVEEIPAGF HHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEHHHHHCCCCC THAMLLDEGEIVAQGLINTVMTNENLSKAFHQPIQVDRIGERYFARRVRTARSHRAQ EEEEEECCCHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11029425; 12397186 [H]