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The map label for this gene is ssuC [H]

Identifier: 145295361

GI number: 145295361

Start: 1427286

End: 1428056

Strand: Direct

Name: ssuC [H]

Synonym: cgR_1299

Alternate gene names: 145295361

Gene position: 1427286-1428056 (Clockwise)

Preceding gene: 145295360

Following gene: 145295362

Centisome position: 43.07

GC content: 58.5

Gene sequence:

>771_bases
ATGACTACAACCTTGACTCGCCCCAAAATCGCGCTGCCCGCGCGCATCTATTCGCCGCTTGCGGTGCTTGTTTTCTGGCA
GCTCGGCTCGAGCCTGGGCGCCATCCCGGAGCGGATTCTGCCGGCACCCACCACGATCTTGGCCGCCGGCTGGGAGGTCG
CCACAAATGGCACGCTTCTCGACGCACTCCTCGTCTCAAGTCAACGCGTCCTTCTAGGCTTCGCCCTGGGTGCTGTCCTA
GGAATTTCCCTTGGTGTTTTGACGGGCATGTTCAGATTTGCAGACACCGCCGTTGATCCGCTCATTCAAGCTGCCCGCGC
GCTGCCTCACCTGGGTCTTGTGCCGCTGTTTATCATCTGGTTCGGTATCGGTGAGCTGCCGAAAGTACTGATTATTAGCC
TCGGCGTGCTGTATCCGCTGTACCTCAACACCGCCAGCGGGTTCAGACAAATCGATCCAAAGCTTCTGGAAGCCGGCCAC
GTGATGGGCTTCGGATTTTTCCAGAGGTTGCGGACCATCATCATTCCTTCTGCCGCGCCGCAACTTTTTGTCGGCCTGCG
CCAAGCAAGTGCGGCCGCCTGGCTCTCACTGATCGTGGCGGAACAGGTCAACGCCCGCGAAGGACTCGGCTTCCTCATCA
ACAATGCGCGCGATTTTTACCGCACTGACCTCGTTATTTTCGGCCTCATTGTCTACGCCACCCTCGGTCTGCTGTCTGAA
GCGCTGATCAGAGCTTGGGAACGTCACACCTTCCGCTACCGAAACGCATAA

Upstream 100 bases:

>100_bases
GCGGTGTGGATATCAAAAATCAGGAATCACGAGTTTTGGAACCTGTTGGGTAAACGGGAAGAACGAGACGTCGATAAGCA
AATTTCTTAAGGAACCTGAC

Downstream 100 bases:

>100_bases
GAAAGTTGCTCGCCATGACTGCCACATTGTCACTCAAACCCGCAGCCATCGTCCGTGGATTGCGCAAATCTTACGGAACC
AAAGAAGTCCTCCAAGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MTTTLTRPKIALPARIYSPLAVLVFWQLGSSLGAIPERILPAPTTILAAGWEVATNGTLLDALLVSSQRVLLGFALGAVL
GISLGVLTGMFRFADTAVDPLIQAARALPHLGLVPLFIIWFGIGELPKVLIISLGVLYPLYLNTASGFRQIDPKLLEAGH
VMGFGFFQRLRTIIIPSAAPQLFVGLRQASAAAWLSLIVAEQVNAREGLGFLINNARDFYRTDLVIFGLIVYATLGLLSE
ALIRAWERHTFRYRNA

Sequences:

>Translated_256_residues
MTTTLTRPKIALPARIYSPLAVLVFWQLGSSLGAIPERILPAPTTILAAGWEVATNGTLLDALLVSSQRVLLGFALGAVL
GISLGVLTGMFRFADTAVDPLIQAARALPHLGLVPLFIIWFGIGELPKVLIISLGVLYPLYLNTASGFRQIDPKLLEAGH
VMGFGFFQRLRTIIIPSAAPQLFVGLRQASAAAWLSLIVAEQVNAREGLGFLINNARDFYRTDLVIFGLIVYATLGLLSE
ALIRAWERHTFRYRNA
>Mature_255_residues
TTTLTRPKIALPARIYSPLAVLVFWQLGSSLGAIPERILPAPTTILAAGWEVATNGTLLDALLVSSQRVLLGFALGAVLG
ISLGVLTGMFRFADTAVDPLIQAARALPHLGLVPLFIIWFGIGELPKVLIISLGVLYPLYLNTASGFRQIDPKLLEAGHV
MGFGFFQRLRTIIIPSAAPQLFVGLRQASAAAWLSLIVAEQVNAREGLGFLINNARDFYRTDLVIFGLIVYATLGLLSEA
LIRAWERHTFRYRNA

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=240, Percent_Identity=40.4166666666667, Blast_Score=174, Evalue=5e-45,
Organism=Escherichia coli, GI1786564, Length=233, Percent_Identity=31.7596566523605, Blast_Score=111, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 27834; Mature: 27703

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTLTRPKIALPARIYSPLAVLVFWQLGSSLGAIPERILPAPTTILAAGWEVATNGTLL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCCCEECCCCHHH
DALLVSSQRVLLGFALGAVLGISLGVLTGMFRFADTAVDPLIQAARALPHLGLVPLFIIW
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
FGIGELPKVLIISLGVLYPLYLNTASGFRQIDPKLLEAGHVMGFGFFQRLRTIIIPSAAP
HHHCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHCHHHHHHHHHHHHHHHCCCCCH
QLFVGLRQASAAAWLSLIVAEQVNAREGLGFLINNARDFYRTDLVIFGLIVYATLGLLSE
HHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
ALIRAWERHTFRYRNA
HHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTTLTRPKIALPARIYSPLAVLVFWQLGSSLGAIPERILPAPTTILAAGWEVATNGTLL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCCCEECCCCHHH
DALLVSSQRVLLGFALGAVLGISLGVLTGMFRFADTAVDPLIQAARALPHLGLVPLFIIW
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
FGIGELPKVLIISLGVLYPLYLNTASGFRQIDPKLLEAGHVMGFGFFQRLRTIIIPSAAP
HHHCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHCHHHHHHHHHHHHHHHCCCCCH
QLFVGLRQASAAAWLSLIVAEQVNAREGLGFLINNARDFYRTDLVIFGLIVYATLGLLSE
HHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
ALIRAWERHTFRYRNA
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]